MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-248A07
Chromosome	2 (Build37)
Map Location	172,069,599 - 172,231,845
singlet/doublet	doublet
Overlap gene	Mc3r, 2010011I20Rik, Aurka, Cstf1, F730031O20Rik
Upstream gene	LOC100043744, Cbln4
Downstream gene	2410001C21Rik, A330041C17Rik, 1700029J11Rik, LOC629957, Tcfap2c, LOC100043750, Bmp7, LOC100043751, Spo11, Rae1, Rbm38, Ctcfl, EG619800, Pck1, Zbp1, Tmepai
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100043744 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043744
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Cbln4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228942 MGI:2154433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mc3r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17201 MGI:96929
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2010011I20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67017 MGI:1914267
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aurka (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20878 MGI:894678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cstf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67337 MGI:1914587
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F730031O20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320664 MGI:2444482
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2410001C21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66404 MGI:1913654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A330041C17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:654821 MGI:3606143
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700029J11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76426 MGI:1923676
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 2 Proteins

name	LOC629957 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 494 ESTs, 5 Proteins

name	Tcfap2c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21420 MGI:106032
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043750 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043750
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Bmp7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12162 MGI:103302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043751 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Spo11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26972 MGI:1349669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rae1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66679 MGI:1913929
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm38 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56190 MGI:1889294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctcfl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664799 MGI:3652571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG619800 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619800 MGI:3648376
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	Pck1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18534 MGI:97501
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58203 MGI:1927449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmepai (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65112 MGI:1929600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043744 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250137 GeneID:100043744
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to retinitis pigmentosa GTPase regulator transcript_id : XM_001480868.1

name	Cbln4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345266 GeneID:228942 MGI:2154433
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cerebellin 4 precursor protein transcript_id : NM_175631.2

name	Mc3r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371951 GeneID:17201 MGI:96929
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : melanocortin 3 receptor transcript_id : NM_008561.3

name	2010011I20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353140 GeneID:67017 MGI:1914267
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010011I20 gene transcript_id : NM_025912.3

name	Aurka (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130130 GeneID:20878 MGI:894678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aurora kinase A transcript_id : NM_011497.3

name	Cstf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892406 GeneID:67337 MGI:1914587
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cleavage stimulation factor, 3' pre-RNA, subunit 1 transcript_id : NM_024199.2

name	F730031O20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131077 GeneID:320664 MGI:2444482
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA F730031O20 gene transcript_id : NM_001033538.2

name	F730031O20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249363 GeneID:320664 MGI:2444482
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA F730031O20 gene transcript_id : NM_001080820.1

name	2410001C21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803188 GeneID:66404 MGI:1913654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410001C21 gene transcript_id : NM_025542.2

name	A330041C17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386907 GeneID:654821 MGI:3606143
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A330041C17 gene transcript_id : NM_001039560.2

name	1700029J11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94367448 GeneID:76426 MGI:1923676
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 2 Proteins product : RIKEN cDNA 1700029J11 gene transcript_id : XM_130728.5

name	LOC629957 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250265 GeneID:629957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 494 ESTs, 5 Proteins product : similar to 40S ribosomal protein S29 transcript_id : XM_894924.3

name	Tcfap2c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678252 GeneID:21420 MGI:106032
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor AP-2, gamma transcript_id : NM_009335.1

name	LOC100043750 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250139 GeneID:100043750
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to gamma-aminobutyric acid A receptor, epsilon transcript_id : XM_001480881.1

name	Bmp7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982486 GeneID:12162 MGI:103302
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bone morphogenetic protein 7 transcript_id : NM_007557.2

name	LOC100043751 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250141 GeneID:100043751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043751 transcript_id : XM_001480886.1

name	Spo11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755623 GeneID:26972 MGI:1349669
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae) transcript_id : NM_012046.1

name	Rae1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803370 GeneID:66679 MGI:1913929
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAE1 RNA export 1 homolog (S. pombe) transcript_id : NM_175112.3

name	Rbm38 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053932 GeneID:56190 MGI:1889294
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 38 transcript_id : NM_019547.2

name	Ctcfl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487068 GeneID:664799 MGI:3652571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CCCTC-binding factor (zinc finger protein)-like transcript_id : NM_001081387.1

name	EG619800 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82887848 GeneID:619800 MGI:3648376
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : predicted gene, EG619800 transcript_id : XM_884173.1

