BAC Information

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BAC

Clone NameB6Ng01-251H12
Chromosome2 (Build37)
Map Location 93,641,360 - 93,785,949
singlet/doubletdoublet
Overlap geneExt2, 2610203E10Rik, Gm1967, Gm1335
Upstream geneSyt13, LOC100042784, Trp53i11, C230071H18Rik, Tspan18, LOC100042789, LOC639658, Cd82, Alx4
Downstream geneLOC620695, Alkbh3, Hsd17b12, E530001K10Rik, Ttc17, Itpa-ps1, Api5, LOC100043259
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251H12.bB6Ng01-251H12.g
ACCGA058723GA058724
length5191,113
definitionB6Ng01-251H12.b B6Ng01-251H12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,785,437 - 93,785,949)(93,641,360 - 93,642,476)
sequence
gaattccattaagtaaatgaataggcatcagcaaaatggcaagtgtgtgc
aaaggtcctctaaacctgaggacctgagtcccatctctgggacccacaag
tagacagacttgatttgcacaggctgtcatcctctgacctacctacctac
ataaacacacacacacacacacacacacacacacacacacacacacaaac
taactaaataaaaatgtaaaaagcaccttaaaaggaagatgaatacacac
tttataagattgagatggtaaatttctaagtcatatatccaaaaaggtat
tgtatctataatatttaggaaatatttacaactttacagcaaaggtgctt
ctagtaaaagtggacaaagggtgccagagagatgctcaactcccagcacc
cacagacagggtcaaccgcccgtaactctagtcccagggcaaccaactcc
ctcttccggcctccatgggtactgtacactcctggtgcatagacacacag
gcacaatacccatacacac
agttccacacggctgtgagaagcagctatcaatagcaacaagtctcattt
ttcccattgaaaaagctttaaaataaaaacaaaaccagcgtcgctctgct
ggacagcccccaggagatgtgggaaatccctgagaaacacctctcacaga
gggaggaccccagcatgctgccgccagggcccctccctgccttccccagg
gaagaggaccatgaagccaaagactgtcttcacttttagtctttggaggg
ataaagaggagtgtcctttataaaagcgcagctctgtggtagccagggag
gtgagcccttggctttctggggctaccatgaagacagtagagtctctcac
gggttactgaaccacagaattttaaaactaattgcaacctcaagtgatct
taaattccatatagtcataaataaaaatcaaaaagatcaaattactagga
aatacaatgacagtgaaaatctccaaaactgatcatcttaaagtggtctc
cggcatttcagtgcgtgcccactgctgggcttcagtgttttcatccttgg
gttgaatctggagtgatgatggagtcctgagccaacgggacaccagccag
atgaagacacagggccatcacagtgagctaaggaaaggacacgcagcaga
ctagtcctcacagtctcagggctgggcccagtgcttctcatgtttctcag
ccacagcctgaggatgtttggggccatttactctctgtggtggtgggatc
ctgtgcagaggggctagcatggcagacctgctgccatcgggtgaaagttc
tgttgggttggcttcttgactggtgtctgggaacttggactggagatggt
tcccatcacccacagaactggtaagagaggtcactgtgctccaaaacata
caaacaagactgtatgtgccaggcaaggccagcctatcccatgctacatt
gacgtgccaattgaagatcctggggtacatgacaaaaacttgcttgctct
acaggaacccagtggctcacacaggaccactcatccagaatgtaaacagg
atctgccttgacatgctgctgaagtacagcagcttctagctctggaggct
cttatgaactgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_93785437_93785949
seq2: B6Ng01-251H12.b_48_566 (reverse)

seq1  GTGTGTATGGGTATTGTGCCTGTGTGTCTATGCACCAGGAGTGTACAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATGGGTATTGTGCCTGTGTGTCTATGCACCAGGAGTGTACAGTA  50

