BAC Information

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BAC

Clone NameB6Ng01-251C07
Chromosome2 (Build37)
Map Location 155,007,737 - 155,121,067
singlet/doubletdoublet
Overlap geneItch, LOC668931, Dynlrb1, Map1lc3a, Cdc91l1
Upstream geneU46068, BC018465, 5430413K10Rik, OTTMUSG00000015915, Cdk5rap1, Snta1, Cbfa2t2, Apba2bp, 1700003F12Rik, E2f1, Pxmp4, Zfp341, Chmp4b, LOC668936, LOC435692, Raly, Eif2s2, a, Ahcy, LOC100043877
Downstream geneTrp53inp2, Ncoa6, LOC668938, Ggtl3, Acss2, Gss, Myh7b, Trpc4ap, Edem2, Procr, Mmp24, Itgb4bp, 5530400B04Rik, 2410003P15Rik, Gdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251C07.bB6Ng01-251C07.g
ACCGA058493GA058494
length1,081300
definitionB6Ng01-251C07.b B6Ng01-251C07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,007,737 - 155,008,820)(155,120,768 - 155,121,067)
sequence
gaattcagagtaatatatgctgtgtaatttgatgagacccatatatccac
atcttaggttttatttatcatcaactttttaatttttaaattaaaattct
gtgctggttttagatttcagaaagcaaaaacttctcttttacccaaactt
tgtatagcttctgtcaatggctcaccatccacgaattctgacagtgatgg
atctagtacaggctccttgccaccaacaaatacaaatgtaaatacaagta
catctgaaggagcaacatctggattaataattcctcttactatatctgga
ggctcgggccctaggcctctgaatactgtaagccaagctcccctaccacc
tgggtaagtaaccgttaatatttgggtttttaagcctttgcgtgtactca
ttaattgaaaaggattgtagtatattctttcataattgtcttttaagtaa
ttgtaattgatttggggagttttaaatccaagaaagcttactgtatttta
agtactacctcttcttttggggaagtaggaaaaaaatgagctaggtattt
tagcacatgcctataatctcagcacttgggtatctgaggcagaaggattg
ttgtgagttccaggacaacttgggctgcagcatgagatgtccctcagatg
tttttttgagcgttgagggtagactgttgcataccctgcactgacctcaa
actcactgtgtaggtgactgtagccttgaagtaccaaaccctctacctct
actgcccaagtatgcaccattacacatggaaaacaaaacacagtttctat
ggtgggatcccaccaccaccatagaaagttaacaaaagccaagtaataaa
aaattataagccgggcagtggtggcacacacctttaatcctagcacttgg
gacgcagaggtagtgaatttctgagttcgagggccagcctggtctacaga
gtgagttccaggacagccagggctacacagagaaaccctgtcttgtaaac
caaaaaaatagtaataaaagatttaagatctggactggctgctcttttag
aggaccaggtttggattctgtcttgtaactc
agtttgtagacagacagactacagcttgagtctacactctgcctttccca
ggcagcttctttagcctttctgcgcctctgagttttccttttccgtccat
gagatgaagagagtaagtggagctttctggcatggatctataaccctaac
acttaagaggctgaagcgggaggatagcaagtttgaggttagccaaggct
acaaaagggaattccaggccatatgagacctgactcaaaaaaaaaaaaag
tatttttcatggatttttttgggggtgtttttgttttttgggtttttttg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_155007737_155008820
seq2: B6Ng01-251C07.b_46_1126

seq1  GAATTCAGAGTAATATATGCTGTGTAATTTGATGAGACCCATATATCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGTAATATATGCTGTGTAATTTGATGAGACCCATATATCCAC  50

seq1  ATCTTAGGTTTTATTTATCATCAACTTTTTAATTTTTAAATTAAAATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGGTTTTATTTATCATCAACTTTTTAATTTTTAAATTAAAATTCT  100

seq1  GTGCTGGTTTTAGATTTCAGAAAGCAAAAACTTCTCTTTTACCCAAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGTTTTAGATTTCAGAAAGCAAAAACTTCTCTTTTACCCAAACTT  150

seq1  TGTATAGCTTCTGTCAATGGCTCACCATCCACGAATTCTGACAGTGATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGCTTCTGTCAATGGCTCACCATCCACGAATTCTGACAGTGATGG  200

seq1  ATCTAGTACAGGCTCCTTGCCACCAACAAATACAAATGTAAATACAAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTACAGGCTCCTTGCCACCAACAAATACAAATGTAAATACAAGTA  250

seq1  CATCTGAAGGAGCAACATCTGGATTAATAATTCCTCTTACTATATCTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAAGGAGCAACATCTGGATTAATAATTCCTCTTACTATATCTGGA  300

seq1  GGCTCGGGCCCTAGGCCTCTGAATACTGTAAGCCAAGCTCCCCTACCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCGGGCCCTAGGCCTCTGAATACTGTAAGCCAAGCTCCCCTACCACC  350

