BAC Information

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BAC

Clone NameB6Ng01-247P12
Chromosome2 (Build37)
Map Location 142,066,070 - 142,199,486
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC668913, LOC668914, Kif16b, Snrpb2, Otor, LOC668915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247P12.bB6Ng01-247P12.g
ACCGA056166GA056167
length1,1721,034
definitionB6Ng01-247P12.b B6Ng01-247P12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,198,342 - 142,199,486)(142,066,070 - 142,067,090)
sequence
gaattctccttgttaaactacagatatgcaacaagactgcctctctagac
ctttaaggcactgccatgttggctgttggcatgctgagtgtctagcctgc
tcctggcttgtgttgcgactgttttctatatgaccctcataaagaaggac
atcaattcatggtggttcaagttatagcctccccccaacccaaataaaac
caaaactaaaacatcaccaaggtttctctgtgtaggcctggctctcctag
aactgacagtagcccaggctgacttccaattcagaggtccccctgcctag
tgcttagattaaaggtgcaggccaccacactcagcttacacaacattctt
aactgtcacatcgagagagggctgttcacatttccagatattcagaaaga
cactcaacctctcaaagcttaaatacctagtatgttttctcaacatgaat
aacaagggcatttataaattagataaaaatgctacaatacaaatatgtga
agtttttatttctgtacattttaaagagaaggtgaaatcattttacagga
ggacatccttgggggaggatgtgttaagtttactgtgccaagtggggatg
aagcaaaagatcccatgtataatcttttctgagggagacttttactggta
cagtctgtactcccagcagccatttactgatgctgacagtcaagaaatac
gacttaaacatgactgagcacatagcctgggtggtcagaacttgaagata
caaataccagtggaagtgggaggagaggaagaaagccatcttacaatttg
cagtatgagctaaggctcatttaactgaaaatgctgaacagactttttgt
attggcggttttagacagggagtgtgaagtagacagaagaattggggaga
tattattctttggtaaaaccaatgggtgccaggattagatgagccggcac
caggaggaacgcttaacacagggaagaaaatttcttccaggagcaacagg
tcctgtagtactgcttgaggttcttcctaggtaatgtctgaaagatgtga
attggtaacacacgaatagaccctttgactttccagcttggatcttgtca
gccatagttatcatactccagttctgtaaccttccagaacacttaagcac
tttggcattttgccctcattag
gaattccttcgaagttatccaaaaagagtgcatctgataagggcagactt
ctgtaaattgaccaatttggcagcaagaacaaagaacatgccagaatatt
cctgagatagagattcatatgtcatttcatggctatagcactgcccatac
tggcagtggcccactctaccaccaggagagaagaggcagatgttgtttat
cttttgctgtggtttctgatatttgttgtgatttagcatcattggctacc
ctcaaccattttttcccctagttcttgagtctgttgacaaattgctgttt
agaatgtagtaagtggggctaccagaaaagcccagtggtagagcacccac
attaaaggtatgagaccttgcatacaatcttcagcgctaatgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtagacatgcatatgtgtatatatggatgta
tacctatgcctgtgtgtctgtgtgtattgctatattctagagaagattca
ttaaagcaggtactaccctcacatgaggaaaagagacagagtattgggaa
aagaataataaagtattgggaataacaaatagaaaaaacggaatccaaaa
taagtctaaaataagactccagtaaaatttctatttggaatatattcata
acgggaattatggctgtcctagaactcactctgtagaccaggctgatctc
aaactcagaaatccacctgcctctgcctcccaagtgctggaattaaaggc
atgggccaccactgcctggctcacatgggaatttttatcaaatttcaaga
tgaggtaatcctagaaatccctactttggataattattattattattatt
actattattatataaaaagactgggataattagtgttatcaagtagtctt
ggggagagcttgacagatcattaattaaatgaacgttatttactaccaaa
ccaaaatgacagctgattttttaaagacagctttgttagggaaaatattt
gtcgaggccttagagtacgtggaaagaaagtcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142198342_142199486
seq2: B6Ng01-247P12.b_49_1220 (reverse)

seq1  CTAATGAG---CAAATG-CAAAGTGC-TAAGTGTTCTGGAA-GTTTCAGA  44
      ||||||||    ||||| |||||||| |||||||||||||| ||| ||||
seq2  CTAATGAGGGCAAAATGCCAAAGTGCTTAAGTGTTCTGGAAGGTTACAGA  50

seq1  ATTGGAGTATGAT-ACTAT-GCTGAC-AGATCC-AGCTGGAAGTTCAA--  88
      | ||||||||||| ||||| |||||| |||||| ||||||||  ||||  
seq2  ACTGGAGTATGATAACTATGGCTGACAAGATCCAAGCTGGAAAGTCAAAG  100

seq1  GGTCTATTTCGTGTGTT-CCAA-TCACATC-CTCAGACATTA-CTA-GAA  133
      |||||| |||||||||| |||| |||||||  |||||||||| ||| |||
seq2  GGTCTA-TTCGTGTGTTACCAATTCACATCTTTCAGACATTACCTAGGAA  149

