BAC Information

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BAC

Clone NameB6Ng01-245K24
Chromosome2 (Build37)
Map Location 111,566,047 - 111,672,036
singlet/doubletdoublet
Overlap geneOlfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825
Upstream geneMuc15, LOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1
Downstream geneOlfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245K24.bB6Ng01-245K24.g
ACCGA054509GA054510
length984415
definitionB6Ng01-245K24.b B6Ng01-245K24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,671,291 - 111,672,036)(111,566,047 - 111,566,467)
sequence
gaattcaataaagatgtagaaactttgaaaagaactcaagttgaaatgga
gatggaatgaaaaattccaatctttccaataacaattaggaaacaaagca
tacccctaaaattataatgaatctgctgtaattctcataggtctgccttt
atatgttacttggccttttcccctggttgattttaaacttcttcctttgt
tctgtatatttagcaggattttctttctttttttcacattagtttttaaa
attagatattttctttatttacatttcaaatgctatcatgaaagttccct
ataccctcccccccattctgctcctctacccacccactcccacttcttgg
ctctggctttccttcacctgtttgattgtattttcttctaattttttata
tttatttgtttcttcttttaatgcttctacttgtttgaacctatttcatt
tatttccttgagagattaattcatgtctccctaaaggcctctgcatcatc
tttataaaatgaaatttaagatcatcttgtgcttcagtttcattaggaaa
tccagagtttgttgtagcatgttagctgggctctggtggtaccatattgc
tctaggtcttgttgattttgttcttatgctgtcctttaggcatctgattt
tccctggtgatggctagataatcctgatgacagcaggacttcttggcatg
gtgggggacccctggaccagacaatgaagttcagagtacacatctctgct
agctgtgcctcagcagaccccacctttcagactgtgccctagaaggaccc
taatcttcatgctgtgtctcaatcaacctaactgggatgacaggcagatc
tgactttgcaagctgtatctcaggtggactaactgggaggtgggcaaata
caactaagatggaattgattaggcagctcagctatttagattttggacct
tctgaagtgtccatcgggagcagatatcattggg
tatgaggatttttggatcttgtaatttcaatatctttacttgggcatgat
tacaagtgtaattactttataaaaataatttgtcttgcagttgtgctggt
taatttttatgtcaatctgatacaagccagagtcattatgaagaaggaaa
cttcaattgagaaaatttctccagatagacaagcctgtggtatattttct
tgactgatgatttaggtggaaaggcccagattactatgggaagtagcttt
ctgggcagatgtttcagggtggttatgaagcagatttctgcctagtctta
ttataatttgtctggttgatatcccttaaagtcctgctcttttctaaaaa
aaaaaaaaaaaaaagcttgaggagcagtggatcttgggaagaaggaatgt
gggggtagggtaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111671291_111672036
seq2: B6Ng01-245K24.b_44_789 (reverse)

seq1  GAGATGTGTACTCTGAACTTCATTGTCTGGTCCAGGGGTCCCCCACCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTGTACTCTGAACTTCATTGTCTGGTCCAGGGGTCCCCCACCATG  50

seq1  CCAAGAAGTCCTGCTGTCATCAGGATTATCTAGCCATCACCAGGGAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAGTCCTGCTGTCATCAGGATTATCTAGCCATCACCAGGGAAAAT  100

seq1  CAGATGCCTAAAGGACAGCATAAGAACAAAATCAACAAGACCTAGAGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCCTAAAGGACAGCATAAGAACAAAATCAACAAGACCTAGAGCAA  150

seq1  TATGGTACCACCAGAGCCCAGCTAACATGCTACAACAAACTCTGGATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTACCACCAGAGCCCAGCTAACATGCTACAACAAACTCTGGATTTC  200

seq1  CTAATGAAACTGAAGCACAAGATGATCTTAAATTTCATTTTATAAAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAAACTGAAGCACAAGATGATCTTAAATTTCATTTTATAAAGATG  250

seq1  ATGCAGAGGCCTTTAGGGAGACATGAATTAATCTCTCAAGGAAATAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGGCCTTTAGGGAGACATGAATTAATCTCTCAAGGAAATAAATG  300