seq1  TGGGTAAGTAACCGTTAATATTTGGGTTTTTAAGCCTTTGCGTGTACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAGTAACCGTTAATATTTGGGTTTTTAAGCCTTTGCGTGTACTCA  400

seq1  TTAATTGAAAAGGATTGTAGTATATTCTTTCATAATTGTCTTTTAAGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGAAAAGGATTGTAGTATATTCTTTCATAATTGTCTTTTAAGTAA  450

seq1  TTGTAATTGATTTGGGGAGTTTTAAATCCAAGAAAGCTTACTGTATTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATTGATTTGGGGAGTTTTAAATCCAAGAAAGCTTACTGTATTTTA  500

seq1  AGTACTACCTCTTCTTTTGGGGAAGTAGGAAAAAAATGAGCTAGGTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTACCTCTTCTTTTGGGGAAGTAGGAAAAAAATGAGCTAGGTATTT  550

seq1  TAGCACATGCCTATAATCTCAGCACTTGGGTATCTGAGGCAGAAGGATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACATGCCTATAATCTCAGCACTTGGGTATCTGAGGCAGAAGGATTG  600

seq1  TTGTGAGTTCCAGGACAACTTGGGCTGCAGCATGAGATGTCCCTCAGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGTTCCAGGACAACTTGGGCTGCAGCATGAGATGTCCCTCAGATG  650

seq1  TTTTTTTGAGCGTTGAGGGTAGACTGTTGCATACCCTGCACTGACCTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGAGCGTTGAGGGTAGACTGTTGCATACCCTGCACTGACCTCAA  700

seq1  ACTCACTGTGTAGGTGACTGTAGCCTTGAAGTACCAAACCCTCTACCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTGTGTAGGTGACTGTAGCCTTGAAGTACCAAACCCTCTACCTCT  750

seq1  ACTGCCCAAGTATGCACCATTACACATGGAAAACAAAACACAGTTTCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCAAGTATGCACCATTACACATGGAAAACAAAACACAGTTTCTAT  800

seq1  GGTGGGATCCCACCACCACCATAGAAAGTTAACAAAAGCCAAGTAATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGATCCCACCACCACCATAGAAAGTTAACAAAAGCCAAGTAATAAA  850

seq1  AAATTATAAGCCGGGCAGTGGTGGCACACACCTTTAATCCTAGCACTTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATAAGCCGGGCAGTGGTGGCACACACCTTTAATCCTAGCACTTGG  900

seq1  GACGCAGAGGTAGTGAATTTCTGAGTTCGA-GGCCAGCCTGGTCTACAGA  949
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GACGCAGAGGTAGTGAATTTCTGAGTTCGAGGGCCAGCCTGGTCTACAGA  950

seq1  GTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGTAAAA  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGT-AAA  999

seq1  CCAAAAAAATAAGTAAATAAAAAGATTTAAGATCTGGAACTGGCTGCTCT  1049
      |||||||||| |||||   |||||||||||||||||| ||||||||||||
seq2  CCAAAAAAAT-AGTAA--TAAAAGATTTAAGATCTGG-ACTGGCTGCTCT  1045

seq1  TTTAGAGGACCCAGTTTTGATTCTGTC-TGTAACTC  1084
      |||||||||||  |||| ||||||||| ||||||||
seq2  TTTAGAGGACCAGGTTTGGATTCTGTCTTGTAACTC  1081

seq1: chr2_155120768_155121067
seq2: B6Ng01-251C07.g_72_371 (reverse)

seq1  CAAAAAAACCCAAAAAACAAAAACACCCCCAAAAAAATCCATGAAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAACCCAAAAAACAAAAACACCCCCAAAAAAATCCATGAAAAATA  50

seq1  CTTTTTTTTTTTTTGAGTCAGGTCTCATATGGCCTGGAATTCCCTTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTTTTTTGAGTCAGGTCTCATATGGCCTGGAATTCCCTTTTGT  100

seq1  AGCCTTGGCTAACCTCAAACTTGCTATCCTCCCGCTTCAGCCTCTTAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGGCTAACCTCAAACTTGCTATCCTCCCGCTTCAGCCTCTTAAGT  150

seq1  GTTAGGGTTATAGATCCATGCCAGAAAGCTCCACTTACTCTCTTCATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGGTTATAGATCCATGCCAGAAAGCTCCACTTACTCTCTTCATCTC  200

seq1  ATGGACGGAAAAGGAAAACTCAGAGGCGCAGAAAGGCTAAAGAAGCTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACGGAAAAGGAAAACTCAGAGGCGCAGAAAGGCTAAAGAAGCTGCC  250

seq1  TGGGAAAGGCAGAGTGTAGACTCAAGCTGTAGTCTGTCTGTCTACAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAGGCAGAGTGTAGACTCAAGCTGTAGTCTGTCTGTCTACAAACT  300