BAC Information

Click to search

BAC

Clone NameB6Ng01-243I22
Chromosome2 (Build37)
Map Location 88,354,825 - 88,478,361
singlet/doubletdoublet
Overlap geneOlfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1
Upstream geneLOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1
Downstream geneOlfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243I22.bB6Ng01-243I22.g
ACCGA052910GA052911
length1,124999
definitionB6Ng01-243I22.b B6Ng01-243I22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,477,217 - 88,478,361)(88,354,825 - 88,355,695)
sequence
gaattcttttaatacacatgaaagcaattgtgcaaaggtttacaacaacc
tcaaacttagtatcgttagtcttttagtatggtattgagctgttttaatt
ctttataatacctttcatttatagaggatctaagaaagtgaaatataact
cttcatgtatttgatgttttactgtctttatcgtaaataagtctctgtta
gatctcaattttaaagaatactttattgtatttttttgttgttcatgtgt
tagcatgtttgtgagagtgtgtgcacttgacagcatgtgaaaataaacat
gaccggtcaacttcgggaactgcatgtctctttccactatacgggaccag
aaaaagagctcaggatattatgcttggtggttgaagccttcctccataag
tcatcctaccagtcctgacgtctcttgtgtattgtgtatttgagtgtgtg
tgagtccaccatgactgtgaactgttagcttgccttattagttactctct
cattctcttactggaagcctttacacaaaaggtttgttttatagttgttt
cagaaacactgagttattaaatatcacaatcacttttgctgcagagacaa
cattatttgataagattacctattgttgactttctaagtgctaatcaagt
taacataatcatataacatatccaggggaggtggttttgtttggtttgtt
attaactctaatacatacttggctgttatgagagttctctgttttttatt
ccacagaattgtcagcaatgttttctttttaatttatttatccacttttt
cctctcctcccagcctgaccttcaaaatttctaatctctattagccactc
agagaaaggaaactccatccaccacccatgaagtagggaccaaaccatcc
tccaatatctactccaagcaggaatatgcacatcctataccactgagcca
gacatgcgtccccctagttagaggatccaaagcggcacagagtcaagaca
cccatgatccattttaggacctgcatgagaccagctgctatattgtgtag
aggcctatgcatccctctttggttgtgatcatacctgtgtgcccttatgg
ccagagtagtcagtctctaagtaa
gaattcctgatctttccaagacttttcacatgacgggatgttcagtttta
tcaaatgctttttcagcgttgaatgaaagaataatgtggtttttttcccc
ttgagtttgtttatgtaatagattacattgatagatttacatatattgag
ccatccctgcatccatgggatgaagcctgcttgatcatggtttatggtgg
ttttcgtactacttggacagatatcaacaaaataccatcatataaaacag
tacaaatgcatttgaaataagtggatggaaattgaaagatgatattaaaa
tatgtaggtggaataatgaggccataggactttataaagcacattttaat
ctttttaaaaatttgttgtatgtgtactcatccctttccttccttcaaat
tctccaaaatgcttctcccagctctccttcaaattcactttgtacattgt
tattgcatgaatatttgtatttgtataaacatctgcattgctaaatataa
cctgatgaatccatataatattatgtggatttatgttttcatgtcacact
ataccactgggacacctgctcaactaagttcatagcagctttattcataa
tagccagaactggaaacaacctagatgttcctcaaatgaagaatggatga
agaaactgtggtacatatactcaatgaaatactacttagctactaataac
aaggacatcatgaaatttgcaggaaaacggacagagctagaaaacattat
tctgagaaagctaactgaaatccagaaaaaagaaaatgcatagtattcac
tcacttataagtaggattgatcaaaaagtacaagataaccattctacatt
tcacagatccccccccctccaaaaaaaaaaaaccctaagtactacgggca
gctcaagggaggatacttgaatctcactccgaagtgaaaataaatagtca
ttggaagaggatggatgtagggaaccgaatagcagtagagatgagcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88477217_88478361
seq2: B6Ng01-243I22.b_44_1167 (reverse)

seq1  TTACCTAGAGACTGACTACTCTTGGCCCATAGGGGCACACAGTTATTGAT  50
      |||| |||||||||||||||||  | ||||| |||||||||| || ||||
seq2  TTACTTAGAGACTGACTACTCT--GGCCATAAGGGCACACAGGTA-TGAT  47

