BAC Information

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BAC

Clone NameB6Ng01-244N17
Chromosome2 (Build37)
Map Location 48,830,134 - 48,831,166
singlet/doubletsinglet
Overlap geneLOC100041508
Upstream geneLOC383691, LOC100041457, LOC383692, Acvr2a, Orc4l
Downstream geneMbd5, LOC100042719, LOC666709, LOC435666, Epc2, Kif5c, 2310010M24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244N17.bB6Ng01-244N17.g
ACCGA053890GA053891
length1,028612
definitionB6Ng01-244N17.b B6Ng01-244N17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttcaaaaaaattcatgttctaagctacattataaacgatagc
aaaggtataataaacaatggataaataattgcactaaaaaagcatattta
gaaattaagttggaattcatctattgcactttgctggagccatttgtgtg
aggtcttcatttactgagctggccttgctgtttctgtatctgtgtttctg
tacacatagatcctttaggctagggagccccaatcaatcttatttgtcca
gaaattccaactcatagctgaaattcttttcacttcttatgtgaatcctt
tttgacaaaggagaacttctcagcatgagatgttagcattcttcacaagt
acttcaattagagatgacatcagatttgtttctttatgtctgacttagtc
actctataacttccttaaaaggcagagctccattcttgggtgctgaggga
acattacccatgtacataaaaaggcatttagtaaaagtactaccttacat
ttttagttcctactttgacttcctggtaggcttcagatctaacagtatac
aagcacgatattaaaaacatccacacttgctactgcccatattccttcct
cttaaaatctccctctacctccacataaattgtattccattccctttgct
gcagaatccttactttcatctagaattgtctgagtccttgcaacgcttag
tgaccaggacaatgtaagaacatgtgatgatgcaggctaaatgtgacggc
aaaaataaaaacaaaaaccttcacagtcgtaggggtgcaaaagcaatacc
agaagatcttcacaaaaattatttaatcataaataatgaagaaagggcaa
attaagtatgcctgtttaaactcagtgacttataagaagtgacaagtgat
gtagggattgtagtaaaattaagttggggtaggagaatggctaagcctgt
gggcgccagacaagaacacatgcatgtgcacagcagaactgaggacctag
catgtgaagagagacagttattgtgagt

gaattccgaagagtaaagttttactgatttggcttccatgacctataagc
gtttaccagagaaaggaagaccacacaaccttcactaggtaacacccaac
atggttcgttacaagtttgaatacttacaagaagagaatctaaacgtcta
ctacatttaattagtgtgtgtgtctgtgtgtgctgtgtgtgtgtgtgtgt
acatgcatgtgtgcatgcatgcatgtgtgagtgcttgcatgtgagtgcac
acacacacgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcacatgcgt
gcgtgcgcacatgcgtgtgcacacacacacacacagagcacacagacaca
cacacacattaaatgtggtagacgtgtagattctcttcttgtgagtgtac
aaacacgtaacgcaccatgtggggtgtgacacagagaaaagtgtgtgttc
ttcctttctctggtaaacgcgcatatgtcatgtgagcgacatctgagaac
tctactctccgcagtactgcgcatctctctatagtgtgacatatatgtct
agacccaggcgcgcgcgcgggtctcactagtctatttcgaggatatagac
agcacatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_48830134_48831166
seq2: B6Ng01-244N17.b_46_1073 (reverse)

seq1  ACTCAC-ATAACTGTTCTCTCTTCAACATGCTAGGTTCTTCAGTTCTTGC  49
      |||||| ||||||| ||||||||| |||||||||| || ||||||||   
seq2  ACTCACAATAACTG-TCTCTCTTC-ACATGCTAGG-TCCTCAGTTCT--G  45

seq1  CTGTGCACATGCATTGTGTTC-TGTCTGGCGCCCACAGGCTTAGCCATTC  98
      ||||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  CTGTGCACATGCA-TGTGTTCTTGTCTGGCGCCCACAGGCTTAGCCATTC  94

seq1  TCCTACCCCAACTTAATTTTACTACAATCCCTACATCACTTGTCACTTCT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACCCCAACTTAATTTTACTACAATCCCTACATCACTTGTCACTTCT  144