seq1  CCCATGGAGGCCGGAAGAGGGAGTTGGTTGCCCTGGGACTAGAGTTACGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGAGGCCGGAAGAGGGAGTTGGTTGCCCTGGGACTAGAGTTACGG  100

seq1  GCGGTTGACCCTGTCTGTGGGTGCTGGGAGTTGAGCATCTCTCTGGCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTTGACCCTGTCTGTGGGTGCTGGGAGTTGAGCATCTCTCTGGCACC  150

seq1  CTTTGTCCACTTTTACTAGAAGCACCTTTGCTGTAAAGTTGTAAATATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCCACTTTTACTAGAAGCACCTTTGCTGTAAAGTTGTAAATATTT  200

seq1  CCTAAATATTATAGATACAATACCTTTTTGGATATATGACTTAGAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATATTATAGATACAATACCTTTTTGGATATATGACTTAGAAATTT  250

seq1  ACCATCTCAATCTTATAAAGTGTGTATTCATCTTCCTTTTAAGGTGCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTCAATCTTATAAAGTGTGTATTCATCTTCCTTTTAAGGTGCTTT  300

seq1  TTACATTTTTATTTAGTTAGTT------TGTGTGTGTGTGTGTGTGTGTG  344
      ||||||||||||||||||||||      ||||||||||||||||||||||
seq2  TTACATTTTTATTTAGTTAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTG  350

seq1  TGTGTGTGTGTGTGTTTATGTAGGTAGGTAGGTCAGAGGATGACAGCCTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTTTATGTAGGTAGGTAGGTCAGAGGATGACAGCCTG  400

seq1  TGCAAATCAAGTCTGTCTACTTGTGGGTCCCAGAGATGGGACTCAGGTCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATCAAGTCTGTCTACTTGTGGGTCCCAGAGATGGGACTCAGGTCC  450

seq1  TCAGGTTTAGAGGACCTTTGCACACACTTGCCATTTTGCTGATGCCTATT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTTAGAGGACCTTTGCACACACTTGCCATTTTGCTGATGCCTATT  500

seq1  CATTTACTTAATGGAATTC  513
      |||||||||||||||||||
seq2  CATTTACTTAATGGAATTC  519

seq1: chr2_93641360_93642476
seq2: B6Ng01-251H12.g_80_1192

seq1  AGTTCCACACGGCTGTGAGAAGCAGCTATCAATAGCAACAAGTCTCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCACACGGCTGTGAGAAGCAGCTATCAATAGCAACAAGTCTCATTT  50

seq1  TTCCCATTGAAAAAGCTTTAAAATAAAAACAAAACCAGCGTCGCTCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATTGAAAAAGCTTTAAAATAAAAACAAAACCAGCGTCGCTCTGCT  100

seq1  GGACAGCCCCCAGGAGATGTGGGAAATCCCTGAGAAACACCTCTCACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCCCCAGGAGATGTGGGAAATCCCTGAGAAACACCTCTCACAGA  150

seq1  GGGAGGACCCCAGCATGCTGCCGCCAGGGCCCCTCCCTGCCTTCCCCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGACCCCAGCATGCTGCCGCCAGGGCCCCTCCCTGCCTTCCCCAGG  200

seq1  GAAGAGGACCATGAAGCCAAAGACTGTCTTCACTTTTAGTCTTTGGAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGACCATGAAGCCAAAGACTGTCTTCACTTTTAGTCTTTGGAGGG  250

seq1  ATAAAGAGGAGTGTCCTTTATAAAAGCGCAGCTCTGTGGTAGCCAGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAGGAGTGTCCTTTATAAAAGCGCAGCTCTGTGGTAGCCAGGGAG  300

seq1  GTGAGCCCTTGGCTTTCTGGGGCTACCATGAAGACAGTAGAGTCTCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCCTTGGCTTTCTGGGGCTACCATGAAGACAGTAGAGTCTCTCAC  350

