BAC Information

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BAC

Clone NameB6Ng01-249E19
Chromosome2 (Build37)
Map Location 150,040,934 - 150,206,867
singlet/doubletdoublet
Overlap geneEG245174, 3300002I08Rik
Upstream geneLOC433483, LOC383754, LOC100043593, LOC241715, Cst10, EG667048, C530025M09Rik, OTTMUSG00000015750, LOC279056, Zfp120
Downstream geneLOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605, Pygb, Abhd12, Gins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390, 4930442J19Rik, LOC100043839
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249E19.bB6Ng01-249E19.g
ACCGA057157GA057158
length1,101612
definitionB6Ng01-249E19.b B6Ng01-249E19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,205,773 - 150,206,867)(150,040,934 - 150,041,545)
sequence
gaattccagtcagcaatgtccaaattcagtcaaaccacagattgtgaagt
ccagcataccatcaactgttaagtcctacagatcaacaccaaacagctgt
ctgcacagaataacaccaaccagccctaggcactgcactgtatggacagt
tgtctgtcattcctcaaatagactctggtgagatctgagcattagtgacc
actcagggctggcacaacccacttttgccttttctcactttttggtacca
tggggcggtgtctatctcttaacttttgtttcactgtgatcaaggccctg
tcaagaatcaccttaagagaggaatagcattatttagtctcatgctatga
ggggcttgctggagggttagtaggcattttggccagacttggattttgcc
actaaaatataactgttgcagctctgaagggaaaggtatactgtcagcta
ggagccaagaaataccaactacaaagtcacaacatgcaataaacctcaca
caagagatttattgggagacagaaacacaggagggtggctgcccctgctc
aggtgataaacagcagtgaagtaagcagacacaagacccttatatagggt
cttgacgggcagagtttccatggtggagatttccagagtaatgaatgatg
gtatttcagtcctgagattggagagctcagaggttggtgggttttctcat
tgaggtatgatggagtttcatgcttctggatgagtggattactatggaaa
tctcaccgttcttcagttcatggattgatgaaattaatactttttaaaat
tcttgtagtgttggccctggatacactcatgccttggcgctgggaacaag
tactaccagctgttagaaaataactgttggaagaggagaacttcaatgga
tccaagtcatagtagccactccctgtgtaggtaatgtaggcagtccaagt
ccacatcctggattgaagaaagagatgctctgtaccccatttttaatagg
cctattttgatttttctggagttcagcttctggagtcttttgtatatttg
gaattagtcccccattggatttagattgttaaaatctctttcccatcgtg
g
gaattcttttgcagtgttagaaaatgcactttctgtcttctaagtttcaa
gggactggggtcacaggtgttgattcatagaataatcaaaagggatcctg
gaataaatatccaaattcatacatgatttttaaaaaaaacctgggttttc
agtctgcatgacaagagctagcaggaaatgatagcagttcatttttagaa
tttttctgtagtgacagtagagtgagatatctgaagatcactggagagtg
aacacagctcatcaagaattttttctaaagggatttctgaggtcagaaac
ccaaagaattacttagacagctgacacagctctttaaaaatggtttctag
cagctatccagcaaaaacagctcttttagaattattattattattattac
tattattattattattgttactattattactactactactatacttgctt
tctgattttaataaccccaagaattacttttggaagttttctgtttgact
aggccagttggtccaagaattcttatagaatttttactagcagagagagc
tgtcttgagcagaaaaatacctgtctaaatcagagagtattaagaatata
aagaaaaagcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_150205773_150206867
seq2: B6Ng01-249E19.b_42_1136 (reverse)

seq1  TGGGAAAGGATTTTTACCAATCCTAAATCCAATGGGGGACTAATATCAAA  50
      ||||||||   ||||| |||| ||||||||||||||||||||||  ||||
seq2  TGGGAAAGAGATTTTAACAAT-CTAAATCCAATGGGGGACTAATTCCAAA  49

