BAC Information

Click to search

BAC

Clone NameB6Ng01-247A08
Chromosome2 (Build37)
Map Location 99,442,198 - 99,442,746
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621386
Downstream geneLOC668702, LOC100042907, LOC241572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247A08.bB6Ng01-247A08.g
ACCGA055471GA055472
length1,178995
definitionB6Ng01-247A08.b B6Ng01-247A08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcctcctccctctcctctcagatattctgaaattaagcaagag
catatgagagattcactcactcagagatcaaggctttcagcaggctaata
agcttttattaacctaaagcatattatagttttaccttctaaatgttaat
ctacgatatgtgtttataaatttggaagtatgttattaattttaatgaaa
tatccatgttgtgtcaatatgaataaaagatatattatacattaaatatt
aagtattatcaattaaaaaataacaagaaacatgaaaaggtttgctaata
ttattcgtaggaacctactttccctgttttgaaattgctgacaaatgcca
tcaacccaatggaaaatttaccagacctctgaaataacaatgtatgtttc
atagaccttttatatattcaatacaaaattagatgaagtcaaggtacatt
ccaccaaggtgacttttaaagaaattgtcaattttgttatggatatcttg
agataaagagacaagatatttttttctagatattttcgttatttacattt
caaatgctatcccctttcctggtttcccccatgaaaatcccctccaccta
ttcccgcccccctcctcctgatcaccaacccacccacttctgcttcctgg
cactggcaatcccttacatgggggcattgagccttcacaggaccaacggt
ctctcctcccttgatgactgactagggcatcctctgctacatatgcagct
ggagtcatgagtggcaccatgtgtactctttggttggctgggagctctgc
tggaactcattagttcatatcgatgttccctctatggggttgcaaacccc
ttcaactccttgggcccttttgatagctccttcattgaaggccctgtgct
ccgtccaatggatggctgtgagcatccacttctatatttgtcagcactga
cagagactctcaagagacagctatatcagtttcctgtcagcaagcacttg
ttgggaatccacatagtgtctgagtttgtgattgtattatgggatgatca
cagtggggcagttattctggatgtcatacatcagctctgctccacacttt
gtctctgtactctcaatggtatttgtctgctctagagtactgagcatcaa
tactctgagtcctttcccattccctgtc

gaattcagtgttattttcaaagggctttttcacacactagtttgttgttg
gtttttattttttttatttttttgttttctttacagatatatctcctaac
actcttgtcctctatcctccccacacctgatcacccttgctcctgtcccc
ttttccaaccaccatttgctggatccattctatttacccttctcagggag
attcatgcttcattcctatagtccacctttttctaacctctttgggtgta
tgaattgtttgtagcttgattttcttttacttaacagagtatttaaattt
acatgtgaatatattccacaattgtatttctgagtctgagttatgttact
caggtcgaattttttcttcgttcatgcatttgcctataaatttcacgaag
ttattaccttttaaattgatgagtaaaacactactatgaaaatgtacagc
atgttctttatacattctttggtaagaaatatctaaattctttctaattt
caggctattttaataaagcttctatgaacatagttgagaaagtgtctttg
tggtaggaggaaatatctttgggtatatgccaaagagtggtatagttagg
acttgaggtagattaattcccaattttatgagacagaaaaatattgattt
ccacagtggctattcaaatttgtactcccatgaacaatggaagaatattc
cccttatctacatcattggctgaatgagatatcacctgtgtaattggtct
taaacattctgtcacatatatgatggaatcttttagcgcttttaattttt
attttcctgatgtctaaggatgttgaatattgttttatatattattttgt
atataatttaatttatatattaattataattataattatatatatattgt
ttatagcagtcctttatcagatgtgaattggttaaaatcctctcccattc
tgtaatatatagcttaatggtgtccctttgtctaatagaaaacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_99442198_99442746
seq2: B6Ng01-247A08.g_68_616

seq1  GAATTCAGTGTTATTTTCAAAGGGCTTTTTCACACACTAGTTTGTTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTATTTTCAAAGGGCTTTTTCACACACTAGTTTGTTGTTG  50

seq1  GTTTTTATTTTTTTTATTTTTTTGTTTTCTTTACAGATATATCTCCTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTATTTTTTTTATTTTTTTGTTTTCTTTACAGATATATCTCCTAAC  100

seq1  ACTCTTGTCCTCTATCCTCCCCACACCTGATCACCCTTGCTCCTGTCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGTCCTCTATCCTCCCCACACCTGATCACCCTTGCTCCTGTCCCC  150

seq1  TTTTCCAACCACCATTTGCTGGATCCATTCTATTTACCCTTCTCAGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAACCACCATTTGCTGGATCCATTCTATTTACCCTTCTCAGGGAG  200

seq1  ATTCATGCTTCATTCCTATAGTCCACCTTTTTCTAACCTCTTTGGGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGCTTCATTCCTATAGTCCACCTTTTTCTAACCTCTTTGGGTGTA  250

seq1  TGAATTGTTTGTAGCTTGATTTTCTTTTACTTAACAGAGTATTTAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGTTTGTAGCTTGATTTTCTTTTACTTAACAGAGTATTTAAATTT  300

seq1  ACATGTGAATATATTCCACAATTGTATTTCTGAGTCTGAGTTATGTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGAATATATTCCACAATTGTATTTCTGAGTCTGAGTTATGTTACT  350

seq1  CAGGTCGAATTTTTTCTTCGTTCATGCATTTGCCTATAAATTTCACGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCGAATTTTTTCTTCGTTCATGCATTTGCCTATAAATTTCACGAAG  400

seq1  TTATTACCTTTTAAATTGATGAGTAAAACACTACTATGAAAATGTACAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACCTTTTAAATTGATGAGTAAAACACTACTATGAAAATGTACAGC  450

seq1  ATGTTCTTTATACATTCTTTGGTAAGAAATATCTAAATTCTTTCTAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTTATACATTCTTTGGTAAGAAATATCTAAATTCTTTCTAATTT  500

seq1  CAGGCTATTTTAATAAAGCTTCTATGAACATAGTTGAGAAAGTGTCTTT  549
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTATTTTAATAAAGCTTCTATGAACATAGTTGAGAAAGTGTCTTT  549


| Home | SequenceCutter | Blast | Download |