name	Pck1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130217 GeneID:18534 MGI:97501
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoenolpyruvate carboxykinase 1, cytosolic transcript_id : NM_011044.2

name	Zbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11496252 GeneID:58203 MGI:1927449
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Z-DNA binding protein 1 transcript_id : NM_021394.1

name	Tmepai (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119508427 GeneID:65112 MGI:1929600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane, prostate androgen induced RNA transcript_id : NM_022995.3

name	LOC100043744 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250138 GeneID:100043744
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480918.1

name	Cbln4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28274690 CCDS:CCDS17126.1 GeneID:228942 MGI:2154433
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : cerebellin 4 precursor protein_id : NP_783439.1

name	Mc3r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678822 CCDS:CCDS17127.1 GeneID:17201 MGI:96929
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : melanocortin 3 receptor protein_id : NP_032587.1

name	2010011I20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541856 CCDS:CCDS17128.1 GeneID:67017 MGI:1914267
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC67017 protein_id : NP_080188.2

name	Aurka (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46358064 CCDS:CCDS17129.1 GeneID:20878 MGI:894678
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0031625 - ubiquitin protein ligase binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0000278 - mitotic cell cycle [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : aurora A; serine/threonine kinase 6 product : serine/threonine protein kinase 6 protein_id : NP_035627.1

name	Cstf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13195628 CCDS:CCDS17130.1 GeneID:67337 MGI:1914587
definition	GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 product : cleavage stimulation factor, 3' pre-RNA, subunit 1 protein_id : NP_077161.1

name	F730031O20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249364 GeneID:320664 MGI:2444482
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2; likely orthologue of H. sapiens chromosome 20 open reading frame 32 (C20orf32) product : HEF-like protein isoform 2 protein_id : NP_001074289.1

name	F730031O20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677627 CCDS:CCDS17131.1 GeneID:320664 MGI:2444482
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1; likely orthologue of H. sapiens chromosome 20 open reading frame 32 (C20orf32) product : HEF-like protein isoform 1 protein_id : NP_001028710.1

name	2410001C21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794468 CCDS:CCDS17132.1 GeneID:66404 MGI:1913654
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : likely orthologue of H. sapiens chromosome 20 open reading frame 43 (C20orf43) product : hypothetical protein LOC66404 protein_id : NP_079818.1

name	A330041C17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88319968 CCDS:CCDS17133.1 GeneID:654821 MGI:3606143
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008375 - acetylglucosaminyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : likely orthologue of H. sapiens chromosome 20 open reading frame 105 (C20orf105) product : hypothetical protein LOC654821 protein_id : NP_001034649.1

name	1700029J11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63492721 GeneID:76426 MGI:1923676
definition	codon_start : 1 product : hypothetical protein LOC76426 protein_id : XP_130728.3

name	LOC629957 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82887393 GeneID:629957
definition	codon_start : 1 product : similar to 40S ribosomal protein S29 protein_id : XP_900017.1

name	Tcfap2c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678253 CCDS:CCDS17135.1 GeneID:21420 MGI:106032
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA] [Evidence IMP] GO_process : GO:0030154 - cell differentiation [Evidence IMP]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation function : transcription factor product : transcription factor AP-2, gamma protein_id : NP_033361.1

name	LOC100043750 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250140 GeneID:100043750
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480931.1

name	Bmp7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982487 CCDS:CCDS17136.1 GeneID:12162 MGI:103302
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005125 - cytokine activity [Evidence TAS]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007411 - axon guidance [Evidence IDA]; GO:0030509 - BMP signaling pathway [Evidence IDA]; GO:0048754 - branching morphogenesis of a tube [Evidence IDA]; GO:0051216 - cartilage development [Evidence IEA]; GO:0048468 - cell development [Evidence IDA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0048595 - eye morphogenesis (sensu Mammalia) [Evidence IMP]; GO:0040007 - growth [Evidence IEA]; GO:0001822 - kidney development [Evidence IMP]; GO:0001707 - mesoderm formation [Evidence IGI]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0001503 - ossification [Evidence IEA]; GO:0007389 - pattern specification [Evidence IMP]; GO:0045597 - positive regulation of cell differentiation [Evidence IDA]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0035239 - tube morphogenesis [Evidence IDA] codon_start : 1 note : osteogenic protein 1 product : bone morphogenetic protein 7 protein_id : NP_031583.2

