BAC Information

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BAC

Clone NameB6Ng01-251A12
Chromosome2 (Build37)
Map Location 116,992,341 - 117,147,443
singlet/doubletdoublet
Overlap geneSpred1, LOC624574, 2610510H03Rik, Rasgrp1
Upstream geneLOC433464, Tmco5, LOC100043557, LOC241621
Downstream geneThbs1, Fsip1, Gpr176, 1700054M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251A12.bB6Ng01-251A12.g
ACCGA058409GA058410
length1,0081,093
definitionB6Ng01-251A12.b B6Ng01-251A12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,146,436 - 117,147,443)(116,992,341 - 116,993,421)
sequence
gaattcctccatctcttctacttgatggcgggctattactactgtggact
gttatttaaccagaggtgatattcaaaacacatagtaactaggacagccc
gggaccctatcaacctgaacaaatgccttttgaagcatcctgagtatcag
ccctgccactgtgcttttttctagatgaatatgcttcctgctcacctcgt
aaggctgtgctggtcaagtgaggtaatgcatgtgaaaactcttgtggagc
atatgtggaggctgcaggttcctccagtacccagtgtggggttggatccc
tgactttcactgtcacgctgattacagctccatttcactcaaaaccacct
ccctgcagcaaaccaatcaggagctcttaagcaactgatcaggacaccat
gagcccagcaagtcttggaatcaacccattagctctctatatattatctt
cttcaagccagccctctttgccatttttaggcaataagtatcaatatttt
cagacttttaagacatctcatcaaaatgttaaaacctgggaagacttttt
gaacattactgcaaattgactcacttgtggatagcgtttgctattgcacg
ttgaccttaaaaatccaggatccttaatgatttctgtacatttcaggcat
tctgactctcttctgtgtgacattaggctgctctgcccagatctgtgagt
ggattgacagtgattaacaaacactaagtttccctcttagttcctttgtc
tttacagcttcctgtctgcttttccaatgagttctttctgaagaattgtg
tttgagccaacactcactcatttccaccctgtgccccgtcccatctccaa
accgtgggaatacaaatcactagctacctccttctcctgaagacattcac
tctttcccactcacttctgattgcctctttgtgctcattgggccatttcc
agtcaatgtctcttcttgtgtgtgtgtaagcaatagacatgagattctgt
ccctgact

gaattcttaaattcactgtaacactgtacagtttatctagtggtatgcca
gagtttcagagaatgaatgagtgggggagaggtgcatgtgtgtaataggg
attgtgcacccagtacacatgtagaagtcagttcttccaccgtgtgggtt
ctaggggttgaatgtttgtcatcagggttggtggcaagttcttttatcca
ccgagtcatctcattggcccatggttacttaatttactacaagttgtttt
ctgaccatcatttgtaaaaacaattaggatatagaatatagtttaaaagt
ataacataacctgttacgcagtttttcagcttagtagaagattcaaattt
aaatgaatattttgagtaaagattatcaaatttaaatgaatattttgaaa
ggattaaatgtcaaagtagaaatctccattttgagtattcattaacttct
tcaacagatattaaaatctgtcataattattagatacagggttgtttggc
acaacatctttctgttctgaacagtttactgtcttgtagttgccaggaag
cgctgcgaagaactttctttttcagttacctttgaatgatctcagaactg
gtccatggtttgggtttaaagtcctatcttgtttgtattttactcctagt
gtcaactacagtcctgattataagcatagttgttacttaaaaacatttta
aagaaagatgctaaatttaaagttaggacttaaacaaaaaacaaaaacca
gctgtcatgttcttgttttcttagacttttctggtaaaacaaattaaagt
ttgttttgcttttgtttcttaatttctggtttgtgttgtttcaatgtcat
ttgtaatactttttccatccaggataagacagaatattgggcagttttaa
tttaagacaacccttaattgcgataaacacaaatgtacctttgttaacag
gattgagattgcacaaagaacagattctaggtgcctgtgtcttctgggca
gaaaagtaagaaccaactgtcagaagttaaaaaggctaagtttggtttac
tatgagaagccaatcagccttaatctaatttttttttttaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_117146436_117147443
seq2: B6Ng01-251A12.b_46_1053 (reverse)

seq1  AGTCAGGGACAGAATCTCATGTCTATTGCTTACACAACACACAAGAAGAG  50
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGTCAGGGACAGAATCTCATGTCTATTGCTTACAC-ACACACAAGAAGAG  49

seq1  ACATTGACTGGAAATGG-CCAATGAGCACAAAGAGGCAATCAGAAGTGAG  99
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACATTGACTGGAAATGGCCCAATGAGCACAAAGAGGCAATCAGAAGTGAG  99

seq1  TGGGAAAGAGTGAATGTCTTCAGGAGAAGGAGGTAGCTAGTGATTTGTAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAGAGTGAATGTCTTCAGGAGAAGGAGGTAGCTAGTGATTTGTAT  149

