BAC Information

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BAC

Clone NameB6Ng01-244H07
Chromosome2 (Build37)
Map Location 73,187,782 - 73,316,179
singlet/doubletdoublet
Overlap geneGpr155, Wipf1
Upstream geneB230120H23Rik, Cdca7, LOC383712, LOC635960, LOC100039928, 6430710C18Rik, Sp3, Hspe1-ps5, Gtpbp9, LOC620110, Sp9, 1700023B02Rik, Scrn3
Downstream geneChrna1, Chn1, Atf2, Atp5g3, LOC667729, LOC100040172
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244H07.bB6Ng01-244H07.g
ACCGA053587GA053588
length1,1441,084
definitionB6Ng01-244H07.b B6Ng01-244H07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,315,039 - 73,316,179)(73,187,782 - 73,188,864)
sequence
gaattcctcagggaggaagtgacttgactgaattccacaggtctgtgtgt
gtgttcagagctccccgcatccacttcccagaagcatgaagtaaaacaaa
ctggagcattttagcagttcaaaaagcattttgtaattctacacgagcag
ccagcagcactgcagaatggttttcacagtaaacctaacataatggaacc
cacccgtttcaagtagttgctcttaggtgggacaatccacagatccatga
ataacatgtttcctcggcctctgccccatacagtgatgggcaccttgaga
gcaatgttacctgtgagttaaaatcatgctgatcaggcagacccacagaa
cacctgaatgcaaaagccgttagccagcagcagtgtcccagtctgtatgc
ccagatataactggactcggggatactgtcaggcagacgccccagggaga
tctgagtgaaatgttctgcaggccttagaagtaatccaggacccagaggt
tgtggccgcagcacaggcactgggaagaaaactgggtcctgtcctctcca
cgcaggccagagtgctgcagggatggaggtcagctccaataagcaacatc
ctcccaaggggacgttcccaagcagtactctccatagttggtatttgttc
ttgtttgccccgacgcagaaatgctggttatcaaacaatcgggatgcttc
aaaaaccagttagtgaattgttcgcagcttctgttgcctcagcgaacaac
agagtccccaagacttctgtaattccacagctgaaaagacagtgccaggc
actgctctgggaccgagttctagcacttgacagagtccagttttgaaacg
tgttatatgtggcctctgtacccctgagaaaatgagaacaaagcattcct
gtgagcaagtgacagagatttccagaggtctgggatggcagaatttgaaa
cctgcaagcgtgtgtggggagttgactggttctgtggctcaggcctcctc
cacagtagctcaaggctattccatacttgctggcagccgtggctacaggg
ggtcgtgactatgaaagaaaccgaggtaagttgccactctccctccaggg
aggattagtcccctgtttcagttgaccccagctttaaaagagaa
gaattcaacagtaaaaccttaagacagaaactaagatgcttagtgagcga
ggaggcagccgacagtgatcagagcagcctctgaaattcagcatccaggg
tagacacgggctcagtgcctgtgggcatccacaacaccctgcttgctctc
tcttcccaatcactctgccctaggaattaggatggtgagggaagccagtg
ctgacgctgcacctgcaggacagctcactggaggaaactggactctctta
aagcctatatgctcctgtttccccctttatgaaaagaaaatccctctccc
tgtgcctaagtacttattttttctcttgaaacttcatcaatataatcagc
aagggctgtaatatctaattgtaatacatttagtgttgtgtggtagatat
aaaaggtttcgcccaaagacttatgccttgcaagtgtggttctttgcaca
ctgttacatgagactagcgggcaggcccagcagttaggagggcccaccac
tcttcaggtcccagcccccacactgagtagttcaaaactgcttgtagctc
cagttccaggggatttggcacctctttctggcctctacaggcaacacttc
tcaaatacataccctaccttatacacattggacttgattgtctttgcccg
taaactacaaactgtcagaagggaatacctcactacaccaagtccgtaca
agaaaaacggactggagagggagctgtgccttctcacgcctttcaaaagg
cataagctgtgtaagcggcgtctgaagggcagcattccggccctatgttc
tgttcttgcgcagccctatgcactgagctcgctttaactcctatcctagc
ttggctcagcccgctgtgggctttctaaatgcgaaatgctaaaggggctt
ggggtggggggtactgtgaattttcagcctagcattctacaggttggtaa
agtcaggatctgaaatagtatcacacagtgagactggtatcagtgactct
gggggtgccatgtttgtctgtaataactgattacgaatgtttcctttata
ctttgtattttcttcggaataacaatgtcaaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_73315039_73316179
seq2: B6Ng01-244H07.b_45_1188 (reverse)