seq1  CCACCAACCAAAGA-GGATGCATAGGCTTCCTACACAATTATAGCAGCTT  99
      |   |||||||||| |||||||||||| | |||||||| ||||||||| |
seq2  C--ACAACCAAAGAGGGATGCATAGGCCT-CTACACAA-TATAGCAGC-T  92

seq1  GGTCTTCATGCAGGTCCCCTAAAAATTGGATCATGGGTTGTCTTTGACTC  149
      |||| ||||||||||  |||||||  ||||||||||| |||| |||||||
seq2  GGTC-TCATGCAGGT--CCTAAAA--TGGATCATGGG-TGTC-TTGACTC  135

seq1  TGTTGCCCGCTTTGGATCCTCTTACCTTAGGGGGACGCCATGTCTGGCCT  199
      |||   |||||||||||||||| ||  |||||||||| ||||||||| ||
seq2  TGT--GCCGCTTTGGATCCTCTAAC--TAGGGGGACG-CATGTCTGG-CT  179

seq1  CAGTGGTATAGGATGTGCATATTCCTGCTTGGAGTAGATATTGGAGGATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTATAGGATGTGCATATTCCTGCTTGGAGTAGATATTGGAGGATG  229

seq1  GTTTGGTCCCTACTTCATGGGTGGTGGATGGAGTTTCCCCTTCTCTGAGT  299
      |||||||||||||||||||||||||||||||||||| || ||||||||||
seq2  GTTTGGTCCCTACTTCATGGGTGGTGGATGGAGTTT-CCTTTCTCTGAGT  278

seq1  GGCTAATAGAGATTAGAAATTTTGAAGGTCAGGCTGGGAGGAGAGGAAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAATAGAGATTAGAAATTTTGAAGGTCAGGCTGGGAGGAGAGGAAAA  328

seq1  AGTGGATAAATAAATTAAAAAGAAAACATTGCTGACAATTCTGTGGAATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATAAATAAATTAAAAAGAAAACATTGCTGACAATTCTGTGGAATA  378

seq1  AAAAACAGAGAACTCTCATAACAGCCAAGTATGTATTAGAGTTAATAACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGAGAACTCTCATAACAGCCAAGTATGTATTAGAGTTAATAACA  428

seq1  AACCAAACAAAACCACCTCCCCTGGATATGTTATATGATTATGTTAACTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACAAAACCACCTCCCCTGGATATGTTATATGATTATGTTAACTT  478

seq1  GATTAGCACTTAGAAAGTCAACAATAGGTAATCTTATCAAATAATGTTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGCACTTAGAAAGTCAACAATAGGTAATCTTATCAAATAATGTTGT  528

seq1  CTCTGCAGCAAAAGTGATTGTGATATTTAATAACTCAGTGTTTCTGAAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAGCAAAAGTGATTGTGATATTTAATAACTCAGTGTTTCTGAAAC  578

seq1  AACTATAAAACAAACCTTTTGTGTAAAGGCTTCCAGTAAGAGAATGAGAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAAAACAAACCTTTTGTGTAAAGGCTTCCAGTAAGAGAATGAGAG  628

seq1  AGTAACTAATAAGGCAAGCTAACAGTTCACAGTCATGGTGGACTCACACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTAATAAGGCAAGCTAACAGTTCACAGTCATGGTGGACTCACACA  678

seq1  CACTCAAATACACAATACACAAGAGACGTCAGGACTGGTAGGATGACTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAAATACACAATACACAAGAGACGTCAGGACTGGTAGGATGACTTA  728

seq1  TGGAGGAAGGCTTCAACCACCAAGCATAATATCCTGAGCTCTTTTTCTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAGGCTTCAACCACCAAGCATAATATCCTGAGCTCTTTTTCTGG  778

seq1  TCCCGTATAGTGGAAAGAGACATGCAGTTCCCGAAGTTGACCGGTCATGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTATAGTGGAAAGAGACATGCAGTTCCCGAAGTTGACCGGTCATGT  828

seq1  TTATTTTCACATGCTGTCAAGTGCACACACTCTCACAAACATGCTAACAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCACATGCTGTCAAGTGCACACACTCTCACAAACATGCTAACAC  878

seq1  ATGAACAACAAAAAAATACAATAAAGTATTCTTTAAAATTGAGATCTAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAACAAAAAAATACAATAAAGTATTCTTTAAAATTGAGATCTAAC  928

seq1  AGAGACTTATTTACGATAAAGACAGTAAAACATCAAATACATGAAGAGTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTTATTTACGATAAAGACAGTAAAACATCAAATACATGAAGAGTT  978