seq1  TCCCACGGTTTGGAGATGGGACGGGGCACAGGGTGGAAATGAGTGAGTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACGGTTTGGAGATGGGACGGGGCACAGGGTGGAAATGAGTGAGTGT  199

seq1  TGGCTCAAACACAATTCTTCAGAAAGAACTCATTGGAAAAGCAGACAGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAAACACAATTCTTCAGAAAGAACTCATTGGAAAAGCAGACAGGA  249

seq1  AGCTGTAAAGACAAAGGAACTAAGAGGGAAACTTAGTGTTTGTTAATCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTAAAGACAAAGGAACTAAGAGGGAAACTTAGTGTTTGTTAATCAC  299

seq1  TGTCAATCCACTCACAGATCTGGGCAGAGCAGCCTAATGTCACACAGAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATCCACTCACAGATCTGGGCAGAGCAGCCTAATGTCACACAGAAG  349

seq1  AGAGTCAGAATGCCTGAAATGTACAGAAATCATTAAGGATCCTGGATTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAGAATGCCTGAAATGTACAGAAATCATTAAGGATCCTGGATTTT  399

seq1  TAAGGTCAACGTGCAATAGCAAACGCTATCCACAAGTGAGTCAATTTGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTCAACGTGCAATAGCAAACGCTATCCACAAGTGAGTCAATTTGCA  449

seq1  GTAATGTTCAAAAAGTCTTCCCAGGTTTTAACATTTTGATGAGATGTCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTTCAAAAAGTCTTCCCAGGTTTTAACATTTTGATGAGATGTCTT  499

seq1  AAAAGTCTGAAAATATTGATACTTATTGCCTAAAAATGGCAAAGAGGGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTGAAAATATTGATACTTATTGCCTAAAAATGGCAAAGAGGGCT  549

seq1  GGCTTGAAGAAGATAATATATAGAGAGCTAATGGGTTGATTCCAAGACTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGAAGAAGATAATATATAGAGAGCTAATGGGTTGATTCCAAGACTT  599

seq1  GCTGGGCTCATGGTGTCCTGATCAGTTGCTTAAGAGCTCCTGATTGGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCTCATGGTGTCCTGATCAGTTGCTTAAGAGCTCCTGATTGGTTT  649

seq1  GCTGCAGGGAGGTGGTTTTGAGTGAAATGGAGCTGTAATCAGCGTGACAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGGGAGGTGGTTTTGAGTGAAATGGAGCTGTAATCAGCGTGACAG  699

seq1  TGAAAGTCAGGGATCCAACCCCACACTGGGTACTGGAGGAACCTGCAGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTCAGGGATCCAACCCCACACTGGGTACTGGAGGAACCTGCAGCC  749

seq1  TCCACATATGCTCCACAAGAGTTTTCACATGCATTACCTCACTTGACCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATATGCTCCACAAGAGTTTTCACATGCATTACCTCACTTGACCAG  799

seq1  CACAGCCTTACGAGGTGAGCAGGAAGCATATTCATCTAGAAAAAAGCACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCTTACGAGGTGAGCAGGAAGCATATTCATCTAGAAAAAAGCACA  849

seq1  GTGGCAGGGCTGATACTCAGGATGCTTCAAAAGGCATTTGTTCAGGTTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGGGCTGATACTCAGGATGCTTCAAAAGGCATTTGTTCAGGTTGA  899

seq1  TAGGGTCCCGGGCTGTCCTAGTTACTATGTGTTTTGAATATCACCTCTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTCCCGGGCTGTCCTAGTTACTATGTGTTTTGAATATCACCTCTGG  949

seq1  TTAAATAACAGTCCACAGTAGTAATAGCCCGCCATCAAGTAGAAGAGATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAACAGTCCACAGTAGTAATAGCCCGCCATCAAGTAGAAGAGATG  999

seq1  GAGGAATTC  1008
      |||||||||
seq2  GAGGAATTC  1008


seq1: chr2_116992341_116993421
seq2: B6Ng01-251A12.g_67_1159

seq1  GAATTCTTAAATTCACTGTAACACTGTACAGTTTATCTAGTGGTATGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAATTCACTGTAACACTGTACAGTTTATCTAGTGGTATGCCA  50

seq1  GAGTTTCAGAGAATGAATGAGTGGGGGAGAGGTGCATGTGTGTAATAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCAGAGAATGAATGAGTGGGGGAGAGGTGCATGTGTGTAATAGGG  100

seq1  ATTGTGCACCCAGTACACATGTAGAAGTCAGTTCTTCCACCGTGTGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGCACCCAGTACACATGTAGAAGTCAGTTCTTCCACCGTGTGGGTT  150