name	LOC100043751 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250142 GeneID:100043751
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480936.1

name	Spo11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755624 CCDS:CCDS17137.1 GeneID:26972 MGI:1349669
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase (ATP-hydrolyzing) activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]; GO:0007126 - meiosis [Evidence IEA]; GO:0007131 - meiotic recombination [Evidence IEA]; GO:0001541 - ovarian follicle development [Evidence IMP] codon_start : 1 function : believed to initiate meiotic recombination through formation of a covalent protein-DNA intermediate resulting in a double strand break note : sporulation protein, meiosis-specific, SPO11 homolog (S. cervisiae) product : sporulation protein, meiosis-specific, SPO11 homolog protein_id : NP_036176.1

name	Rae1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28201956 CCDS:CCDS17138.1 GeneID:66679 MGI:1913929
definition	codon_start : 1 product : RAE1 RNA export 1 homolog protein_id : NP_780321.1

name	Rbm38 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134053933 CCDS:CCDS17139.1 GeneID:56190 MGI:1889294
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : seb4 mRNA; RNA-binding region (RNP1, RRM) containing 1; seb4-like product : seb4 protein_id : NP_062420.2

name	Ctcfl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487069 GeneID:664799 MGI:3652571
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : BORIS; likely orthologue of H. sapiens CCCTC-binding factor-like protein (CTCFL) product : CCCTC-binding factor (zinc finger protein)-like protein_id : NP_001074856.1

name	EG619800 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82887849 GeneID:619800 MGI:3648376
definition	codon_start : 1 product : similar to ubiquitin A-52 residue ribosomal protein fusion product 1 protein_id : XP_889266.1

name	Pck1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7110683 CCDS:CCDS17141.1 GeneID:18534 MGI:97501
definition	GO_function : GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004613 - phosphoenolpyruvate carboxykinase (GTP) activity [Evidence IEA]; GO:0004611 - phosphoenolpyruvate carboxykinase activity [Evidence IMP] GO_process : GO:0006094 - gluconeogenesis [Evidence IDA]; GO:0046327 - glycerol biosynthesis from pyruvate [Evidence IMP]; GO:0006629 - lipid metabolism [Evidence IMP] codon_start : 1 product : phosphoenolpyruvate carboxykinase 1, cytosolic protein_id : NP_035174.1

name	Zbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11496253 CCDS:CCDS17142.1 GeneID:58203 MGI:1927449
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003726 - double-stranded RNA adenosine deaminase activity [Evidence IEA]; GO:0003692 - left-handed Z-DNA binding [Evidence IDA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : tumor stroma and activated macrophage protein DLM-1 product : Z-DNA binding protein 1 protein_id : NP_067369.1

name	Tmepai (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119508428 GeneID:65112 MGI:1929600
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS] [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030521 - androgen receptor signaling pathway [Evidence ISS]; GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : Nedd4 WW binding protein 4 product : transmembrane prostate androgen-induced protein protein_id : NP_075371.2

