BAC Information

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BAC

Clone NameB6Ng01-244D10
Chromosome2 (Build37)
Map Location 139,894,746 - 139,895,129
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628103, C130053K05Rik, LOC100043792, 5430433G21Rik, Tasp1, LOC672103
Downstream geneLOC269365, Esf1, 2310003L22Rik, Sel1l2, 2900006F19Rik, Flrt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244D10.bB6Ng01-244D10.g
ACCGA053404GA053405
length1,0461,160
definitionB6Ng01-244D10.b B6Ng01-244D10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaaattccatctaatgactgacttgggtctctgcatctctttt
gttcagctactggataaagactctaagaggacagttatgttacacttctg
tctgcaagcattatagaataaaattaatagtgttagaaataggttcttgc
ccatgggctgggtttcaagttgggccagttattggtaggtcattccttta
gtctatgcttgcacttcttatcaggaggacaactttggatcaaaggtgtt
agtaaattctaacttctctcatcaaattcatgtttaataaaaatttttgt
gtcatgtaagttttttaaggcttttcaaatatggcatttcctaaaactag
aatattgtccagatcaactgaccactttataaatatttagttcatggtta
atttattattgtttaattaaaatataattttatcaatttccctcatttat
ctcattctgtcaactccatataacctcaccatgctccctttcaaaatcat
ggcatattttaatttttctgctatagttacacgcccacacatacctgaat
cctaaatacaaattgctcaatctgtgtagcttatatctatatgataaaat
tttaccacatatttgtggatagaaaactggggaagttcccttggggaggg
ttatttctcccactctttcactctccaaatttcttatatgcctgtacttt
tcttttcttttcttttcttttcttttcttttttttttctttttttttttt
tggctagggctgaagtttcacaaaatattctcctttggttttaacatgtc
tactagtgttgacattctctgcatcttgcttaagcagctaggttaatgaa
gtgttatgggtgtagttttgttgacatttctgggagacctggtaccatac
tagactacttggttccacaagctctaaaatcttactgcctccttattctt
tctgttgcctacaccctacactttggggcagattttgttgtttactaacc
tttgcagctaggttccaagaccactttttttttttttcctttgggc
gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcac
cggtcccgagtttttttctcgtcccggaattcggcaccaattgttattag
acgcgttctcacgaccggccaggaagaacaccacagaccagaatcttctg
cggcaaagctttattgcttacatcttcaggagccagagtgcaagaagcaa
gagagcaagaagcaagagagagagaaaacgaaaccccgtccctattaagg
agaattctccttcgcctaggacgtgtcactccctgattggctgcagccca
tcggccgagttgacgtcacggggaaggcagagcacatggagtggagaacc
accctcggcatatgcgcagtttatttgtttaccacttagaacacagctgt
cagcgccatcttgtaacggcgaatgtgggcgcggctcccaacaataggaa
gaaacaattaatttcccttaatatctcttaatattaatggactcaactcc
ctaataaaaagacatagactaacagactggctacacaaagaggacccaac
tgttttctgcttacaggaaacccatctcagggaaaaagacagacactagc
tcagaatgaaaggctggaaaacaattttccaagcaaatggtctgaagaaa
caagctggagtagccattctaatatctaataaaatcgacttccattccaa
agtcatcaaaaaagacaaggaggggcacttcatactcatcaaaaataaaa
tattccaagaggaactctcaattctgaatatctatgctcaaaatacaagg
gcagccacattcattaaagaaactttagtaaagctcaaagcacacatttc
acctccacacaataatagtggggagacttcaacacatcactttccaccaa
tggacagatcatggaaacagaaaactaaacagggacacagtgaaactaac
agaagtatgaaacagtgatctacagatatctacggacattttatcaaaaa
caaaaggatatacttcttcctcagcacttcatgtactctcaaacttcacc
acatatgtccaaacagctcaacaagtaaatatatcatgaataatgtaaca
tcgataccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_139894746_139895129
seq2: B6Ng01-244D10.b_761_1094 (reverse)

seq1  GCCCAGAAGGAAAAAAAAAAAAAAAAAATTCTTAATGGTTTAGTTAGTGA  50
      ||||| ||||||||||||||||           | |||| |      || 
seq2  GCCCA-AAGGAAAAAAAAAAAA-----------AGTGGTCT------TGG  32

seq1  ATGGTAGCCATAAAG--TAGAAGTTAACA------GC----AAG----GA  84
      |   ||||   ||||  ||| |   ||||      ||    |||    | 
seq2  AACCTAGCTGCAAAGGTTAGTAAACAACAAAATCTGCCCCAAAGTGTAGG  82

seq1  TTCTA-GAAACAG-AAGAAT-------CAGT--GTTTATATATCTGTGTT  123
       | || | ||||| ||||||       ||||  | || || | || ||| 
seq2  GTGTAGGCAACAGAAAGAATAAGGAGGCAGTAAGATTTTAGAGCT-TGTG  131

seq1  CTACCACTTAACTAAAACATTGAACGATTTGCTTTATCTTCCTACTATTT  173
        ||||  | | |  |  || | || |         ||| ||        
seq2  GAACCAAGT-AGTCTAGTATGGTACCA-------GGTCTCCC-----AGA  168

seq1  AATTTCCACATTTGTAAAATGAGGATTAAAAATTGTTGTGTGTGCCAGGC  223
      ||| || |||    || |   |    ||| | ||  |   |   | ||  
seq2  AATGTCAACAAAACTACACCCA----TAACACTTCAT---TAACCTAG--  209

seq1  GGTGGTGGCGCATGCCTTTAATCCCAGCACATGGGAGGCAGAGACAGGCG  273
                  |||  |||     ||||     || |||||||  | | 
seq2  -----------CTGC--TTA-----AGCA----AGATGCAGAGAATGTC-  236

seq1  GATTTCTGAGTTCAAGACCAGCCTACTCTACAAAGTGAG-----TTCCAG  318
       |   || |||   ||||  |   |  |  ||||| |||     ||   |
seq2  -AACACT-AGT---AGACATGTTAAAAC--CAAAG-GAGAATATTTTGTG  278

seq1  GACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACCAAAAAAAAA  368
       |    |||  |||  || | |||          |||||  |||||||||
seq2  AAACTTCAGCCCTAGCCAAAAAAA----------AAAAAAGAAAAAAAAA  318

seq1  AGAAAAGAAAAGAAAA  384
      ||||||||||||||||
seq2  AGAAAAGAAAAGAAAA  334