seq1  CTAGGGGTTGAATGTTTGTCATCAGGGTTGGTGGCAAGTTCTTTTATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGGTTGAATGTTTGTCATCAGGGTTGGTGGCAAGTTCTTTTATCCA  200

seq1  CCGAGTCATCTCATTGGCCCATGGTTACTTAATTTACTACAAGTTGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTCATCTCATTGGCCCATGGTTACTTAATTTACTACAAGTTGTTTT  250

seq1  CTGACCATCATTTGTAAAAACAATTAGGATATAGAATATAGTTTAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCATCATTTGTAAAAACAATTAGGATATAGAATATAGTTTAAAAGT  300

seq1  ATAACATAACCTGTTACGCAGTTTTTCAGCTTAGTAGAAGATTCAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATAACCTGTTACGCAGTTTTTCAGCTTAGTAGAAGATTCAAATTT  350

seq1  AAATGAATATTTTGAGTAAAGATTATCAAATTTAAATGAATATTTTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATATTTTGAGTAAAGATTATCAAATTTAAATGAATATTTTGAAA  400

seq1  GGATTAAATGTCAAAGTAGAAATCTCCATTTTGAGTATTCATTAACTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAATGTCAAAGTAGAAATCTCCATTTTGAGTATTCATTAACTTCT  450

seq1  TCAACAGATATTAAAATCTGTCATAATTATTAGATACAGGGTTGTTTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAGATATTAAAATCTGTCATAATTATTAGATACAGGGTTGTTTGGC  500

seq1  ACAACATCTTTCTGTTCTGAACAGTTTACTGTCTTGTAGTTGCCAGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATCTTTCTGTTCTGAACAGTTTACTGTCTTGTAGTTGCCAGGAAG  550

seq1  CGCTGCGAAGAACTTTCTTTTTCAGTTACCTTTGAATGATCTCAGAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGCGAAGAACTTTCTTTTTCAGTTACCTTTGAATGATCTCAGAACTG  600

seq1  GTCCATGGTTTGGGTTTAAAGTCCTATCTTGTTTGTATTTTACTCCTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGGTTTGGGTTTAAAGTCCTATCTTGTTTGTATTTTACTCCTAGT  650

seq1  GTCAACTACAGTCCTGATTATAAGCATAGTTGTTACTTAAAAACATTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTACAGTCCTGATTATAAGCATAGTTGTTACTTAAAAACATTTTA  700

seq1  AAGAAAGATGCTAAATTTAAAGTTAGGACTTAAACAAAAAACAAAAACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGATGCTAAATTTAAAGTTAGGACTTAAACAAAAAACAAAAACCA  750

seq1  GCTGTCATGTTCTTGTTTTCTTAGACTTTTCTGGTAAAAC-AATTAAAGT  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCTGTCATGTTCTTGTTTTCTTAGACTTTTCTGGTAAAACAAATTAAAGT  800

seq1  TTTGTTTGCTTTTGTTTCTTAA-TTCTGGTTTGTGTTTGTTTCAATGTCA  848
      ||  |||||||||||||||||| |||||||||||| ||||||||||||||
seq2  TTGTTTTGCTTTTGTTTCTTAATTTCTGGTTTGTG-TTGTTTCAATGTCA  849

seq1  TTTGTAATAC-TTTTCCATCCA-GATAAGACAGAATATT-GGCAGTTTTA  895
      |||||||||| ||||||||||| |||||||||||||||| ||||||||||
seq2  TTTGTAATACTTTTTCCATCCAGGATAAGACAGAATATTGGGCAGTTTTA  899

seq1  A-TTAAGACAA-CCTTAATTGCGATAAACACAAAATGTACCTT--GTAAC  941
      | ||||||||| ||||||||||||||||||| |||||||||||   ||||
seq2  ATTTAAGACAACCCTTAATTGCGATAAACAC-AAATGTACCTTTGTTAAC  948

seq1  AGGATTGAGATTGCACAAAGAACAGATCTTAGGTG-CTGTG-CTTCTGGG  989
      |||||||||||||||||||||||||||  |||||| ||||| ||||||||
seq2  AGGATTGAGATTGCACAAAGAACAGATTCTAGGTGCCTGTGTCTTCTGGG  998

seq1  CAGAAA--GAAGACCCAGCTGTCAGAAGTT-AAAAGGCTTAGTTTGTTTA  1036
      ||||||   |||| ||| |||||||||||| |||||||| |||||| || 
seq2  CAGAAAAGTAAGAACCAACTGTCAGAAGTTAAAAAGGCTAAGTTTGGTTT  1048

seq1  ACTATTGAGAAG-CAATCAGCTTTAATCTTATTTTTTTTTTTAATT  1081
      |||| ||||||| |||||||| ||||||| ||||||||||||||||
seq2  ACTA-TGAGAAGCCAATCAGCCTTAATCTAATTTTTTTTTTTAATT  1093


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