clone name	MSMg01-370N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473F07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-123I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081N06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-248A07.b	B6Ng01-248A07.g
ACC	GA056201	GA056202
length	1,121	1,154
definition	B6Ng01-248A07.b	B6Ng01-248A07.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(172,230,725 - 172,231,845)	(172,069,599 - 172,070,738)
sequence	gaattcttagtttttagggaaggtgaaagactcacttcccttctgaggcc cacaaaaggatggttacatggaaactacacttaaaaagaaaatacactac agggctggagagatggttcagcagttaagagcaatggctgctcttccaga ggtccacaggttcaatccccagcacccacgtggtggctccctcacattgg taactccagtaccaggggatccagcaccctcctctgacttccatgggcac tgggcacatatgtggtacacacacgtatacacaggcaaaacacacagaca caaacatacagacaatgatacacagacacacagacacacacacacacaca cgataagaaagcaacactggccagtgagacggctcaatgggtggcagtgc tttatgtgcaagcctgaggatgctagtttgagccctgaaaccaacacaag ggagggaacccactctacagagttgctgtctgccctccacacccaaacca tggcacaaatgcaccacctaacaccaaatacacaccctaacaataaatca aagtgtaaaagaacacatagaccgtgcacgtgggaagtcagtggatatat gggacatggaggaggcctcccacagagcctgctatatatcttttatttta aattttatttacatgggtattttgcctccatgtatgtctgtaggagggtg tgctataccctggagctggaattagagacagttgtagaactgccacacgg gtggtgggatttgaacctgggtcctttggaaaagaactagccagtgcctc ttaaccactgagccatctctccagccccaaactccacagctttatgagga agctaagcttgaggacagtctggattgtctggatgcagagctcagctagg aatgaccaaagctgagcagatggtctttctagcccactggactgagaatc cttcacttttccatcctttaaacaaaacaaagtatattattgtttagaaa aaaagaaagaaaagtttctagagcagaataaaaaccccctgaccacctcc tagctccccaccacactctctgaaaagggacgaggggagtcccggaagaa gagcagaaagtcctggagtga	gaattcccacgtgtgctggtaccagatggcaaacacgggcagacactgtc atatcttccaattattaagataaagtcaatttacttatagaaggttccac tgaaatgaaaaattacatctgtgtggttgtctcaaaaaccaggggagagg tggtgttcagaggccaactaggtgatccttagcagttggagtatagacac agttttaggactaaatccccagccagcagctacgacaagccaagctccaa cgctcaatccaatactctaattaaagagccaacatgtaaagatggagaga tggttccgtcagcaaagtgcttattgcaaagcccgaagattgcttctgaa ctctcctgtaaacacacaaagaatctgggtgtgtttattatgggaatccc agtgctttgcagacagaggcaagaggatccaatctctggggggtcggggg agaggcgtgtcaatgattagttagcctagtgtaaccaacaagctctgagg tcagtgagagaccctgcctcaaaagcaaggtggagaacacttaagaaata ctgaagattagcctcaggcccccacatacacacatgcaagcattttgcaa ctacatacccatatatgtgtgcatacacaaacacaggctcacataaaata taaaataggcatgtaacagtgaaagacatagagaagagatttaatccatg ttacagcaagtctatctcttgagcactgagctgagctttaagctaaatga aagctaaaggtagacatgcttatgtagtcctggccaaggtaccatcttgc ccgtcactgatctattgttgtctcagctgtggggtggtgttatccccaga ggtcactagtgtacaagatggtgaggtcagaaactcaccctcagggacag ttgccccatctgggagggactggggtctgtggaatctacgtgccttcact cattaaagtgaagagtcgttcgaggtagaacgctgggtttgggacaatag tccattctggtcatcagtccctaaagagggatacttaagtttggtttagg taaggcagacacaagatggagggcagaagtcctggatctttccacgattc tttttagtttacttgtggcccaagtgaggattctaagcctaggggcattt gtcg
quality values	Open. Hide. 58 33 30 28 58 58 58 54 54 58 58 58 58 58 41 34 58 62 62 62 62 62 49 39 62 49 62 62 62 47 33 62 39 31 51 41 46 36 30 36 51 62 62 62 62 54 47 49 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 54 54 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 45 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 58 58 58 54 58 58 58 58 58 58 47 58 58 58 58 58 54 54 58 54 54 47 58 58 58 58 58 54 54 46 58 58 58 58 54 52 58 58 58 58 58 58 58 58 52 46 58 58 58 58 58 58 58 54 58 58 58 54 58 58 54 58 58 58 52 58 54 52 54 54 54 58 58 52 58 43 41 52 51 58 54 47 41 58 58 58 58 58 58 50 50 53 53 54 51 52 58 49 51 31 50 53 51 49 58 58 58 51 50 51 58 58 58 45 37 58 58 25 45 25 54 51 50 58 48 50 48 50 50 39 26 51 51 50 58 51 51 50 53 41 53 53 58 53 54 58 58 50 50 51 58 58 40 42 58 58 49 58 58 53 53 38 