BAC Information

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BAC

Clone NameB6Ng01-244D18
Chromosome2 (Build37)
Map Location 11,782,555 - 11,884,617
singlet/doubletdoublet
Overlap geneEG635919
Upstream geneLOC100040690, LOC100040703, LOC667192, Prkcq, LOC100040733, LOC100040898, LOC667211, Pfkfb3, Rbm17, Il2ra, Il15ra, Fbxo18, Ankrd16
Downstream geneLOC667247, Itga8, 2310047O13Rik, LOC100040837, Pter
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244D18.bB6Ng01-244D18.g
ACCGA053420GA053421
length97979
definitionB6Ng01-244D18.b B6Ng01-244D18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,782,555 - 11,783,141)(11,884,539 - 11,884,617)
sequence
gaattcattttaaaatcagaaataattttatccaattaagttaaaagtca
tttgaaaagaatatttgcttttttaagacagacatctccccttccactcc
actcgagcactggggtaccttgccagcggagtcgcccgacacccgcaagg
gcccacacaggattccccatgggatcctaagacctctggtgagtggaaca
cagcgtctgccccaatccaatcgcgcggaacctgagaatgctgtaaatag
ggaagcagactacccgtgcctgacctggggcacaagtcccttccactcca
cttgagcactggggtgccttgccagcagagtcgcctgacacccgcaaggg
cccacactggattccccacgggatccgaagacctctagtgagtggaacac
aacttctgccaggagtctgattcgaacaccagatatctgggtaccttccc
tgcaagaagagagcttgcctgaagagaatactctgcccactgaaactaag
gagagagctagcctcccaggtctgcttatagaggctaccagagtcacctg
aagaacaagttcttaccagagacaactataacagctagcttcagagatta
ccagatggcgaaaggcaaacgtaagaatcctactaacagaaatcaagacc
actcaccatcatcagaacgcagcactcccaccccacctagtcctgggcac
cccaacacaaccgaaaatctagacccagatttaaaaacatttctcatgat
gatgatagaggacatcaagaaggactttcataagtcacttaaagaattac
aggagagcactgctaaagagttacaggcccttaaaagcaggaaaacacaa
ccaaacaggtagaagtccttaaagaaaaacaggaaaacacatccaaacag
gtgatgggaaatgaacaaaaccatactagaactaaaaagggaagtagaca
caataaagaaaaccccaaagtgaggcaac
aagagcaaccgtgagctggccctgtaatttcagctgtagcgattggatgt
tccctcccactcctggtctgtctctgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_11782555_11783141
seq2: B6Ng01-244D18.b_44_630

seq1  GAATTCATTTTAAAATCAGAAATAATTTTATCCAATTAAGTTAAAAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTAAAATCAGAAATAATTTTATCCAATTAAGTTAAAAGTCA  50

seq1  TTTGAAAAGAATATTTGCTTTTTTAAGACAGACATCTCCCCTTCCACTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAAGAATATTTGCTTTTTTAAGACAGACATCTCCCCTTCCACTCC  100

seq1  ACTCGAGCACTGGGGTACCTTGCCAGCGGAGTCGCCCGACACCCGCAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGAGCACTGGGGTACCTTGCCAGCGGAGTCGCCCGACACCCGCAAGG  150

seq1  GCCCACACAGGATTCCCCATGGGATCCTAAGACCTCTGGTGAGTGGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACACAGGATTCCCCATGGGATCCTAAGACCTCTGGTGAGTGGAACA  200

seq1  CAGCGTCTGCCCCAATCCAATCGCGCGGAACCTGAGAATGCTGTAAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTCTGCCCCAATCCAATCGCGCGGAACCTGAGAATGCTGTAAATAG  250

seq1  GGAAGCAGACTACCCGTGCCTGACCTGGGGCACAAGTCCCTTCCACTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCAGACTACCCGTGCCTGACCTGGGGCACAAGTCCCTTCCACTCCA  300

seq1  CTTGAGCACTGGGGTGCCTTGCCAGCAGAGTCGCCTGACACCCGCAAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGCACTGGGGTGCCTTGCCAGCAGAGTCGCCTGACACCCGCAAGGG  350

seq1  CCCACACTGGATTCCCCACGGGATCCGAAGACCTCTAGTGAGTGGAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACTGGATTCCCCACGGGATCCGAAGACCTCTAGTGAGTGGAACAC  400

seq1  AACTTCTGCCAGGAGTCTGATTCGAACACCAGATATCTGGGTACCTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTGCCAGGAGTCTGATTCGAACACCAGATATCTGGGTACCTTCCC  450

seq1  TGCAAGAAGAGAGCTTGCCTGAAGAGAATACTCTGCCCACTGAAACTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGAAGAGAGCTTGCCTGAAGAGAATACTCTGCCCACTGAAACTAAG  500

seq1  GAGAGAGCTAGCCTCCCAGGTCTGCTTATAGAGGCTACCAGAGTCACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGCTAGCCTCCCAGGTCTGCTTATAGAGGCTACCAGAGTCACCTG  550

seq1  AAGAACAAGTTCTTACCAGAGACAACTATAACAGCTA  587
      |||||||||||||||||||||||||||||||||||||
seq2  AAGAACAAGTTCTTACCAGAGACAACTATAACAGCTA  587

seq1: chr2_11884539_11884617
seq2: B6Ng01-244D18.g_72_150 (reverse)

seq1  ACACAGAGACAGACCAGGAGTGGGAGGGAACATCCAATCGCTACAGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGACAGACCAGGAGTGGGAGGGAACATCCAATCGCTACAGCTGA  50

seq1  AATTACAGGGCCAGCTCACGGTTGCTCTT  79
      |||||||||||||||||||||||||||||
seq2  AATTACAGGGCCAGCTCACGGTTGCTCTT  79