BAC Information

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BAC

Clone NameB6Ng01-249D05
Chromosome2 (Build37)
Map Location 15,212,644 - 15,213,816
singlet/doubletsinglet
Overlap genenone
Upstream geneMrc1, Slc39a12, Cacnb2, LOC100041164, LOC625335, LOC625342, LOC100041220, Nsun6, Arl5b, LOC633061
Downstream geneLOC667329, LOC227588, LOC625457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249D05.bB6Ng01-249D05.g
ACCGA057082GA057083
length1,2151,164
definitionB6Ng01-249D05.b B6Ng01-249D05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagaggcagtgcgcagactcattcattcccagagaggaacaaa
ggaaaatacaacaggcatttccggtctttgaaggagccgagggtgggcgt
gtccacgctccggtagaatacttacaaattaaagagcttgccgagtcggt
ccgtaaatacggaaccaatgctaattttaccttggtgcagttagacaggc
tcgccggcatggcactaactcctgctgactggcaaacggttgtaaaagcc
gctctccctagtatgggcaaatatatggaatggagagctctttggcatga
aactgcacaagcgcaggcccgagcaaacgcagctgctttgactccagagc
agagagattggacttttgacttgttaacgggtcagggagcttattctgct
gatcagacaaactaccattggggagcttatgcccagatttcttccacggc
tattagggcctggaaggcgctctctcgagcaggtgaaaccactgggcagt
taacaaagataatccagggacctcaggaatccttctcagattttgtggcc
agaatgacagaggcagcagagcgtatttttggagagtcagagcaagctgc
gcctctgatagaacagctaatctatgagcaagccacaaaggagtgccgag
cggccatagccccaagaaagaacaaaggcttacaagactggctcaggtct
gtcgagagcttgggggacctctcaccaatgcaggcttagcggccgccatc
cttcaatctcagaaccgctccgtgagcagaaatgatcagaggacatgttt
atgcgaaagcctggcattttagaaagatgcagagctcagaataacaggag
ggactcctcactctgctctacgtggcagggtatcatagagctgacaggtc
gcctctgtgagaatataaagggcagatcctcccactgaatgtcattcgag
ctttagtcaaaacgtcatcggaccttcggtctcagctctagaataggaac
ccgggtgtctactag

gaattcatgagcccaatgagctggaaggggaataccatcacttgaggtta
ttctttgatctctgtcttggtgtgaatgtatctcttcctagctacatgca
cttacatacacagatttttaaaaaagatgttcacgtttagtttgggaaac
taaaatgaaggacactcaaggtagactctagttccattgaagccaaacat
atcatttgaattttctaaaccatgcagcagtattttgaacaataggaagc
acagtgacttacctgaagtgtgtagcctagttctatttacaggaatgggt
cacggctggattgctttagcattgaaatagagtttactgaaactcccaaa
gcaaattgagcatgtgaaagtcttctatggtgtctgccttagtgttaggc
ttcaaacataaactgtaggatatctgaactcacaggctccctaattttta
aaataacgaatttagaaataggagaagtgaatggattggtacagacctaa
tgctgtttaaagtgaaaaaggtaaatatttgctttacaataagaaataca
taaagaagtgccagaaactagactcattgctaaaataagtggaataatgc
agaaaaatgacattcactttatcattgtatattattacatacattgtaag
ttaagaaaaaatgtaattgtcatactgacgaggtcaactcagaaacttta
gaaaattccactggtcccctcctttcctggaagcgaaaggtaataagaac
atagtcacccctcccctctggaagggaggggctaattacattcctcagac
tacagtgaggatagactgaccaccagagctcatagatacattctgagacc
attggccacccacctcattccctatagaccaatcagtttaaaagtcacac
tgtttctgccaatcatattgtgcctaatggtggtggcccgaagaactgta
taagggctcgctggatcggctgtacatagttgttctttccccaagtgcag
catactggactaaataaaattcctcttacttgttgtatcttttccagtct
catgttgttcttctcaaggtctcttggtaagttagctccccagaagtctt
acaaacccaaccttatacttagtctgatttataaaaacaaacaaatcaat
tgatgaatctagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_15212644_15213816
seq2: B6Ng01-249D05.g_67_1230

seq1  GAATTCATGAGCCCAATGAGCTGGAAGGGGAATACCATCACTTGAGGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAGCCCAATGAGCTGGAAGGGGAATACCATCACTTGAGGTTA  50

seq1  TTCTTTGATCTCTGTCTTGGTGTGAATGTATCTCTTCCTAGCTACATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGATCTCTGTCTTGGTGTGAATGTATCTCTTCCTAGCTACATGCA  100

seq1  CTTACATACACAGATTTTTAAAAAAGATGTTCACGTTTAGTTTGGGAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATACACAGATTTTTAAAAAAGATGTTCACGTTTAGTTTGGGAAAC  150

