BAC Information

Click to search

BAC

Clone NameB6Ng01-250J08
Chromosome2 (Build37)
Map Location 89,255,150 - 89,256,041
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238
Downstream geneOlfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250J08.bB6Ng01-250J08.g
ACCGA058088GA058089
length923976
definitionB6Ng01-250J08.b B6Ng01-250J08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaaattatatagtagtgaaagtaagtcaaaacactgagactc
ttaggagagtcattatgtgcaatgtgcagaggcagaaatttagtggaact
gctgagttaagcgccatcgtgaatctttctggccactgcctggcagtttt
gcccatgtcattaatcattagagcttcacaggaaaatgcatgtagctgac
ctcagagttctaagctctctgaagtataataaagtcaaaagttaaagttt
aaataatgacaagatcgcaattattattttgaccacaggcctgggaatag
gggaagcttgaaattttggggagcaactgtaaatcttaattctttgtgtg
atgtggtcattcttttgaatttgacttggtaatgattatagtcatcaatg
aaagaatggataatgaaattgtcataaatgtacacaatgtactcagttgt
taaaatggaattatgaaaacttcattgaaatgaatgaatctagagaaata
atcatcctgggtcggtgtcacaaagactccctaaaagtattgtatgtttt
gttacatatgtctgcaagatcttctaaggaaagagaaatagaatatacgg
ttatggagaaacagggacaggaaaggagctaaagggttaaatagggatgg
aatgattgagagatgttagggagggacaactaacactaaggaccatttga
atggttgcatgaaaacctactaccttagaagcttctaaaaatatatacat
gatgtgaaatatataaaaagaaccactctaagaataagggaggtactgcc
ctaactaaatatctttcttccttaattaaaatctccactgccagatatgg
gtagtcactggtcaaagcagttccatgaaaatccccaaacaattcaggtt
attgccaaagcctattgtcttgc
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
cttaaaccacccttttatcctgtgtttctatatattccttttccccactt
ttcttccacttcttcccctaacactaaataaaagacaaagagggatagag
tacaaaaaaagaaagagagaaatccttgaatctaacctcctcctaaactt
tgtttcctccctcaccaagtctattaacatattgcaaacaatcccctccc
taaacaatgacaaacatctatcacccaccaaataccacctactccaattt
tttgggaatggggcattgttctcttaaaattgatgttgcatatctttcag
aatttgaagttccattagtagagactctatatccatagaaaagaggactc
agataattcaagattgatctaccctaaaatccttcttcctgctatccagt
ttctatagtaacaattggtaccatacaagttgacaatggaaggaagccat
taataatcctgcttagctgtgacatctttgatccacaataatgaccaata
tagcaagatgttttaattaggatccatattgaagtgattaacaccatgac
caaaaatggcttgaggaaaaacagtttatttcatctactgtttccaggca
aaagaccaccagtgagagtcaaggcaagaatctaattaggatgggaacct
ggaggcaagaaataatacagaggctgtgggaggagtatgcctttactggc
ttcctgggaagagggaaatgaggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89255150_89256041
seq2: B6Ng01-250J08.b_48_939

seq1  GAATTCAAAAAATTATATAGTAGTGAAAGTAAGTCAAAACACTGAGACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAAATTATATAGTAGTGAAAGTAAGTCAAAACACTGAGACTC  50

seq1  TTAGGAGAGTCATTATGTGCAATGTGCAGAGGCAGAAATTTAGTGGAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGAGTCATTATGTGCAATGTGCAGAGGCAGAAATTTAGTGGAACT  100

seq1  GCTGAGTTAAGCGCCATCGTGAATCTTTCTGGCCACTGCCTGGCAGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTTAAGCGCCATCGTGAATCTTTCTGGCCACTGCCTGGCAGTTTT  150

seq1  GCCCATGTCATTAATCATTAGAGCTTCACAGGAAAATGCATGTAGCTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGTCATTAATCATTAGAGCTTCACAGGAAAATGCATGTAGCTGAC  200

seq1  CTCAGAGTTCTAAGCTCTCTGAAGTATAATAAAGTCAAAAGTTAAAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGTTCTAAGCTCTCTGAAGTATAATAAAGTCAAAAGTTAAAGTTT  250

seq1  AAATAATGACAAGATCGCAATTATTATTTTGACCACAGGCCTGGGAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGACAAGATCGCAATTATTATTTTGACCACAGGCCTGGGAATAG  300

seq1  GGGAAGCTTGAAATTTTGGGGAGCAACTGTAAATCTTAATTCTTTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCTTGAAATTTTGGGGAGCAACTGTAAATCTTAATTCTTTGTGTG  350

seq1  ATGTGGTCATTCTTTTGAATTTGACTTGGTAATGATTATAGTCATCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTCATTCTTTTGAATTTGACTTGGTAATGATTATAGTCATCAATG  400

seq1  AAAGAATGGATAATGAAATTGTCATAAATGTACACAATGTACTCAGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATGGATAATGAAATTGTCATAAATGTACACAATGTACTCAGTTGT  450

seq1  TAAAATGGAATTATGAAAACTTCATTGAAATGAATGAATCTAGAGAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGGAATTATGAAAACTTCATTGAAATGAATGAATCTAGAGAAATA  500

seq1  ATCATCCTGGGTCGGTGTCACAAAGACTCCCTAAAAGTATTGTATGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCTGGGTCGGTGTCACAAAGACTCCCTAAAAGTATTGTATGTTTT  550

seq1  GTTACATATGTCTGCAAGATCTTCTAAGGAAAGAGAAATAGAATATACGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATATGTCTGCAAGATCTTCTAAGGAAAGAGAAATAGAATATACGG  600

seq1  TTATGGAGAAACAGGGACAGGAAAGGAGCTAAAGGGTTAAATAGGGATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGAGAAACAGGGACAGGAAAGGAGCTAAAGGGTTAAATAGGGATGG  650

seq1  AATGATTGAGAGATGTTAGGGAGGGACAACTAACACTAAGGACCATTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTGAGAGATGTTAGGGAGGGACAACTAACACTAAGGACCATTTGA  700

seq1  ATGGTTGCATGAAAACCTACTACCTTAGAAGCTTCTAAAAATATATACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGCATGAAAACCTACTACCTTAGAAGCTTCTAAAAATATATACAT  750

seq1  GATGTGAAATATATAAAAAGAACCACTCTAAGAATAAGGGAGGTACTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAAATATATAAAAAGAACCACTCTAAGAATAAGGGAGGTACTGCC  800

seq1  CTAACTAAATATCTTTCTTCCTTAATTAAAATCTCCACTGCCAGATATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAAATATCTTTCTTCCTTAATTAAAATCTCCACTGCCAGATATGG  850

seq1  GTAGTCACTGGTCAAAGCAGTTCCATGAAAATCCCCAAACAA  892
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCACTGGTCAAAGCAGTTCCATGAAAATCCCCAAACAA  892