seq1  TATACAAAGAACTCAAGAAGCTGAACTCCAGAAAAATC-AAATAGCCCTA  99
      ||||||||  |||| ||||||||||||||||||||||| |||||| ||||
seq2  TATACAAAAGACTCCAGAAGCTGAACTCCAGAAAAATCAAAATAGGCCTA  99

seq1  TTAAAAATGGGGTACAGAGCATCTTCTTTC-TCAATCCAGGATGTGGACT  148
      ||||||||||||||||||||||| |||||| |||||||||||||||||||
seq2  TTAAAAATGGGGTACAGAGCATC-TCTTTCTTCAATCCAGGATGTGGACT  148

seq1  TGGACTGCCTACATTACCTACACAGGGAGTGGCTACTATGACTTGGATCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGCCTACATTACCTACACAGGGAGTGGCTACTATGACTTGGATCC  198

seq1  ATTGAAGTTCTCCTCTTCCAACAGTTATTTTCTAACAGCTGGTAGTACTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGTTCTCCTCTTCCAACAGTTATTTTCTAACAGCTGGTAGTACTT  248

seq1  GTTCCCAGCGCCAAGGCATGAGTGTATCCAGGGCCAACACTACAAGAATT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAGCGCCAAGGCATGAGTGTATCCAGGGCCAACACTACAAGAATT  298

seq1  TTAAAAAGTATTAATTTCATCAATCCATGAACTGAAGAACGGTGAGATTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGTATTAATTTCATCAATCCATGAACTGAAGAACGGTGAGATTT  348

seq1  CCATAGTAATCCACTCATCCAGAAGCATGAAACTCCATCATACCTCAATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTAATCCACTCATCCAGAAGCATGAAACTCCATCATACCTCAATG  398

seq1  AGAAAACCCACCAACCTCTGAGCTCTCCAATCTCAGGACTGAAATACCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACCCACCAACCTCTGAGCTCTCCAATCTCAGGACTGAAATACCAT  448

seq1  CATTCATTACTCTGGAAATCTCCACCATGGAAACTCTGCCCGTCAAGACC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTACTCTGGAAATCTCCACCATGGAAACTCTGCCCGTCAAGACC  498

seq1  CTATATAAGGGTCTTGTGTCTGCTTACTTCACTGCTGTTTATCACCTGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAAGGGTCTTGTGTCTGCTTACTTCACTGCTGTTTATCACCTGAG  548

seq1  CAGGGGCAGCCACCCTCCTGTGTTTCTGTCTCCCAATAAATCTCTTGTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCAGCCACCCTCCTGTGTTTCTGTCTCCCAATAAATCTCTTGTGT  598

seq1  GAGGTTTATTGCATGTTGTGACTTTGTAGTTGGTATTTCTTGGCTCCTAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTATTGCATGTTGTGACTTTGTAGTTGGTATTTCTTGGCTCCTAG  648

seq1  CTGACAGTATACCTTTCCCTTCAGAGCTGCAACAGTTATATTTTAGTGGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGTATACCTTTCCCTTCAGAGCTGCAACAGTTATATTTTAGTGGC  698

seq1  AAAATCCAAGTCTGGCCAAAATGCCTACTAACCCTCCAGCAAGCCCCTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCAAGTCTGGCCAAAATGCCTACTAACCCTCCAGCAAGCCCCTCA  748

seq1  TAGCATGAGACTAAATAATGCTATTCCTCTCTTAAGGTGATTCTTGACAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGAGACTAAATAATGCTATTCCTCTCTTAAGGTGATTCTTGACAG  798

seq1  GGCCTTGATCACAGTGAAACAAAAGTTAAGAGATAGACACCGCCCCATGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGATCACAGTGAAACAAAAGTTAAGAGATAGACACCGCCCCATGG  848

seq1  TACCAAAAAGTGAGAAAAGGCAAAAGTGGGTTGTGCCAGCCCTGAGTGGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAAAAGTGAGAAAAGGCAAAAGTGGGTTGTGCCAGCCCTGAGTGGT  898