seq1  AAATAGGTTCAAACAAGTAGAAGCATTAAAAGAAGAAACAAATAAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGTTCAAACAAGTAGAAGCATTAAAAGAAGAAACAAATAAATATA  350

seq1  AAAAATTAGAAGAAAATACAATCAAACAGGTGAAGGAAAGCCAGAGCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAGAAGAAAATACAATCAAACAGGTGAAGGAAAGCCAGAGCCAA  400

seq1  GAAGTGGGAGTGGGTGGGTAGAGGAGCAGAATGGGGGGGAGGGTATAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGGAGTGGGTGGGTAGAGGAGCAGAATGGGGGGGAGGGTATAGGG  450

seq1  AACTTTCATGATAGCATTTGAAATGTAAATAAAGAAAATATCTAATTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCATGATAGCATTTGAAATGTAAATAAAGAAAATATCTAATTTTA  500

seq1  AAAACTAATGTGAAAAAAAGAAAGAAAATCCTGCTAAATATACAGAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAATGTGAAAAAAAGAAAGAAAATCCTGCTAAATATACAGAACAA  550

seq1  AGGAAGAAGTTTAAAATCAACCAGGGGAAAAGGCCAAGTAACATATAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAGTTTAAAATCAACCAGGGGAAAAGGCCAAGTAACATATAAAG  600

seq1  GCAGACCTATGAGAATTACAGCAGATTCATTATAATTTTAGGGGTATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACCTATGAGAATTACAGCAGATTCATTATAATTTTAGGGGTATGCT  650

seq1  TTGTTTCCTAATTGTTATTGGAAAGATTGGAATTTTTCATTCCATCTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCCTAATTGTTATTGGAAAGATTGGAATTTTTCATTCCATCTCCA  700

seq1  TTTCAACTTGAGTTCTTTTCAAAGTTTCTACATCTTTATTGAATTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACTTGAGTTCTTTTCAAAGTTTCTACATCTTTATTGAATTC  746

seq1: chr2_111566047_111566467
seq2: B6Ng01-245K24.g_69_489

seq1  GAATTCTATGAGGATTTTTGGATCTTGTAATTTCAATATCTTTACTTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGAGGATTTTTGGATCTTGTAATTTCAATATCTTTACTTGGG  50

seq1  CATGATTACAAGTGTAATTACTTTATAAAAATAATTTGTCTTGCAGTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTACAAGTGTAATTACTTTATAAAAATAATTTGTCTTGCAGTTGT  100

seq1  GCTGGTTAATTTTTATGTCAATCTGATACAAGCCAGAGTCATTATGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTAATTTTTATGTCAATCTGATACAAGCCAGAGTCATTATGAAGA  150

seq1  AGGAAACTTCAATTGAGAAAATTTCTCCAGATAGACAAGCCTGTGGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACTTCAATTGAGAAAATTTCTCCAGATAGACAAGCCTGTGGTATA  200

seq1  TTTTCTTGACTGATGATTTAGGTGGAAAGGCCCAGATTACTATGGGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGACTGATGATTTAGGTGGAAAGGCCCAGATTACTATGGGAAGT  250

seq1  AGCTTTCTGGGCAGATGTTTCAGGGTGGTTATGAAGCAGATTTCTGCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCTGGGCAGATGTTTCAGGGTGGTTATGAAGCAGATTTCTGCCTA  300

seq1  GTCTTATTATAATTTGTCTGGTTGATATCCCTTAAAGTCCTGCTCTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATTATAATTTGTCTGGTTGATATCCCTTAAAGTCCTGCTCTTTTC  350

seq1  TAAAAAAAAAAAAAAAAAAAGCTTGAGGAGCAGTGGATCTTGGGAAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAAAAAAAAAAAGCTTGAGGAGCAGTGGATCTTGGGAAGAAG  400

seq1  GAATGTGGGGGTAGGGTAATG  421
      |||||||||||||||||||||
seq2  GAATGTGGGGGTAGGGTAATG  421