58 50 40 50 40 51 58 58 58 50 50 40 58 58 44 43 42 43 50 53 37 27 50 47 38 41 53 53 49 41 52 58 32 26 10 28 46 18 58 58 32 51 53 53 53 45 42 42 53 51 54 51 38 28 10 44 18 54 53 35 51 53 27 29 53 38 37 54 42 41 45 37 41 52 54 41 39 39 22 27 14 26 43 53 41 32 22 40 38 41 14 54 28 24 45 54 40 46 36 51 30 27 54 39 33 33 32 35 32 33 37 54 54 39 34 53 53 54 26 27 32 33 47 53 48 18 40 14 23 35 40 24 25 31 28 53 32 40 23 52 40 40 51 45 29 45 18 41 32 32 36 37 52 17 30 29 21 42 31 41 34 43 30 31 26 33 21 45 40 25 23 45 33 32 28 13 31 22 28 30 28 17 14 46 36 31 39 31 51 9 41 33 33 17 31 31 13 36 12 33 35 31 31 22 6 10 32 16 14 14 31 37 37 31 24 21 21 32 30 15 31 29 30 27 25 23 31 20 14 10 21 7 31 38 34 31 8 12 9 5 14 13 28 26 31 30 34 18 26 17 46 21 21 13 25 21 41 6 23 31 20 11 11 31 25 27 20 26 17 26 11 8 20 30 15 44 17 26 16 24 30 21 38 15 25 31 31 6 6 24 14 22 25 13 10 14 22 9 6 32 48 18 18 17 15 19 12 19 17 43 18 33 31 25 4 17 24 31 22 26 21 33 12 14 21 31 32 19 24 10 14 17 6 6 13 27 19 13 6 19 31 13 16 5 12 9 5 11 21 9 9 16 10 30 6 6 22 27 9 20 5 27 7 9 6 27 25 4 5 23 11 25 34 28 30 9 14 27 27 9 11 5 14 28 14 12 6 9 6 20 6 9 13 23 8 7 21 10 30 17 15 4 3 8 13 5 14 9 24 10 18 8 22 12 17 29 17 21 8 28 9 5 2 3 8 5 22 3 3 3 14 8 11 23 17 9 5 4 6 8 3 5 4 14 4 4 6 5 9 11 4 6 9 7 7 12 4 4 10 1 2 2 3	Open. Hide. 62 47 43 47 62 62 62 47 47 62 49 47 44 42 44 32 32 43 38 35 43 59 44 59 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 59 59 59 59 62 62 62 62 62 62 62 62 59 46 54 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 47 47 62 35 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 49 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 58 58 58 58 58 54 58 58 58 54 58 54 54 41 58 54 54 58 54 58 58 54 58 58 45 33 58 52 58 54 58 58 58 58 54 58 52 54 41 58 58 58 58 58 58 58 54 42 58 58 54 54 54 58 54 58 58 54 58 58 58 42 58 42 40 54 54 58 46 58 58 50 58 58 49 50 51 51 58 58 58 58 39 42 32 53 53 50 58 58 58 53 53 33 49 50 58 58 58 58 50 51 52 54 52 58 52 58 50 58 52 58 58 58 52 58 49 58 50 51 58 58 58 58 50 50 50 51 51 50 58 46 58 46 49 58 43 42 58 53 58 58 58 51 53 58 51 51 50 39 58 39 58 40 51 34 58 46 58 37 58 49 28 43 49 54 50 40 50 47 53 53 58 49 37 49 41 47 39 58 58 50 40 41 23 44 37 30 51 51 42 31 50 47 41 42 53 47 51 54 39 37 49 24 30 49 41 42 54 40 49 54 41 54 27 33 39 49 54 34 47 47 33 42 24 45 53 51 37 42 52 40 30 47 37 27 35 41 37 53 42 42 52 45 38 34 35 44 52 34 39 37 33 44 39 33 13 44 41 32 31 13 40 43 53 53 28 53 29 34 32 24 53 53 37 34 34 52 33 31 34 52 36 51 45 19 28 18 35 36 33 27 26 42 32 33 16 27 31 31 45 31 31 32 39 36 31 43 34 33 23 32 28 35 28 24 24 36 25 31 26 31 42 31 26 30 21 46 38 31 24 29 31 39 43 42 33 31 31 37 42 29 22 31 26 33 33 26 31 31 36 31 23 30 31 32 26 34 46 46 46 17 35 11 15 36 18 27 22 38 34 46 46 29 30 14 12 11 32 18 32 35 31 31 31 30 37 35 26 27 31 10 31 25 29 15 28 31 31 31 42 32 39 25 43 33 28 36 47 11 25 32 34 24 26 28 20 34 36 32 20 41 25 26 19 31 36 32 30 25 35 33 28 13 7 13 14 19 17 44 9 32 33 48 31 15 8 20 24 44 41 26 19 13 21 20 9 10 31 15 11 23 11 21 18 32 9 23 22 25 26 25 32 18 10 16 19 31 25 37 34 32 48 33 17 13 21 30 30 5 13 15 24 26 11 17 6 33 16 22 9 37 11 7 6 12 9 6 10 11 16 10 25 19 9 27 15 11 40 18 11 5 4 9 28 28 20 19 13 12 22 28 16 13 7 15 11 15 11 7 13 18 24 8 4 25 32 16 28 27 38 8 5 15 8 40 19 23 10 9 12 7 8 10 27 18 15 34 16 14 21 7 27 8 17 18 14 14 12 13 25 11 18 21 9 22 8 6 7 3 6 9 22 9 7 6 22 9 21 17 4 7 12 23 24 11 18 19 13 3 6 2 1 1 7 4 18 19 7 6 3 3 5 6 7 13 7 8 22 29 28 14 11 3 1 20 14 15 27 5 6 15 4 4 3 2 13 9 7 6 15 16 10 21 11 13 5 11 13 9 5 11 16 5 6 6 21 9 17 17 3 2 2 1 6 23 5 4 3 6 1

