BAC Information

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BAC

Clone NameB6Ng01-249C02
Chromosome2 (Build37)
Map Location 136,231,693 - 136,232,823
singlet/doubletsinglet
Overlap genenone
Upstream genePlcb1, LOC100043487, LOC100043786, LOC100043788, Plcb4, 6330527O06Rik, Pak7, LOC668910, LOC100043492
Downstream geneBC034902, Ankrd5, Snap25, LOC668911, Mkks, 2210009G21Rik, Jag1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249C02.bB6Ng01-249C02.g
ACCGA057028GA057029
length1,2441,125
definitionB6Ng01-249C02.b B6Ng01-249C02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gggaattcaagaaggaggttttaaaaatccagagctgaatgaaaaataaa
aatcagacacacaaaaatctaatgaataaagtctctgttgacagaggttt
tagctataagttcctacattaaaaaaatcagagagataataaatacatta
attaatgagacaacacagaagagtggaaaataagaacaacccaaccacca
aacaagaagaaaagatgaggacataaattattgaagtagaaatgaaaaat
ttagaaagattcaatgaatcagaaagttctggaaagttttttgaaaaggt
agacaagattgacaaacccttaaccaaattaagcaaaaaagaaaggagac
caaagataataagttaatgaaaagttcacattattatggatactaaggaa
gttcaaagtcattaggacttatctttaaaatttatttatttttcactaaa
ttagaaaatctaaaagaaatgaatgaatttctagagacatgtaacctatg
gatatgaaaagataaggtaaatgattcaaacaaatctgaaacaatggaat
tgacagtgataaaaattctcccaatgagaaaaagttaaggttagctgggc
gaagtagtccacacagttagttccggtactctggaggcagatgcaggcag
atctctgtgaattcaaggctacctcgaaataagaagttttgagttacatg
gcagccagagctatgaagagagatcctatattgggtatttgaattcaaca
tatagttttactagactttcaaaattctatgagaataacactattttcct
ctcaaatagcctgtaaaatataggattaatgaatcctttcatgcttttct
ttatgaagcaagtaccaaatcatttaaaacataacaaaaaagaaaagcat
acattatctacttgttgaacacagacacacaatattttgggtaaaaatat
ttgaaattcaagtttaataatgtgccaaaaaagatcattccaccgtgatc
aagttggacttcattcttaaagatgccagaataaagctcactagaaaaaa
taactttataggtgcaattcatcaacatgaatttacagggagacctattt
acatcattcattttgggtagaggcagtaaaaagcttttgaaagaattccc
aaattcttttcaatttaaactccttacgaacctagccctgtgattgtaac
cgctctagtgaaattaagtacttactgaactacaacagctactg
gaattcatgtaagtgttcttctatgcaaatatttctgtgatccatagaaa
gcaaaacatctcaaaggctcttacaaagaagaatttaaaggaaacccact
ccagcagatgtgtaaaaacacaacaaagaaacataaagaattggacacag
ccaccatcaatgacccatcatcaaatgaccctcattccctataagggaat
taaaactatagatatggttgaaatttctaagaattaattataatatagga
attcaaacagattcacaaattaagaagattcattcattacttgatatgat
actctccaaagtgaatataacagtaaattggaagcataagatcaaaatgt
tgagagaaaattaatcaaggagattaaaacattgaaaaaaacagaaatac
ttgaaagagatcatcaatcaaatcaaaaccacaccagataacattaacag
ttaggaccatgcagaagattgaatttcaggaatagagaacataattgaga
caataatacaaattatatatatacataaatatatataaagtaattaagga
ccatgaatgatatttccaaaaggtctggggtgcattaaataggccaaacc
tgaaagttcataggagaaagagcacaattaaaagtaactgtaatagaggg
gctacttaatgatattatttcagaaaacttctcaaatttacagaaataag
tagccatatgaacacagaactccaaatagacatgaccagaaaagaactat
cacatgttacagtcaatatgtcaaaattataaaataatatcctaaaaaca
atgtgtgtatgtgcatgcataatcaaatcatatataaagatataaatatc
agaaactgcctaatacttttcatcagtaactataaactacagaacatgga
atgaaatattttaagctctgaaagtaaataactctgaggcaaaaatgcta
tatcccatacacaaagctgtcttcaaattgatggagaaaataatatttta
tataacaaaaaacatacagcatgaaagaaagttttttattggaaaaaagg
agggaaaatattttaatgatcttttaaatattatttacattactttattt
tatggtgtatgaccattctcacctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_136231693_136232823
seq2: B6Ng01-249C02.g_66_1190 (reverse)

seq1  CAGGTGAG-ATGTTCATACA-CATAAAATAAAGTAAATGTAAATAAATTA  48
      |||||||| ||| ||||||| ||||||||||||| |||||||||||  ||
seq2  CAGGTGAGAATGGTCATACACCATAAAATAAAGT-AATGTAAATAA--TA  47