seq1  TTCTCTTTTAAAAGCTGGGG-CCACTGAAAACAGGGACCTAAATCCTCCC  49
      ||||||||| |||||||||| | |||| ||||||||  || |||||||||
seq2  TTCTCTTTT-AAAGCTGGGGTCAACTG-AAACAGGGGACT-AATCCTCCC  47

seq1  TGGA-GGAGAGTGGCACTTTACCTCGGTTTCTTTCATAGTCACGA-CCCC  97
      |||| |||||||||||  ||||||||||||||||||||||||||| ||||
seq2  TGGAGGGAGAGTGGCAACTTACCTCGGTTTCTTTCATAGTCACGACCCCC  97

seq1  TGTAGCCAC-GCTGCCAGCAAGTATGGAATAGCC-TGAGCTACTGTGGAG  145
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  TGTAGCCACGGCTGCCAGCAAGTATGGAATAGCCTTGAGCTACTGTGGAG  147

seq1  GAGG-CTGAGCCACAGAACCAGTCAACTCCCCACACACGCTTGCAGGTTT  194
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTGAGCCACAGAACCAGTCAACTCCCCACACACGCTTGCAGGTTT  197

seq1  C-AATTCTGCCATCCCAGACCTCTGGAAATCTCTTGTCACTTGCTCACAG  243
      | ||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAAATTCTGCCATCCCAGACCTCTGGAAATCTC-TGTCACTTGCTCACAG  246

seq1  GAATGCTTTGTTCTCATTTTCTCAGGGGTACAGAGGCCACATATAACACG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTTTGTTCTCATTTTCTCAGGGGTACAGAGGCCACATATAACACG  296

seq1  TTTCAAAACTGGACTCTGTCAAGTGCTAGAACTCGGTCCCAGAGCAGTGC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAACTGGACTCTGTCAAGTGCTAGAACTCGGTCCCAGAGCAGTGC  346

seq1  CTGGCACTGTCTTTTCAGCTGTGGAATTACAGAAGTCTTGGGGACTCTGT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACTGTCTTTTCAGCTGTGGAATTACAGAAGTCTTGGGGACTCTGT  396

seq1  TGTTCGCTGAGGCAACAGAAGCTGCGAACAATTCACTAACTGGTTTTTGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCGCTGAGGCAACAGAAGCTGCGAACAATTCACTAACTGGTTTTTGA  446

seq1  AGCATCCCGATTGTTTGATAACCAGCATTTCTGCGTCGGGGCAAACAAGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCCGATTGTTTGATAACCAGCATTTCTGCGTCGGGGCAAACAAGA  496

seq1  ACAAATACCAACTATGGAGAGTACTGCTTGGGAACGTCCCCTTGGGAGGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATACCAACTATGGAGAGTACTGCTTGGGAACGTCCCCTTGGGAGGA  546

seq1  TGTTGCTTATTGGAGCTGACCTCCATCCCTGCAGCACTCTGGCCTGCGTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTTATTGGAGCTGACCTCCATCCCTGCAGCACTCTGGCCTGCGTG  596