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_172230725_172231845
seq2: B6Ng01-248A07.b_47_1167 (reverse)

seq1  TCACTC--AGACTCTCTGCTTCTTCCTCCGGGCCTCCCCCTCCTTCCCTT  48
      ||||||   |||| ||||| ||||| |||||| ||||||   | ||||||
seq2  TCACTCCAGGACTTTCTGC-TCTTCTTCCGGGACTCCCC--TCGTCCCTT  47

seq1  TTCAGAGAGTGTGGGTGGGGAGCTTAGAGGTGGTCAGGGGGTTTTTATCT  98
      |||||||||||| |||||||||||  ||||||||||||||||||||||  
seq2  TTCAGAGAGTGT-GGTGGGGAGCTAGGAGGTGGTCAGGGGGTTTTTATTC  96

seq1  TGCTCTTGGAAACTTTTCTTTCTTTTTTTCTAAAC-ATAATATACTTTGT  147
      ||||| | ||||||||||||||||||||||||||| ||||||||||||||
seq2  TGCTC-TAGAAACTTTTCTTTCTTTTTTTCTAAACAATAATATACTTTGT  145

seq1  TTTGTTTTAAAGGATGG-AAAGTG-AGGATTCTCAGTCCAGT-GGCTAGA  194
      |||| |||||||||||| |||||| ||||||||||||||||| |||||||
seq2  TTTG-TTTAAAGGATGGAAAAGTGAAGGATTCTCAGTCCAGTGGGCTAGA  194

seq1  AAGACCATCTGCTCAGCTTTGGTCATTCCTAGCTGAGCTCTGCATCCAGA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCATCTGCTCAGCTTTGGTCATTCCTAGCTGAGCTCTGCATCCAGA  244

seq1  CAATCCAGACTGTCCTCAAGCTTAGCTTCCTCATAAAGCTGTGGAGTTTG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCAGACTGTCCTCAAGCTTAGCTTCCTCATAAAGCTGTGGAGTTTG  294

seq1  GGGCTGGAGAGATGGCTCAGTGGTTAAGAGGCACTGGCTAGTTCTTTTCC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGAGAGATGGCTCAGTGGTTAAGAGGCACTGGCTAGTTCTTTTCC  344

seq1  AAAGGACCCAGGTTCAAATCCCACCACCCGTGTGGCAGTTCTACAACTGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACCCAGGTTCAAATCCCACCACCCGTGTGGCAGTTCTACAACTGT  394

seq1  CTCTAATTCCAGCTCCAGGGTATAGCACACCCTCCTACAGACATACATGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATTCCAGCTCCAGGGTATAGCACACCCTCCTACAGACATACATGG  444

seq1  AGGCAAAATACCCATGTAAATAAAATTTAAAATAAAAGATATATAGCAGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAATACCCATGTAAATAAAATTTAAAATAAAAGATATATAGCAGG  494

seq1  CTCTGTGGGAGGCCTCCTCCATGTCCCATATATCCACTGACTTCCCACGT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGGGAGGCCTCCTCCATGTCCCATATATCCACTGACTTCCCACGT  544

