BAC Information

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BAC

Clone NameB6Ng01-244A20
Chromosome2 (Build37)
Map Location 80,691,920 - 80,693,077
singlet/doubletsinglet
Overlap genenone
Upstream genePde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324
Downstream geneLOC668027, LOC100040624, LOC100040655, LOC100040704
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244A20.bB6Ng01-244A20.g
ACCGA053281GA053282
length1,165471
definitionB6Ng01-244A20.b B6Ng01-244A20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcaaacagtttgcacttccctgctatcaaatgtcaaggctaac
ggcacaccttcctgtggttcctcttaagttcaactctgaaaaaagatgaa
caacaacaaaaatagttaaggctagctttgaaattctaaaatgaaaggca
cacacacagagatgaaatttaaaggaaagtggacagaataaattacccct
ttaacaaatgaaattatacaaaggagatgaactaaaagtaatggctgcaa
ttattcagtaggaaaccgcgctgccatctcctggggaggaggggatttta
atgttctccttcccagtagtacctagaaacacctctaatgctcagtatta
ccctggggtgtaagcatgttggccggagagaagtttaattcattatgtgc
ttgccgacgtactcaccacactgttggtaaaatttctatgtggaaggaaa
ctatttggttcatatccagttgccttgcacacaatgtatgacaactggat
ataggcttattgcattgataaagcttctattactggtgaagtgactggta
gtaaatttctatcacaaacagcttgctcctgctgtctagaaagttgcttg
cgagtacttaggagttaaatagaaggcactgtagttgcagtccgaaaatt
ttcttacttactcaaatatgttatccattcaatagacattgtctgtgcca
gctatgtgccgacccgtgagctctggaagctcccagaataattgactgac
tgataagccaatatgacttgtacctttaagagtacgtagaccaagtgtta
gctcatgaacagttaaatatttatagcttgagacctgaagagcgtttctg
tccaccctggggcttctacttctgggcagagatgagagcaaaatagctga
aggcttgagaatataaagaaacgtaacagtttaccttataaatgcaaaaa
caagcagaataaaaatggtcctctgtaacattttctatgggaataaattt
cccaaagcatgctgcagtaaacacccggctcttctccagtgcaacctatt
aaaggagcttggtggaggtggtcagtgacctctaacacacgtccatttgc
caatttcttggtatagattttgcctacctccttgccccacctctgaaccc
taatttgccaagctc
ctgtatctaaggctcagggatcatgtggaagaggaggcagactgattgta
agagccacaggaacaggaaatttgctatgagatatttgtcttagaaatgt
caaggaagctacacccatgaagtctcaacaacttggctgcttcaaaagct
gagcaaggaccataccaataggcatattattatggaatggagaatcctta
ggggaccccactcctagacagagcactgcagatgacaaagtaattctgag
tgggagaaatagtcttctctagggaagagacccccagttggttatctaat
acaaaatgattagtcctgaaataatacacatatggttaacattgtatgtg
cttatgtcatagcaggctgatttatacatttatgaatatgtgtataagca
atgaagaaatagaggctatgaatatgagagagaacaaggaagggagtgaa
tgagatgggttggagggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_80691920_80693077
seq2: B6Ng01-244A20.b_45_1209 (reverse)

seq1  GAGCTTTGCAATTTAGGGGTCAGGGGTGGGGCAGGAGGGTAAGGCAAAAT  50
      |||||| |||| |||||| |||| ||||||||| |  ||| |||||||||
seq2  GAGCTTGGCAAATTAGGGTTCAGAGGTGGGGCAAGGAGGT-AGGCAAAAT  49

seq1  CATTCCCAAGGAAATGGC-AATGGACGTGTGTAGGAGGTCACTGACCA-C  98
      |  | ||||| || |||| |||||||||||||  |||||||||||||| |
seq2  CTATACCAAGAAATTGGCAAATGGACGTGTGTTAGAGGTCACTGACCACC  99

seq1  TC--ACAAGCTCTTTAAATAGGTTGCACTGGGAGAAGAGCCGGGTGTTTA  146
      ||   ||||||| || ||||||||||||| ||||||||||||||||||||
seq2  TCCACCAAGCTCCTTTAATAGGTTGCACT-GGAGAAGAGCCGGGTGTTTA  148

seq1  CTGCAGCATGCTTTGGG-AATTTATT-CCATAGAAAATGTTACAGAGGA-  193
      ||||||||||||||||| |||||||| |||||||||||||||||||||| 
seq2  CTGCAGCATGCTTTGGGAAATTTATTCCCATAGAAAATGTTACAGAGGAC  198