seq1  GGGTTACTGAACCACAGAATTTTAAAACTAATTGCAACCTCAAGTGATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTACTGAACCACAGAATTTTAAAACTAATTGCAACCTCAAGTGATCT  400

seq1  TAAATTCCATATAGTCATAAATAAAAATCAAAAAGATCAAATTACTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCCATATAGTCATAAATAAAAATCAAAAAGATCAAATTACTAGGA  450

seq1  AATACAATGACAGTGAAAATCTCCAAAACTGATCATCTTAAAGTGGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATGACAGTGAAAATCTCCAAAACTGATCATCTTAAAGTGGTCTC  500

seq1  CGGCATTTCAGTGCGTGCCCACTGCTGGGCTTCAGTGTTTTCATCCTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCATTTCAGTGCGTGCCCACTGCTGGGCTTCAGTGTTTTCATCCTTGG  550

seq1  GTTGAATCTGGAGTGATGATGGAGTCCTGAGCCAACGGGACACCAGCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATCTGGAGTGATGATGGAGTCCTGAGCCAACGGGACACCAGCCAG  600

seq1  ATGAAGACACAGGGCCATCACAGTGAGCTAAGGAAAGGACACGCAGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGACACAGGGCCATCACAGTGAGCTAAGGAAAGGACACGCAGCAGA  650

seq1  CTAGTCCTCACAGTCTCAGGGCTGGGCCCAGTGCTTCTCATGTTTCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCCTCACAGTCTCAGGGCTGGGCCCAGTGCTTCTCATGTTTCTCAG  700

seq1  CCACAGCCTGAGGATGTTTGGGGCCATTTACTCTCTGTGGTGGTGGGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCCTGAGGATGTTTGGGGCCATTTACTCTCTGTGGTGGTGGGATC  750

seq1  CTGTGCAGAGGGGCTAGCATGGCAGACCTGCTGCCATCGGGTGAAAGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAGAGGGGCTAGCATGGCAGACCTGCTGCCATCGGGTGAAAGTTC  800

seq1  TGTTGGGTTGGCTTCTTGACTGGTGTCTGGGAACTTGGACTGGAGATGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGTTGGCTTCTTGACTGGTGTCTGGGAACTTGGACTGGAGATGGT  850

seq1  TCCCATCACCCACAGAACTGGTAAGAGAGGTTCACTGTGC-CCAAAACAT  899
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  TCCCATCACCCACAGAACTGGTAAGAGAGG-TCACTGTGCTCCAAAACAT  899

seq1  ACAAACAAGACTGTATGTGCCAGGC-AGGCCAGCCTATCCCATGCTACAT  948
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACAAACAAGACTGTATGTGCCAGGCAAGGCCAGCCTATCCCATGCTACAT  949

seq1  TGACGTGCCAAATTGAAGATCCT-GGGTACATGACAAAAACTTGCTTGCT  997
      ||||||||| ||||||||||||| ||||||||||||||||||||||||||
seq2  TGACGTGCC-AATTGAAGATCCTGGGGTACATGACAAAAACTTGCTTGCT  998

seq1  CTACAGGAACCCAGTGGCCCACACA-GACCACCCATCCAGAATGTAACCA  1046
      |||||||||||||||||| |||||| |||||| |||||||||||||| ||
seq2  CTACAGGAACCCAGTGGCTCACACAGGACCACTCATCCAGAATGTAAACA  1048

seq1  GATCCTGCCTTGGAACAGGGTGCTGAAGTACAGCAGCTTTCCTAGCCTCT  1096
      |   ||||||||  ||| | |||||||||||||||||||  |||| ||||
seq2  GGATCTGCCTTG--ACATGCTGCTGAAGTACAGCAGCTT--CTAG-CTCT  1093

seq1  GAAGGCTCTATGAGAACTGTT  1117
      | ||||||| |  ||||||||
seq2  GGAGGCTCT-TATGAACTGTT  1113