seq1  ATATTTCACTTTCTTAGATCCTCTATAAATGAAAGGTATTATAAAGAATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCACTTTCTTAGATCCTCTATAAATGAAAGGTATTATAAAGAATT  1028

seq1  AAAACAGCTCAATACCATACTAAAAGACTAACGATACTAAGTTTGAGGTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCTCAATACCATACTAAAAGACTAACGATACTAAGTTTGAGGTT  1078

seq1  GTTGTAAACCTTTGCACAATTGCTTTCATGTGTATTAAAAGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAAACCTTTGCACAATTGCTTTCATGTGTATTAAAAGAATTC  1124

seq1: chr2_88354825_88355695
seq2: B6Ng01-243I22.g_64_935

seq1  GAATTCCTGATCTTTCCAAGACTTTTCACATGACGGGATGTTCAGTTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCTTTCCAAGACTTTTCACATGACGGGATGTTCAGTTTTA  50

seq1  TCAAATGCTTTTTCAGCGTTGAATGAAAGAATAATGTGGTTTTTTTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGCTTTTTCAGCGTTGAATGAAAGAATAATGTGGTTTTTTTCCCC  100

seq1  TTGAGTTTGTTTATGTAATAGATTACATTGATAGATTTACATATATTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTTGTTTATGTAATAGATTACATTGATAGATTTACATATATTGAG  150

seq1  CCATCCCTGCATCCATGGGATGAAGCCTGCTTGATCATGGTTTATGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCTGCATCCATGGGATGAAGCCTGCTTGATCATGGTTTATGGTGG  200

seq1  TTTTCGTACTACTTGGACAGATATCAACAAAATACCATCATATAAAACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCGTACTACTTGGACAGATATCAACAAAATACCATCATATAAAACAG  250

seq1  TACAAATGCATTTGAAATAAGTGGATGGAAATTGAAAGATGATATTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATGCATTTGAAATAAGTGGATGGAAATTGAAAGATGATATTAAAA  300

seq1  TATGTAGGTGGAATAATGAGGCCATAGGACTTTATAAAGCACATTTTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGGTGGAATAATGAGGCCATAGGACTTTATAAAGCACATTTTAAT  350

seq1  CTTTTTAAAAATTTGTTGTATGTGTACTCATCCCTTTCCTTCCTTCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAAAATTTGTTGTATGTGTACTCATCCCTTTCCTTCCTTCAAAT  400

seq1  TCTCCAAAATGCTTCTCCCAGCTCTCCTTCAAATTCACTTTGTACATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAAAATGCTTCTCCCAGCTCTCCTTCAAATTCACTTTGTACATTGT  450

seq1  TATTGCATGAATATTTGTATTTGTATAAACATCTGCATTGCTAAATATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCATGAATATTTGTATTTGTATAAACATCTGCATTGCTAAATATAA  500

seq1  CCTGATGAATCCATATAATATTATGTGGATTTATGTTTTCATGTCACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGAATCCATATAATATTATGTGGATTTATGTTTTCATGTCACACT  550

seq1  ATACCACTGGGACACCTGCTCAACTAAGTTCATAGCAGCTTTATTCATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCACTGGGACACCTGCTCAACTAAGTTCATAGCAGCTTTATTCATAA  600

seq1  TAGCCAGAACTGGAAACAACCTAGATGTTCCTCAAATGAAGAATGGATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGAACTGGAAACAACCTAGATGTTCCTCAAATGAAGAATGGATGA  650

seq1  AGAAACTGTGGTACATATACTCAATGAAATACTACTTAGCTACTAATAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTGTGGTACATATACTCAATGAAATACTACTTAGCTACTAATAAC  700

seq1  AAGGACATCATGAAATTTGCAGGAAAACGGACAGAGCTAGAAAACATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACATCATGAAATTTGCAGGAAAACGGACAGAGCTAGAAAACATTAT  750

seq1  TCTGAGAAAGCTAACTGAAATCCAGAAAAAAGAAAATGCATAGTATTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAAAGCTAACTGAAATCCAGAAAAAAGAAAATGCATAGTATTCAC  800

seq1  TCACTTATAAGTAGGATTGATCAAAAAGTACAAGATAACCATTCTACATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTATAAGTAGGATTGATCAAAAAGTACAAGATAACCATTCTACATT  850

seq1  TCACAGATCCCCCCCCC-CCAA  871
      ||||||||||||||||| ||||
seq2  TCACAGATCCCCCCCCCTCCAA  872