seq1  TTTTAAAAGATCATTTAAAATATTTT-CCTTCTTTTTTCAATTAAAAAAC  97
       |||||||||||| |||||||||||| ||| |||||||| | ||||||||
seq2  -TTTAAAAGATCA-TTAAAATATTTTCCCTCCTTTTTTCCAATAAAAAAC  95

seq1  TTTCTTTCATGCTGTATTGTTTTTTGTTTATATTAAAATATTA-TTTCTC  146
      |||||||||||||||| ||||||||| ||||| |||||||||| ||||||
seq2  TTTCTTTCATGCTGTA-TGTTTTTTG-TTATA-TAAAATATTATTTTCTC  142

seq1  CATCAATTTTGAAGACAGCTTTGTGTATGGGATATAGCATTTTTGCCTCA  196
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAA-TTTGAAGACAGCTTTGTGTATGGGATATAGCATTTTTGCCTCA  191

seq1  GAGTTATTTACTTTCAGAGCTTAAAATATTTCATTCCATGTTCTGTAGTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTATTTACTTTCAGAGCTTAAAATATTTCATTCCATGTTCTGTAGTT  241

seq1  TATAGTTACTGATGAAAAGTATTAGGCAGTTTCTGATATTTATATCTTTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTACTGATGAAAAGTATTAGGCAGTTTCTGATATTTATATCTTTA  291

seq1  TATATGATTTGATTATGCATGCACATACACACATTGTTTTTAGGATATTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATTTGATTATGCATGCACATACACACATTGTTTTTAGGATATTA  341

seq1  TTTTATAATTTTGACATATTGACTGTAACATGTGATAGTTTCTTTTCTGG  396
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTTATAATTTTGACATATTGACTGTAACATGTGATAG-TTCTTTTCTGG  390

seq1  TCATGTCTATTTGGAGTTCTGTGTTCATATGGCTACTTATTTCTGTAAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCTATTTGGAGTTCTGTGTTCATATGGCTACTTATTTCTGTAAAT  440

seq1  TTGAGAAGTTTTCTGAAATAATATCATTAAGTAGCCCCTCTATTACAGTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAGTTTTCTGAAATAATATCATTAAGTAGCCCCTCTATTACAGTT  490

seq1  ACTTTTAATTGTGCTCTTTCTCCTATGAACTTTCAGGTTTGGCCTATTTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAATTGTGCTCTTTCTCCTATGAACTTTCAGGTTTGGCCTATTTA  540

seq1  ATGCACCCCAGACCTTTTGGAAATATCATTCATGGTCCTTAATTACTTTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACCCCAGACCTTTTGGAAATATCATTCATGGTCCTTAATTACTTTA  590

seq1  TATATATTTATGTATATATATAATTTGTATTATTGTCTCAATTATGTTCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTTATGTATATATATAATTTGTATTATTGTCTCAATTATGTTCT  640

seq1  CTATTCCTGAAATTCAATCTTCTGCATGGTCCTAACTGTTAATGTTATCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCCTGAAATTCAATCTTCTGCATGGTCCTAACTGTTAATGTTATCT  690

seq1  GGTGTGGTTTTGATTTGATTGATGATCTCTTTCAAGTATTTCTGTTTTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGTTTTGATTTGATTGATGATCTCTTTCAAGTATTTCTGTTTTTT  740

seq1  TCAATGTTTTAATCTCCTTGATTAATTTTCTCTCAACATTTTGATCTTAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTTTTAATCTCCTTGATTAATTTTCTCTCAACATTTTGATCTTAT  790

seq1  GCTTCCAATTTACTGTTATATTCACTTTGGAGAGTATCATATCAAGTAAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCAATTTACTGTTATATTCACTTTGGAGAGTATCATATCAAGTAAT  840

seq1  GAATGAATCTTCTTAATTTGTGAATCTGTTTGAATTCCTATATTATAATT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATCTTCTTAATTTGTGAATCTGTTTGAATTCCTATATTATAATT  890

seq1  AATTCTTAGAAATTTCAACCATATCTATAGTTTTAATTCCCTTATAGGGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTAGAAATTTCAACCATATCTATAGTTTTAATTCCCTTATAGGGA  940

seq1  ATGAGGGTCATTTGATGATGGGTCATTGATGGTGGCTGTGTCCAATTCTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGGTCATTTGATGATGGGTCATTGATGGTGGCTGTGTCCAATTCTT  990

seq1  TATGTTTCTTTGTTGTGTTTTTACACATCTGCTGGAGTGGGTTTCCTTTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTCTTTGTTGTGTTTTTACACATCTGCTGGAGTGGGTTTCCTTTA  1040

seq1  AATTCTTCTTTGTAAGAGCCTTTGAGATGTTTTGCTTTCTATGGATCACA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTCTTTGTAAGAGCCTTTGAGATGTTTTGCTTTCTATGGATCACA  1090

seq1  GAAATATTTGCATAGAAGAACACTTACATGAATTC  1131
      |||||||||||||||||||||||||||||||||||
seq2  GAAATATTTGCATAGAAGAACACTTACATGAATTC  1125