seq1  CACTAATGCTCAGATCTCACCAGAGTCTATTTGAGGAATGACAGACAACT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATGCTCAGATCTCACCAGAGTCTATTTGAGGAATGACAGACAACT  948

seq1  GTCCATACAGTGCAGTGCCTAGGGCTGGTTGGTGTTATTCTGTGCAGACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATACAGTGCAGTGCCTAGGGCTGGTTGGTGTTATTCTGTGCAGACA  998

seq1  GCTGTTTGGTGTTGATCTGTAGGACTTAACAGTTGATGGTATGCTGGACT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTGGTGTTGATCTGTAGGACTTAACAGTTGATGGTATGCTGGACT  1048

seq1  TCACAATCTGTGGTTTGACTGAATTTGGACATTGCTGACTGGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATCTGTGGTTTGACTGAATTTGGACATTGCTGACTGGAATTC  1095

seq1: chr2_150040934_150041545
seq2: B6Ng01-249E19.g_67_678

seq1  GAATTCTTTTGCAGTGTTAGAAAATGCACTTTCTGTCTTCTAAGTTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGCAGTGTTAGAAAATGCACTTTCTGTCTTCTAAGTTTCAA  50

seq1  GGGACTGGGGTCACAGGTGTTGATTCATAGAATAATCAAAAGGGATCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGGGGTCACAGGTGTTGATTCATAGAATAATCAAAAGGGATCCTG  100

seq1  GAATAAATATCCAAATTCATACATGATTTTTAAAAAAAACCTGGGTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATATCCAAATTCATACATGATTTTTAAAAAAAACCTGGGTTTTC  150

seq1  AGTCTGCATGACAAGAGCTAGCAGGAAATGATAGCAGTTCATTTTTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCATGACAAGAGCTAGCAGGAAATGATAGCAGTTCATTTTTAGAA  200

seq1  TTTTTCTGTAGTGACAGTAGAGTGAGATATCTGAAGATCACTGGAGAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGTAGTGACAGTAGAGTGAGATATCTGAAGATCACTGGAGAGTG  250

seq1  AACACAGCTCATCAAGAATTTTTTCTAAAGGGATTTCTGAGGTCAGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGCTCATCAAGAATTTTTTCTAAAGGGATTTCTGAGGTCAGAAAC  300

seq1  CCAAAGAATTACTTAGACAGCTGACACAGCTCTTTAAAAATGGTTTCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAATTACTTAGACAGCTGACACAGCTCTTTAAAAATGGTTTCTAG  350

seq1  CAGCTATCCAGCAAAAACAGCTCTTTTAGAATTATTATTATTATTATTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTATCCAGCAAAAACAGCTCTTTTAGAATTATTATTATTATTATTAC  400

seq1  TATTATTATTATTATTGTTACTATTATTACTACTACTACTATACTTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTATTGTTACTATTATTACTACTACTACTATACTTGCTT  450

seq1  TCTGATTTTAATAACCCCAAGAATTACTTTTGGAAGTTTTCTGTTTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTTTAATAACCCCAAGAATTACTTTTGGAAGTTTTCTGTTTGACT  500

seq1  AGGCCAGTTGGTCCAAGAATTCTTATAGAATTTTTACTAGCAGAGAGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGTTGGTCCAAGAATTCTTATAGAATTTTTACTAGCAGAGAGAGC  550

seq1  TGTCTTGAGCAGAAAAATACCTGTCTAAACCAGAGAGTATTAAGAATAGA  600
      ||||||||||||||||||||||||||||| |||||||||||||||||| |
seq2  TGTCTTGAGCAGAAAAATACCTGTCTAAATCAGAGAGTATTAAGAATATA  600

seq1  AAGAAAAAGCTA  612
      ||||||||||||
seq2  AAGAAAAAGCTA  612