BAC Information

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BAC

Clone NameB6Ng01-250G06
Chromosome2 (Build37)
Map Location 68,564,490 - 68,564,715
singlet/doubletsinglet
Overlap gene4932414N04Rik
Upstream geneLOC227995, B3galt1, Stk39, LOC100039683, Gm1323, 4933409G03Rik
Downstream geneLOC667443, Lass6, Nostrin, Spc25, G6pc2, Abcb11, Dhrs9, Lrp2, Bbs5, Kbtbd10, Fastkd1, Ppig
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250G06.bB6Ng01-250G06.g
ACCGA057951GA057952
length1,0031,160
definitionB6Ng01-250G06.b B6Ng01-250G06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagcaaggtcagggcggtttgtggtttttctcagaattcagtgt
ggggcaggataggggaatttctctgggaactgcttgtgagcagcgatagg
aatcttgttatggttatggttatttttctgagaacagtacattttgtttt
ggcagctgtagactctgtcattttgaccgctatgtttctgaaagtccctt
cagaggggaaggggctaggtggtcttgaacttatttttgattctacagtt
caacaactactcctgagcatgcggcttgacctggagcatgtggttgatat
tcctcgtaatactctatttgagaaacttcacttcctctttaccagcaggt
atcaacggcaaatagccttttgtttgggggtaggactttgtgttcccctc
ccttctcactgctagcactggaactgatttggcttttgcacagggtcatt
gtctctgtaagtccatatatgtatcagtcctgttgtgtctggaaaacact
gtttccttggcgtcatataccacctatggcccttacaatctttccacatt
ctcttctgctaagacccttgagccttgtgagaaaaggtttgataaatacc
tcccatttaggactgaatgccctaaaattgctgactctgcatattgtcta
attggggtctctatattggtttccatctactgcaagaggaagtatctttt
atatgggtcaaacaagacaaggatatatgggcatagtaatacgtcattat
agtagaagattttctcttagggcccatgatctatctagtctcagttcatg
acccttcatcagtgtgcattatagattccatcttgtggcatgggccttaa
atccaatcaaaaaatgccactattacaccaagacatcttgcaggcaagtc
actataatagtcacagttgtgtagctcagtgacattggtgattattcttt
ccctctagaagcatacagagtactgtcaaggaccctggatgctagccatt
aga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tcaacctcataccagtcagaatggctaagatcaaaaattccggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
ggaaattggacatagtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaatcc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccgtagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagagactgccatatcccggggatccaccccataat
cagcatccaaacgctgacaccatttcatacactagcaagattttatcgaa
agggacccagatgtagctgtctcttgtgagactatgctggggcctagcaa
acacagaagtggatgctcacagtcagctaatggatggatcacaggctccc
aatggaggagctagagaagtagccagagctaaagggatctgcaccctata
gccgacacatatgactacagtacccggagctctcgattctagctgcatat
gtatcaaagaatggcctagtcggccatcactggaaggaaggcccattgac
acgcaactttatattgccagtacaggacgccagggccaaatatgtaaatg
tttgctagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_68564490_68564715
seq2: B6Ng01-250G06.b_43_289 (reverse)

seq1  TGTAGAATCCAAAATAAGTTCAAGACCACCTAGCTCCTTCCCCTCTGAAG  50
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  TGTAGAATCAAAAATAAGTTCAAGACCACCTAGCCCCTTCCCCTCTGAAG  50

seq1  GGACTTTCAGAAACATAGCAGTCAAAATGACTGAGTCTATAGCTGCCAAA  100
      ||||||||||||||||||| ||||||||||| ||||||| ||||||||||
seq2  GGACTTTCAGAAACATAGCGGTCAAAATGACAGAGTCTACAGCTGCCAAA  100

seq1  CCAAAATGAACTATTCTCAGAAAA------ATAACCATAACAAGATT---  141
       ||||||| ||| |||||||||||      |||||||||||||||||   
seq2  ACAAAATGTACTGTTCTCAGAAAAATAACCATAACCATAACAAGATTCCT  150

seq1  -------------AGCAGTTCCCAGAGAAATACCCCCTACCCTGCCTCAC  178
                   ||||||||||||||||||  |||||| |||||| |||
seq2  ATCGCTGCTCACAAGCAGTTCCCAGAGAAAT-TCCCCTATCCTGCCCCAC  199

seq1  ACTAAATTCTGAGAAAAACCACAAACCGCCCTGACCTTGCTAGAATTC  226
      ||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATTCTGAGAAAAACCACAAACCGCCCTGACCTTGCTAGAATTC  247