seq1  TATAAGTCACCTGAGTTTAAACAGGCATACTTAATTTGCCCTTTCTTCAT  198
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTCA-CTGAGTTTAAACAGGCATACTTAATTTGCCCTTTCTTCAT  193

seq1  TATTTATGATTAATTAATTTTTGTGAAGATCTTCTGGTATTGCTTTTGCA  248
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TATTTATGATTAAATAATTTTTGTGAAGATCTTCTGGTATTGCTTTTGCA  243

seq1  CCCCTACGACTGTGAAGGTTTTTGTTTTTATTTTTGCCGTCACATTTAGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACGACTGTGAAGGTTTTTGTTTTTATTTTTGCCGTCACATTTAGC  293

seq1  CTGCATCATCACATGTTCTTACATTGTCCTGGTCACTAAGCGTTGCAAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCATCACATGTTCTTACATTGTCCTGGTCACTAAGCGTTGCAAGG  343

seq1  ACTCAGACAATTCTAGATGAAAGTAAGGATTCTGCAGCAAAGGGAATGGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGACAATTCTAGATGAAAGTAAGGATTCTGCAGCAAAGGGAATGGA  393

seq1  ATACAATTTATGTGGAGGTAGAGGGAGATTTTAAGAGGAAGGAATATGGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATTTATGTGGAGGTAGAGGGAGATTTTAAGAGGAAGGAATATGGG  443

seq1  CAGTAGCAAGTGTGGATGTTTTTAATATCGTGCTTGTATACTGTTAGATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGCAAGTGTGGATGTTTTTAATATCGTGCTTGTATACTGTTAGATC  493

seq1  TGAAGCCTACCAGGAAGTCAAAGTAGGAACTAAAAATGTAAGGTAGTACT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCTACCAGGAAGTCAAAGTAGGAACTAAAAATGTAAGGTAGTACT  543

seq1  TTTACTAAATGCCTTTTTATGTACATGGGTAATGTTCCCTCAGCACCCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAAATGCCTTTTTATGTACATGGGTAATGTTCCCTCAGCACCCAA  593

seq1  GAATGGAGCTCTGCCTTTTAAGGAAGTTATAGAGTGACTAAGTCAGACAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGAGCTCTGCCTTTTAAGGAAGTTATAGAGTGACTAAGTCAGACAT  643

seq1  AAAGAAACAAATCTGATGTCATCTCTAATTGAAGTACTTGTGAAGAATGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACAAATCTGATGTCATCTCTAATTGAAGTACTTGTGAAGAATGC  693

seq1  TAACATCTCATGCTGAGAAGTTCTCCTTTGTCAAAAAGGATTCACATAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCTCATGCTGAGAAGTTCTCCTTTGTCAAAAAGGATTCACATAAG  743

seq1  AAGTGAAAAGAATTTCAGCTATGAGTTGGAATTTCTGGACAAATAAGATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAAAGAATTTCAGCTATGAGTTGGAATTTCTGGACAAATAAGATT  793

seq1  GATTGGGGCTCCCTAGCCTAAAGGATCTATGTGTACAGAAACACAGATAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGGGCTCCCTAGCCTAAAGGATCTATGTGTACAGAAACACAGATAC  843

seq1  AGAAACAGCAAGGCCAGCTCAGTAAATGAAGACCTCACACAAATGGCTCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGCAAGGCCAGCTCAGTAAATGAAGACCTCACACAAATGGCTCC  893

seq1  AGCAAAGTGCAATAGATGAATTCCAACTTAATTTCTAAATATGCTTTTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGTGCAATAGATGAATTCCAACTTAATTTCTAAATATGCTTTTTT  943

seq1  AGTGCAATTATTTATCCATTGTTTATTATACCTTTGCTATCGTTTATAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAATTATTTATCCATTGTTTATTATACCTTTGCTATCGTTTATAAT  993

seq1  GTAGCTTAGAACATGAATTTTTTTGAACTGAATTC  1033
      |||||||||||||||||||||||||||||||||||
seq2  GTAGCTTAGAACATGAATTTTTTTGAACTGAATTC  1028


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