seq1  CATTTTTA-TCTGCTTGTTTTTGCATTTATAAGGTAAACTG-TACGTTTC  241
      |||||||| |||||||||||||||||||||||||||||||| ||||||||
seq2  CATTTTTATTCTGCTTGTTTTTGCATTTATAAGGTAAACTGTTACGTTTC  248

seq1  TTTATATTCTC-AGGCTTCAGCTATTTTTGCTCTCATCTCTGCCCAGAAG  290
      ||||||||||| || ||||||||| |||||||||||||||||||||||||
seq2  TTTATATTCTCAAGCCTTCAGCTA-TTTTGCTCTCATCTCTGCCCAGAAG  297

seq1  TAGAAGCCCCAGGGTGGACAGAAACGCTCTTCAGGTCTCAAGCTATAAAT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCCCCAGGGTGGACAGAAACGCTCTTCAGGTCTCAAGCTATAAAT  347

seq1  ATTTAACTGTTCATGAGCTAACACTTGGTCTACGTACTCTTAAAGGTACA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACTGTTCATGAGCTAACACTTGGTCTACGTACTCTTAAAGGTACA  397

seq1  AGTCATATTGGCTTATCAGTCAGTCAATTATTCTGGGAGCTTCCAGAGCT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATATTGGCTTATCAGTCAGTCAATTATTCTGGGAGCTTCCAGAGCT  447

seq1  CACGGGTCGGCACATAGCTGGCACAGACAATGTCTATTGAATGGATAACA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGGTCGGCACATAGCTGGCACAGACAATGTCTATTGAATGGATAACA  497

seq1  TATTTGAGTAAGTAAGAAAATTTTCGGACTGCAACTACAGTGCCTTCTAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAGTAAGTAAGAAAATTTTCGGACTGCAACTACAGTGCCTTCTAT  547

seq1  TTAACTCCTAAGTACTCGCAAGCAACTTTCTAGACAGCAGGAGCAAGCTG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCCTAAGTACTCGCAAGCAACTTTCTAGACAGCAGGAGCAAGCTG  597

seq1  TTTGTGATAGAAATTTACTACCAGTCACTTCACCAGTAATAGAAGCTTTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGATAGAAATTTACTACCAGTCACTTCACCAGTAATAGAAGCTTTA  647

seq1  TCAATGCAATAAGCCTATATCCAGTTGTCATACATTGTGTGCAAGGCAAC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCAATAAGCCTATATCCAGTTGTCATACATTGTGTGCAAGGCAAC  697

seq1  TGGATATGAACCAAATAGTTTCCTTCCACATAGAAATTTTACCAACAGTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATGAACCAAATAGTTTCCTTCCACATAGAAATTTTACCAACAGTG  747

seq1  TGGTGAGTACGTCGGCAAGCACATAATGAATTAAACTTCTCTCCGGCCAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGTACGTCGGCAAGCACATAATGAATTAAACTTCTCTCCGGCCAA  797

seq1  CATGCTTACACCCCAGGGTAATACTGAGCATTAGAGGTGTTTCTAGGTAC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTACACCCCAGGGTAATACTGAGCATTAGAGGTGTTTCTAGGTAC  847

seq1  TACTGGGAAGGAGAACATTAAAATCCCCTCCTCCCCAGGAGATGGCAGCG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGAAGGAGAACATTAAAATCCCCTCCTCCCCAGGAGATGGCAGCG  897

seq1  CGGTTTCCTACTGAATAATTGCAGCCATTACTTTTAGTTCATCTCCTTTG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTCCTACTGAATAATTGCAGCCATTACTTTTAGTTCATCTCCTTTG  947

seq1  TATAATTTCATTTGTTAAAGGGGTAATTTATTCTGTCCACTTTCCTTTAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTTCATTTGTTAAAGGGGTAATTTATTCTGTCCACTTTCCTTTAA  997

seq1  ATTTCATCTCTGTGTGTGTGCCTTTCATTTTAGAATTTCAAAGCTAGCCT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATCTCTGTGTGTGTGCCTTTCATTTTAGAATTTCAAAGCTAGCCT  1047

seq1  TAACTATTTTTGTTGTTGTTCATCTTTTTTCAGAGTTGAACTTAAGAGGA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATTTTTGTTGTTGTTCATCTTTTTTCAGAGTTGAACTTAAGAGGA  1097

seq1  ACCACAGGAAGGTGTGCCGTTAGCCTTGACATTTGATAGCAGGGAAGTGC  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGGAAGGTGTGCCGTTAGCCTTGACATTTGATAGCAGGGAAGTGC  1147

seq1  AAACTGTTTGCAGAATTC  1158
      ||||||||||||||||||
seq2  AAACTGTTTGCAGAATTC  1165