seq1  GAGAGGACAGGACCCAGTTTTCTTCCCAGTGCCTGTGCTGCGGCCACAAC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGACAGGACCCAGTTTTCTTCCCAGTGCCTGTGCTGCGGCCACAAC  646

seq1  CTCTGGGTCCTGGATTACTTCTAAGGCCTGCAGAACATTTCACTCAGATC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGTCCTGGATTACTTCTAAGGCCTGCAGAACATTTCACTCAGATC  696

seq1  TCCCTGGGGCGTCTGCCTGACAGTATCCCCGAGTCCAGTTATATCTGGGC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGGGCGTCTGCCTGACAGTATCCCCGAGTCCAGTTATATCTGGGC  746

seq1  ATACAGACTGGGACACTGCTGCTGGCTAACGGCTTTTGCATTCAGGTGTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGACTGGGACACTGCTGCTGGCTAACGGCTTTTGCATTCAGGTGTT  796

seq1  CTGTGGGTCTGCCTGATCAGCATGATTTTAACTCACAGGTAACATTGCTC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGTCTGCCTGATCAGCATGATTTTAACTCACAGGTAACATTGCTC  846

seq1  TCAAGGTGCCCATCACTGTATGGGGCAGAGGCCGAGGAAACATGTTATTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTGCCCATCACTGTATGGGGCAGAGGCCGAGGAAACATGTTATTC  896

seq1  ATGGATCTGTGGATTGTCCCACCTAAGAGCAACTACTTGAAACGGGTGGG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCTGTGGATTGTCCCACCTAAGAGCAACTACTTGAAACGGGTGGG  946

seq1  TTCCATTATGTTAGGTTTACTGTGAAAACCATTCTGCAGTGCTGCTGGCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTATGTTAGGTTTACTGTGAAAACCATTCTGCAGTGCTGCTGGCT  996

seq1  GCTCGTGTAGAATTACAAAATGCTTTTTGAACTGCTAAAATGCTCCAGTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTGTAGAATTACAAAATGCTTTTTGAACTGCTAAAATGCTCCAGTT  1046

seq1  TGTTTTACTTCATGCTTCTGGGAAGTGGATGCGGGGAGCTCTGAACACAC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTACTTCATGCTTCTGGGAAGTGGATGCGGGGAGCTCTGAACACAC  1096

seq1  ACACAGACCTGTGGAATTCAGTCAAGTCACTTCCTCCCTGAGGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACCTGTGGAATTCAGTCAAGTCACTTCCTCCCTGAGGAATTC  1144

seq1: chr2_73187782_73188864
seq2: B6Ng01-244H07.g_62_1145

seq1  GAATTCAACAGTAAAACCTTAAGACAGAAACTAAGATGCTTAGTGAGCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGTAAAACCTTAAGACAGAAACTAAGATGCTTAGTGAGCGA  50

seq1  GGAGGCAGCCGACAGTGATCAGAGCAGCCTCTGAAATTCAGCATCCAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGCCGACAGTGATCAGAGCAGCCTCTGAAATTCAGCATCCAGGG  100

seq1  TAGACACGGGCTCAGTGCCTGTGGGCATCCACAACACCCTGCTTGCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACGGGCTCAGTGCCTGTGGGCATCCACAACACCCTGCTTGCTCTC  150

seq1  TCTTCCCAATCACTCTGCCCTAGGAATTAGGATGGTGAGGGAAGCCAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCAATCACTCTGCCCTAGGAATTAGGATGGTGAGGGAAGCCAGTG  200

seq1  CTGACGCTGCACCTGCAGGACAGCTCACTGGAGGAAACTGGACTCTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACGCTGCACCTGCAGGACAGCTCACTGGAGGAAACTGGACTCTCTTA  250

seq1  AAGCCTATATGCTCCTGTTTCCCCCTTTATGAAAAGAAAATCCCTCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTATATGCTCCTGTTTCCCCCTTTATGAAAAGAAAATCCCTCTCCC  300