seq1  GCACGGTCTATGTGTTCTTTTACACTTTGATTTATTGTTAGGGTGTGTAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGGTCTATGTGTTCTTTTACACTTTGATTTATTGTTAGGGTGTGTAT  594

seq1  TTGGTGTTAGGTGGTGCATTTGTGCCATGGTTTGGGTGTGGAGGGCAGAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTTAGGTGGTGCATTTGTGCCATGGTTTGGGTGTGGAGGGCAGAC  644

seq1  AGCAACTCTGTAGAGTGGGTTCCCTCCCTTGTGTTGGTTTCAGGGCTCAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTCTGTAGAGTGGGTTCCCTCCCTTGTGTTGGTTTCAGGGCTCAA  694

seq1  ACTAGCATCCTCAGGCTTGCACATAAAGCACTGCCACCCATTGAGCCGTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCATCCTCAGGCTTGCACATAAAGCACTGCCACCCATTGAGCCGTC  744

seq1  TCACTGGCCAGTGTTGCTTTCTTATCGTGTGTGTGTGTGTGTGTCTGTGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGCCAGTGTTGCTTTCTTATCGTGTGTGTGTGTGTGTGTCTGTGT  794

seq1  GTCTGTGTATCATTGTCTGTATGTTTGTGTCTGTGTGTTTTGCCTGTGTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTATCATTGTCTGTATGTTTGTGTCTGTGTGTTTTGCCTGTGTA  844

seq1  TACGTGTGTGTACCACATATGTGCCCAGTGCCCATGGAAGTCAGAGGAGG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTGTGTGTACCACATATGTGCCCAGTGCCCATGGAAGTCAGAGGAGG  894

seq1  GTGCTGGATCCCCTGGTACTGGAGTTACCAATGTGAGGGAGCCACCACGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGATCCCCTGGTACTGGAGTTACCAATGTGAGGGAGCCACCACGT  944

seq1  GGGTGCTGGGGATTGAACCTGTGGACCTCTGGAAGAGCAGCCATTGCTCT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTGGGGATTGAACCTGTGGACCTCTGGAAGAGCAGCCATTGCTCT  994

seq1  TAACTGCTGAACCATCTCTCCAGCCCTGTAGTGTATTTTCTTTTTAAGTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCTGAACCATCTCTCCAGCCCTGTAGTGTATTTTCTTTTTAAGTG  1044

seq1  TAGTTTCCATGTAACCATCCTTTTGTGGGCCTCAGAAGGGAAGTGAGTCT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCCATGTAACCATCCTTTTGTGGGCCTCAGAAGGGAAGTGAGTCT  1094

seq1  TTCACCTTCCCTAAAAACTAAGAATTC  1121
      |||||||||||||||||||||||||||
seq2  TTCACCTTCCCTAAAAACTAAGAATTC  1121

seq1: chr2_172069599_172070738
seq2: B6Ng01-248A07.g_67_1220

seq1  GAATTCCCACGTGTGCTGGTACCAGATGGCAAACACGGGCAGACACTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACGTGTGCTGGTACCAGATGGCAAACACGGGCAGACACTGTC  50

seq1  ATATCTTCCAATTATTAAGATAAAGTCAATTTACTTATAGAAGGTTCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTCCAATTATTAAGATAAAGTCAATTTACTTATAGAAGGTTCCAC  100

seq1  TGAAATGAAAAATTACATCTGTGTGGTTGTCTCAAAAACCAGGGGAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGAAAAATTACATCTGTGTGGTTGTCTCAAAAACCAGGGGAGAGG  150

seq1  TGGTGTTCAGAGGCCAACTAGGTGATCCTTAGCAGTTGGAGTATAGACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTCAGAGGCCAACTAGGTGATCCTTAGCAGTTGGAGTATAGACAC  200

seq1  AGTTTTAGGACTAAATCCCCAGCCAGCAGCTACGACAAGCCAAGCTCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAGGACTAAATCCCCAGCCAGCAGCTACGACAAGCCAAGCTCCAA  250

seq1  CGCTCAATCCAATACTCTAATTAAAGAGCCAACATGTAAAGATGGAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCAATCCAATACTCTAATTAAAGAGCCAACATGTAAAGATGGAGAGA  300

seq1  TGGTTCCGTCAGCAAAGTGCTTATTGCAAAGCCCGAAGATTGCTTCTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCGTCAGCAAAGTGCTTATTGCAAAGCCCGAAGATTGCTTCTGAA  350