seq1  GAA-CTCAAGCAGTACTACAGGA-CTGTTGCT-CTTGAAG-AATTTTCTT  179
      ||| ||||||||||||||||||| |||||||| || |||| |||||||||
seq2  GAACCTCAAGCAGTACTACAGGACCTGTTGCTCCTGGAAGAAATTTTCTT  199

seq1  -CCTGTGTT-AGCCTT-CTCCT-GTGCCGGCTCATCTAAT-CTTGCA-CC  223
       |||||||| ||| || ||||| ||||||||||||||||| || ||| ||
seq2  CCCTGTGTTAAGCGTTCCTCCTGGTGCCGGCTCATCTAATCCTGGCACCC  249

seq1  ATTGGTTTTACCAAAGAATAATATCTCCCCAATTCTTCTGTCTACTTCAC  273
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTTTACCAAAGAATAATATCTCCCCAATTCTTCTGTCTACTTCAC  299

seq1  ACTCCCTGTCTAAAACCGCCAATAC-AAAAGTCTGTTCAGCATTTTCAGT  322
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACTCCCTGTCTAAAACCGCCAATACAAAAAGTCTGTTCAGCATTTTCAGT  349

seq1  TAAATGAGCCTTAGCTCATACTGCAAATTGTAAGATGGCTTTCTTCCTCT  372
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAGCCTTAGCTCATACTGCAAATTGTAAGATGGCTTTCTTCCTCT  399

seq1  CCTCCCACTTCCACTGGTATTTGTATCTTCAAGTTCTGACCACCCAGGCT  422
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCACTTCCACTGGTATTTGTATCTTCAAGTTCTGACCACCCAGGCT  449

seq1  ATGTGCTCAGTCATGTTTAAGTCGTATTTCTTGACTGTCAGCATCAGTAA  472
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTCAGTCATGTTTAAGTCGTATTTCTTGACTGTCAGCATCAGTAA  499

seq1  ATGGCTGCTGGGAGTACAGACTGTACCAGTAAAAGTCTCCCTCAGAAAAG  522
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGCTGGGAGTACAGACTGTACCAGTAAAAGTCTCCCTCAGAAAAG  549

seq1  ATTATACATGGGATCTTTTGCTTCATCCCCACTTGGCACAGTAAACTTAA  572
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACATGGGATCTTTTGCTTCATCCCCACTTGGCACAGTAAACTTAA  599

seq1  CACATCCTCCCCCAAGGATGTCCTCCTGTAAAATGATTTCACCTTCTCTT  622
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCTCCCCCAAGGATGTCCTCCTGTAAAATGATTTCACCTTCTCTT  649

seq1  TAAAATGTACAGAAATAAAAACTTCACATATTTGTATTGTAGCATTTTTA  672
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTACAGAAATAAAAACTTCACATATTTGTATTGTAGCATTTTTA  699

seq1  TCTAATTTATAAATGCCCTTGTTATTCATGTTGAGAAAACATACTAGGTA  722
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTATAAATGCCCTTGTTATTCATGTTGAGAAAACATACTAGGTA  749

seq1  TTTAAGCTTTGAGAGGTTGAGTGTCTTTCTGAATATCTGGAAATGTGAAC  772
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCTTTGAGAGGTTGAGTGTCTTTCTGAATATCTGGAAATGTGAAC  799

seq1  AGCCCTCTCTCGATGTGACAGTTAAGAATGTTGTGTAAGCTGAGTGTGGT  822
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCTCTCGATGTGACAGTTAAGAATGTTGTGTAAGCTGAGTGTGGT  849

seq1  GGCCTGCACCTTTAATCTAAGCACTAGGCAGGGGGACCTCTGAATTGGAA  872
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGCACCTTTAATCTAAGCACTAGGCAGGGGGACCTCTGAATTGGAA  899

seq1  GTCAGCCTGGGCTACTGTCAGTTCTAGGAGAGCCAGGCCTACACAGAGAA  922
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCCTGGGCTACTGTCAGTTCTAGGAGAGCCAGGCCTACACAGAGAA  949

seq1  ACCTTGGTGATGTTTTAGTTTTGGTTTTATTTGGGTTGGGGGGAGGCTAT  972
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGTGATGTTTTAGTTTTGGTTTTATTTGGGTTGGGGGGAGGCTAT  999

seq1  AACTTGAACCACCATGAATTGATGTCCTTCTTTATGAGGGTCATATAGAA  1022
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAACCACCATGAATTGATGTCCTTCTTTATGAGGGTCATATAGAA  1049

seq1  AACAGTCGCAACACAAGCCAGGAGCAGGCTAGACACTCAGCATGCCAACA  1072
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCGCAACACAAGCCAGGAGCAGGCTAGACACTCAGCATGCCAACA  1099

seq1  GCCAACATGGCAGTGCCTTAAAGGTCTAGAGAGGCAGTCTTGTTGCATAT  1122
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACATGGCAGTGCCTTAAAGGTCTAGAGAGGCAGTCTTGTTGCATAT  1149