seq1  TAAAATGAAGGACACTCAAGGTAGACTCTAGTTCCATTGAAGCCAAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAAGGACACTCAAGGTAGACTCTAGTTCCATTGAAGCCAAACAT  200

seq1  ATCATTTGAATTTTCTAAACCATGCAGCAGTATTTTGAACAATAGGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTGAATTTTCTAAACCATGCAGCAGTATTTTGAACAATAGGAAGC  250

seq1  ACAGTGACTTACCTGAAGTGTGTAGCCTAGTTCTATTTACAGGAATGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGACTTACCTGAAGTGTGTAGCCTAGTTCTATTTACAGGAATGGGT  300

seq1  CACGGCTGGATTGCTTTAGCATTGAAATAGAGTTTACTGAAACTCCCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCTGGATTGCTTTAGCATTGAAATAGAGTTTACTGAAACTCCCAAA  350

seq1  GCAAATTGAGCATGTGAAAGTCTTCTATGGTGTCTGCCTTAGTGTTAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTGAGCATGTGAAAGTCTTCTATGGTGTCTGCCTTAGTGTTAGGC  400

seq1  TTCAAACATAAACTGTAGGATATCTGAACTCACAGGCTCCCTAATTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACATAAACTGTAGGATATCTGAACTCACAGGCTCCCTAATTTTTA  450

seq1  AAATAACGAATTTAGAAATAGGAGAAGTGAATGGATTGGTACAGACCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACGAATTTAGAAATAGGAGAAGTGAATGGATTGGTACAGACCTAA  500

seq1  TGCTGTTTAAAGTGAAAAAGGTAAATATTTGCTTTACAATAAGAAATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTTAAAGTGAAAAAGGTAAATATTTGCTTTACAATAAGAAATACA  550

seq1  TAAAGAAGTGCCAGAAACTAGACTCATTGCTAAAATAAGTGGAATAATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGTGCCAGAAACTAGACTCATTGCTAAAATAAGTGGAATAATGC  600

seq1  AGAAAAATGACATTCACTTTATCATTGTATATTATTACATACATTGTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATGACATTCACTTTATCATTGTATATTATTACATACATTGTAAG  650

seq1  TTAAGAAAAAATGTAATTGTCATACTGACGAGGTCAACTCAGAAACTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAAAAATGTAATTGTCATACTGACGAGGTCAACTCAGAAACTTTA  700

seq1  GAAAATTCCACTGGTCCCCTCCTTTCCTGGAAGCGAAAGGTAATAAGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTCCACTGGTCCCCTCCTTTCCTGGAAGCGAAAGGTAATAAGAAC  750

seq1  ATAGTCACCCCTCCCCTCTGGAAGGGAGGGGCTAATTACATTCCTCAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCACCCCTCCCCTCTGGAAGGGAGGGGCTAATTACATTCCTCAGAC  800

seq1  TACAGTGAGGATAGACTGACCACCAGAGCTCATAGATACATTCTGAGACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGAGGATAGACTGACCACCAGAGCTCATAGATACATTCTGAGACC  850

seq1  ATTGGCCACCCACCTCATTCCCTATAGACCAATCAGTTTAAAAGTCACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCCACCCACCTCATTCCCTATAGACCAATCAGTTTAAAAGTCACAC  900

seq1  TG-TTCTGCCAATCATATTGTGCCTAATGGTGGTGGCCCGAAGAACTGTA  949
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGCCAATCATATTGTGCCTAATGGTGGTGGCCCGAAGAACTGTA  950

seq1  TAAGGGCTCGCTGGATCGGCTGTACATAGTTGTTCTTTCCCCAAGTGCAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGCTCGCTGGATCGGCTGTACATAGTTGTTCTTTCCCCAAGTGCAG  1000

seq1  CATACTGGACTAAATAAAATTCCTCTTACTTG-TGTATCTTTTCCAGTCT  1048
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CATACTGGACTAAATAAAATTCCTCTTACTTGTTGTATCTTTTCCAGTCT  1050

seq1  CCATGTTGTTC-TCTCAGGGGTCTC-TGGTAAGTTAAGGCTCCCCAG-AG  1095
       |||||||||| |||||  |||||| ||||||||||  ||||||||| ||
seq2  -CATGTTGTTCTTCTCA-AGGTCTCTTGGTAAGTTA--GCTCCCCAGAAG  1096

seq1  TCTTAC-AACACACCCTATTACTTAGTCTTGAAATAAAATAAAAACCAAA  1144
      |||||| ||| || |||  ||||||||| |||  |   ||||||||   |
seq2  TCTTACAAACCCAACCTTATACTTAGTC-TGATTT---ATAAAAAC---A  1139

seq1  AACAAAAACCAAATGATGGGAATCTAGTT  1173
      |||  ||| ||| ||||  ||||||||||
seq2  AAC--AAATCAATTGAT--GAATCTAGTT  1164


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