seq1  CTCTCCTGTAAACACACAAAGAATCTGGGTGTGTTTATTATGGGAATCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTGTAAACACACAAAGAATCTGGGTGTGTTTATTATGGGAATCCC  400

seq1  AGTGCTTTGCAGACAGAGGCAAGAGGATCCAATCTCTGGGGGGTCGGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTTGCAGACAGAGGCAAGAGGATCCAATCTCTGGGGGGTCGGGGG  450

seq1  AGAGGCGTGTCAATGATTAGTTAGCCTAGTGTAACCAACAAGCTCTGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCGTGTCAATGATTAGTTAGCCTAGTGTAACCAACAAGCTCTGAGG  500

seq1  TCAGTGAGAGACCCTGCCTCAAAAGCAAGGTGGAGAACACTTAAGAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAGAGACCCTGCCTCAAAAGCAAGGTGGAGAACACTTAAGAAATA  550

seq1  CTGAAGATTAGCCTCAGGCCCCCACATACACACATGCAAGCATTTTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGATTAGCCTCAGGCCCCCACATACACACATGCAAGCATTTTGCAA  600

seq1  CTACATACCCATATATGTGTGCATACACAAACACAGGCTCACATAAAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATACCCATATATGTGTGCATACACAAACACAGGCTCACATAAAATA  650

seq1  TAAAATAGGCATGTAACAGTGAAAGACATAGAGAAGAGATTTAATCCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGGCATGTAACAGTGAAAGACATAGAGAAGAGATTTAATCCATG  700

seq1  TTACAGCAAGTCTATCTCTTGAGCACTGAGCTGAGCTTTAAGCTAAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCAAGTCTATCTCTTGAGCACTGAGCTGAGCTTTAAGCTAAATGA  750

seq1  AAGCTAAAGGTAGACATGCTTATGTAGTCCTGGCCAAGGTACCATCTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAAAGGTAGACATGCTTATGTAGTCCTGGCCAAGGTACCATCTTGC  800

seq1  CCGTCACTGATCTATTGTTGTCTCAGCTGTGGGGTGGTGTTATCCCCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCACTGATCTATTGTTGTCTCAGCTGTGGGGTGGTGTTATCCCCAGA  850

seq1  GGTCACTAGTGTACAAGATGGTGAGGTCAGAAACTCACCCTCAGGGACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACTAGTGTACAAGATGGTGAGGTCAGAAACTCACCCTCAGGGACAG  900

seq1  TTGCCCCCATCT-GGAGGGACT-GGGTCTGTGG-ATCTACGTGCCTTCAC  947
      ||| |||||||| ||||||||| |||||||||| ||||||||||||||||
seq2  TTG-CCCCATCTGGGAGGGACTGGGGTCTGTGGAATCTACGTGCCTTCAC  949

seq1  TCATTAAAGTGAAGAGTCGTCCGAGGTAG-ACGCT-GGTTTGGGACAATA  995
      |||||||||||||||||||| |||||||| ||||| ||||||||||||||
seq2  TCATTAAAGTGAAGAGTCGTTCGAGGTAGAACGCTGGGTTTGGGACAATA  999

seq1  GTCCATTCT-GTCATCAG-CCCTAAAGAGGGATAC-TAAGTTTGG-TTAG  1041
      ||||||||| |||||||| |||||||||||||||| ||||||||| ||||
seq2  GTCCATTCTGGTCATCAGTCCCTAAAGAGGGATACTTAAGTTTGGTTTAG  1049

seq1  GT-AGGCAGACAC-AGAT-GAGGGCAGAAGTCCCTGGTC-TTCACCGAT-  1086
      || |||||||||| |||| ||||||||||||||  | || |||  |||| 
seq2  GTAAGGCAGACACAAGATGGAGGGCAGAAGTCCTGGATCTTTCCACGATT  1099

seq1  -CTTTTAGTTACCTGGTGGGCCCAAGTGAGGATTCTAAG-CTAGGGTGCT  1134
        ||||||||  || || ||||||||||||||||||||| ||||||   |
seq2  CTTTTTAGTTTACTTGT-GGCCCAAGTGAGGATTCTAAGCCTAGGGGCAT  1148

seq1  TTGTCG  1140
      ||||||
seq2  TTGTCG  1154

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information