seq1  CTGTAGTTTAACAAGGAGAATTC  1145
      |||||||||||||||||||||||
seq2  CTGTAGTTTAACAAGGAGAATTC  1172

seq1: chr2_142066070_142067090
seq2: B6Ng01-247P12.g_67_1100

seq1  GAATTCCTTCGAAGTTATCCAAAAAGAGTGCATCTGATAAGGGCAGACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCGAAGTTATCCAAAAAGAGTGCATCTGATAAGGGCAGACTT  50

seq1  CTGTAAATTGACCAATTTGGCAGCAAGAACAAAGAACATGCCAGAATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAATTGACCAATTTGGCAGCAAGAACAAAGAACATGCCAGAATATT  100

seq1  CCTGAGATAGAGATTCATATGTCATTTCATGGCTATAGCACTGCCCATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGATAGAGATTCATATGTCATTTCATGGCTATAGCACTGCCCATAC  150

seq1  TGGCAGTGGCCCACTCTACCACCAGGAGAGAAGAGGCAGATGTTGTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTGGCCCACTCTACCACCAGGAGAGAAGAGGCAGATGTTGTTTAT  200

seq1  CTTTTGCTGTGGTTTCTGATATTTGTTGTGATTTAGCATCATTGGCTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCTGTGGTTTCTGATATTTGTTGTGATTTAGCATCATTGGCTACC  250

seq1  CTCAACCATTTTTTCCCCTAGTTCTTGAGTCTGTTGACAAATTGCTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCATTTTTTCCCCTAGTTCTTGAGTCTGTTGACAAATTGCTGTTT  300

seq1  AGAATGTAGTAAGTGGGGCTACCAGAAAAGCCCAGTGGTAGAGCACCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTAGTAAGTGGGGCTACCAGAAAAGCCCAGTGGTAGAGCACCCAC  350

seq1  ATTAAAGGTATGAGACCTTGCATACAATCTTCAGCGCTAATGTGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGTATGAGACCTTGCATACAATCTTCAGCGCTAATGTGTGTGTG  400

seq1  TGTGTGTGTGTGTGTGTGTGTAGACATGCATATGTGTATATATGGATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTAGACATGCATATGTGTATATATGGATGTA  450

seq1  TACCTATGCCTGTGTGTCTGTGTGTATTGCTATATTCTAGAGAAGATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATGCCTGTGTGTCTGTGTGTATTGCTATATTCTAGAGAAGATTCA  500

seq1  TTAAAGCAGGTACTACCCTCACATGAGGAAAAGAGACAGAGTATTGGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCAGGTACTACCCTCACATGAGGAAAAGAGACAGAGTATTGGGAA  550

seq1  AAGAATAATAAAGTATTGGGAATAACAAATAGAAAAAACGGAATCCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAATAAAGTATTGGGAATAACAAATAGAAAAAACGGAATCCAAAA  600

seq1  TAAGTCTAAAATAAGACTCCAGTAAAA-TTCTATTTGGAATATATTCATA  649
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAAGTCTAAAATAAGACTCCAGTAAAATTTCTATTTGGAATATATTCATA  650

seq1  ACGGGAATTATGGCTGTCCTAGAACTCACTCTGTAGACCAGGCTGATCTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGAATTATGGCTGTCCTAGAACTCACTCTGTAGACCAGGCTGATCTC  700

seq1  AAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGC  750

seq1  ATGGGCCACCACTGCCTGGCTCACAATGGGAATTTTTATCAAA-TTCAAG  798
      |||||||||||||||||||||||| |||||||||||||||||| ||||||
seq2  ATGGGCCACCACTGCCTGGCTCAC-ATGGGAATTTTTATCAAATTTCAAG  799

seq1  ATGAGGTAATCCTAGAAATCCCTACTTTGTAT-ATTATTATTATTATTAT  847
      ||||||||||||||||||||||||||||| || |||||||||||||||||
seq2  ATGAGGTAATCCTAGAAATCCCTACTTTGGATAATTATTATTATTATTAT  849

seq1  TATTATTATTATATAAAAAGACT-GGATAATTAGTGTTATC-AGTAGTCT  895
      || |||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  TACTATTATTATATAAAAAGACTGGGATAATTAGTGTTATCAAGTAGTCT  899

seq1  T-GGGAGAG-TTGACAGATTTATTAA-TAAATGAACGTAATTTA-TACTA  941
      | ||||||| |||||||| | ||||| ||||||||||| ||||| ||| |
seq2  TGGGGAGAGCTTGACAGA-TCATTAATTAAATGAACGTTATTTACTACCA  948

seq1  AACCAAAATGACAGCTGA-TTTTTAAAGACAGC-TTGATAGGGAAAA-AA  988
      |||||||||||||||||| |||||||||||||| ||| ||||||||| | 
seq2  AACCAAAATGACAGCTGATTTTTTAAAGACAGCTTTGTTAGGGAAAATAT  998

seq1  TTGT-GAGGCCTTAGAG-ATGTGG-AAGAGAGTCGT  1021
      |||| |||||||||||| | |||| |||| ||||||
seq2  TTGTCGAGGCCTTAGAGTACGTGGAAAGAAAGTCGT  1034