BAC Information

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BAC

Clone NameB6Ng01-248L05
Chromosome2 (Build37)
Map Location 13,133,186 - 13,133,857
singlet/doubletsinglet
Overlap geneRsu1
Upstream geneItga8, 2310047O13Rik, LOC100040837, Pter, C1ql3
Downstream geneCubn, Trdmt1, Vim, St8sia6, Ptpla, Stam, 2010003H20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248L05.bB6Ng01-248L05.g
ACCGA056710GA056711
length6741,062
definitionB6Ng01-248L05.b B6Ng01-248L05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagggccaggaagtgggagtgggtgggttggtgagcagggggag
aggacaaggaatgggggtttttggaagggaaaccaggaagagggataaaa
tttgaaatgtaaataaagaaaatatctaataaaaaataattaatagttgt
ctctagagtgctagatataaattgggttacctgctaatttatttatttat
ttatttatttatttattcattcattcattcattcattcagcaattactaa
ttttcttctttagccccccccccctttcatttcaagggacttgctttccc
aagaaggagaattcacttattcaacaagtatttattaagcccatattttg
tatatttgctagggattataagcagagacatatcatatggagctgttgtt
ctagtggggatacagaaaaaggcaggtgggaagaaagggaaagagaccaa
cagacaacagacaaagacagaaagctagctaggtcggtaaagaggatata
tcctatggtgttaaaaatgaagcctgagtaaagtgctgagaaagggaaga
agtagtctgagaactctcacttattgcacatttaattcaaacctttaaag
atgagaggtgctttcttttttgggttttccagaatatcctgaagaccagc
tgagacacttaaccttgtagacta
gaattcttcacaagatggccatttttactatattaatcctgccaatccat
gagcatgggagatctttccatcttctgagaccttcaatttctttcttcag
agacttcgacgtcttgtcatatagatctttcacttgcttggttagagtca
catcaaggtatgtaatattatctgtgtctattgggaagggtgtaatttcc
ctaatttctttctcagcctgtttatcctttgagtagaggaaggctcctga
tttgtttatccagccacgttgttaaagttgcttatcagctgtaggagttc
tctggtggaatttttggggtcacttaagtacgtgatcatatcatctgcaa
atagtggtattttgacttcttcctttccaatttgtatccttttgacctcc
ttttgttgtctaattgccctagctagaactttaagtactatgctgaatag
atagggagagagtgggcagccttttgtagtcaccaattttagtaggattg
cttcaaatttgtttccattcagttttatgttggctactggtttgctgtat
attgcttttactatgtttaggtatgagccttgaattcctgatcttacaaa
gacttttaacatgaagggatgttgaatttttttcaaatgctttttcagca
tctaatgaaatgatcacgtggttttctttctttgagtttgtttatgtaat
ggattatgttgatggatttctgtatattgaaccattcctgcatccctggg
atgaagcctacttgattgagatggatgataattttgatgtgttcttggat
tcagctggtaagaattttattgagtatttttgcatcaatgttcataaggg
agattggtctgaagttctctttctttctttagtctttgtgtcatttaggt
ataagcgtaaatattggtttataagaatgaaattggggtggtggtacctt
ctggttttctattttttcagacagtttgaagaaatattggtattaatatt
tcctcaccctgttggattgtgttttcctgttaattcttcaagggaatttt
tggtgtttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_13133186_13133857
seq2: B6Ng01-248L05.b_48_721 (reverse)

seq1  TAGTCTACAAGGTTAAGTGTCTCAGCTGGTCTTCAGGATATTCTGG-AAA  49
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TAGTCTACAAGGTTAAGTGTCTCAGCTGGTCTTCAGGATATTCTGGAAAA  50

seq1  CCCAAAAAAGAAAGCACCTCTCATCTTT-AAGGTTTGAATTAAATGTGCA  98
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCCAAAAAAGAAAGCACCTCTCATCTTTAAAGGTTTGAATTAAATGTGCA  100

seq1  ATAAGTGAGAGTTCTCAGACTACTTCTTCCCTTTCTCAGCACTTTACTCA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGAGAGTTCTCAGACTACTTCTTCCCTTTCTCAGCACTTTACTCA  150

seq1  GGCTTCATTTTTAACACCATAGGATATATCCTCTTTACCGACCTAGCTAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCATTTTTAACACCATAGGATATATCCTCTTTACCGACCTAGCTAG  200

seq1  CTTTCTGTCTTTGTCTGTTGTCTGTTGGTCTCTTTCCCTTTCTTCCCACC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTCTTTGTCTGTTGTCTGTTGGTCTCTTTCCCTTTCTTCCCACC  250

seq1  TGCCTTTTTCTGTATCCCCACTAGAACAACAGCTCCATATGATATGTCTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTTTCTGTATCCCCACTAGAACAACAGCTCCATATGATATGTCTC  300

seq1  TGCTTATAATCCCTAGCAAATATACAAAATATGGGCTTAATAAATACTTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATAATCCCTAGCAAATATACAAAATATGGGCTTAATAAATACTTG  350

seq1  TTGAATAAGTGAATTCTCCTTCTTGGGAAAGCAAGTCCCTTGAAATGAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAAGTGAATTCTCCTTCTTGGGAAAGCAAGTCCCTTGAAATGAAA  400

seq1  GGGGGGGGGGGCTAAAGAAGAAAATTAGTAATTGCTGAATGAATGAATGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGGGCTAAAGAAGAAAATTAGTAATTGCTGAATGAATGAATGA  450

seq1  ATGAATGAATAAATAAATAAATAAATAAATAAATAAATTAGCAGGTAACC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGAATAAATAAATAAATAAATAAATAAATAAATTAGCAGGTAACC  500

seq1  CAATTTATATCTAGCACTCTAGAGACAACTATTAATTATTTTTTATTAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTATATCTAGCACTCTAGAGACAACTATTAATTATTTTTTATTAGA  550

seq1  TATTTTCTTTATTTACATTTCAAATTTTATCCCTCTTCCTGGTTTCCCTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTTTATTTACATTTCAAATTTTATCCCTCTTCCTGGTTTCCCTT  600

seq1  CCAAAAACCCCCATTCCTTGTCCTCTCCCCCTGCTCACCAACCCACCCAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAACCCCCATTCCTTGTCCTCTCCCCCTGCTCACCAACCCACCCAC  650

seq1  TCCCACTTCCTGGCCCTGGAATTC  672
      ||||||||||||||||||||||||
seq2  TCCCACTTCCTGGCCCTGGAATTC  674