seq1  TGTGCCTAAGTACTTATTTTTTCTCTTGAAACTTCATCAATATAATCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTAAGTACTTATTTTTTCTCTTGAAACTTCATCAATATAATCAGC  350

seq1  AAGGGCTGTAATATCTAATTGTAATACATTTAGTGTTGTGTGGTAGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTGTAATATCTAATTGTAATACATTTAGTGTTGTGTGGTAGATAT  400

seq1  AAAAGGTTTCGCCCAAAGACTTATGCCTTGCAAGTGTGGTTCTTTGCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTTTCGCCCAAAGACTTATGCCTTGCAAGTGTGGTTCTTTGCACA  450

seq1  CTGTTACATGAGACTAGCGGGCAGGCCCAGCAGTTAGGAGGGCCCACCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACATGAGACTAGCGGGCAGGCCCAGCAGTTAGGAGGGCCCACCAC  500

seq1  TCTTCAGGTCCCAGCCCCCACACTGAGTAGTTCAAAACTGCTTGTAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGGTCCCAGCCCCCACACTGAGTAGTTCAAAACTGCTTGTAGCTC  550

seq1  CAGTTCCAGGGGATTTGGCACCTCTTTCTGGCCTCTACAGGCAACACTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCAGGGGATTTGGCACCTCTTTCTGGCCTCTACAGGCAACACTTC  600

seq1  TCAAATACATACCCTACCTTATACACATTGGACTTGATTGTCTTTGCCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATACATACCCTACCTTATACACATTGGACTTGATTGTCTTTGCCCG  650

seq1  TAAACTACAAACTGTCAGAAGGGAATACCTCACTACACCAAGTCCGTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTACAAACTGTCAGAAGGGAATACCTCACTACACCAAGTCCGTACA  700

seq1  AGAAAAACGGACTGGAGAGGGAGCTGTGCCTTCTCACGCCTTTCAAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACGGACTGGAGAGGGAGCTGTGCCTTCTCACGCCTTTCAAAAGG  750

seq1  CATAAGCTGTGTAAGCGGCGTCTGAAGGGCAGCATTCCGGCCCTATGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCTGTGTAAGCGGCGTCTGAAGGGCAGCATTCCGGCCCTATGTTC  800

seq1  TGTTCTTGCGCAGCCCTATGCACTGAGCTCGC-TTAACTCCTATCCTAGC  849
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTTCTTGCGCAGCCCTATGCACTGAGCTCGCTTTAACTCCTATCCTAGC  850

seq1  TTGGCTCAGCCCGCTGTGGGCTTTCTAAATGCGAAATGCTAAGGGGGCTT  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTGGCTCAGCCCGCTGTGGGCTTTCTAAATGCGAAATGCTAAAGGGGCTT  900

seq1  GGGGT-GGGGGTACTGTGAATTTTCAGCCTAGCATTCTACA-GTTGGTAA  947
      ||||| ||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGGGTGGGGGGTACTGTGAATTTTCAGCCTAGCATTCTACAGGTTGGTAA  950

seq1  AGTCA-GATCTGAAATAGTATCACACAGTGAGACTGGTATCAGGTGACTC  996
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  AGTCAGGATCTGAAATAGTATCACACAGTGAGACTGGTATCA-GTGACTC  999

seq1  TGGGGTGCCCATGTTTGTCTGTAATAAACTGATTACAGAATGTTT-CTTT  1045
      |||||   ||||||||||||||||| |||||||||| |||||||| ||||
seq2  TGGGGGTGCCATGTTTGTCTGTAAT-AACTGATTAC-GAATGTTTCCTTT  1047

seq1  ATACTTTGTTAATTTTCTTCCG-ATAACAATGTCAAAAC  1083
      |||||||||  ||||||||| | ||||||||||||||||
seq2  ATACTTTGT--ATTTTCTTCGGAATAACAATGTCAAAAC  1084