BAC Information

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BAC

Clone NameB6Ng01-251H15
Chromosome2 (Build37)
Map Location 48,721,441 - 48,722,611
singlet/doubletsinglet
Overlap geneAcvr2a
Upstream geneLOC383691, LOC100041457, LOC383692
Downstream geneOrc4l, LOC100041508, Mbd5, LOC100042719, LOC666709, LOC435666, Epc2, Kif5c, 2310010M24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251H15.bB6Ng01-251H15.g
ACCGA058729GA058730
length1,1951,156
definitionB6Ng01-251H15.b B6Ng01-251H15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaccagctaaaaaaaatactaaaactagagatgggaaatcta
cagccaacatcatcctaatgaagaaatgctttaaaccatcaactgcagga
aggaagcattgatggtcactacccttactccttttcaatactgtgctcaa
ctactacatggatcaacaggcacaagaagaaaattaaaggtatacaaaga
gggaaaggagtcaaactatctccgtttgcaaatctcatgatattacacat
tagagaaccaaaaattgtttaaaaatgtctagaaggataactggagcaat
ttggcaggacacaatcaacaacattctatataccagcaataagaacagag
aggagaacatggacacactccacaatgttctaagtaaatgaaatatatag
gaataaacaatcaagaaacagctagatctctacaataaaaactttcagct
tttaaaagatagaaaaaagaaaacaactaaaaaatgtaaagaagcctctt
gctgattaattggtatagttgatgttaggaaatgaccaattttccacaag
ctatttacggatacaatgcaatcccattacaaaatccccatcaaattcct
cacagaaaaagaaaataaattatcgtaaaatttatatggaatcacaaaag
atgctggataagacagaaaaatactcaacaacaaaaacaacaaaatcaga
aacaatgcaggagaggctaccatttcagctttaagatacactacagtgta
ataacaataaaaatatattctattagctttcatggtacccgaggtcacca
tgaaggattccaaaggaaggaatcaaccaacagttctacccagctatgac
acctatttaccacaccaaccaggaaggcgcaattaccacaaaaagtgcag
tggtaacaagtttatattgacagtagccaatagttctcaaattagatcta
agatctactcaacaagagggaaatcataactgggtactggaaacttggtc
aactacccagggctaatgaagtcatcattcttggaggagaacctactaca
cattttacaacgcatatccccaagtacactaatactatcgtcttaacaag
cacagaataatataggtctcaatccagaaaacgtcttctcacgaactgag
acctttacagaaaacgagaaccaatcgaaaaaatggtttacacag

gaattccaggacagccagggctacacagagaaaccctgtctcaaaaaaag
tataatgtccttgctgggcttcgcttagaccctctttatgatgttgaaga
agttctttttttaattccaagtatgctgttgttgttaattataaatgggt
gttaaattttatctgatgtttcttctgtgttggtttatgtgcttatatta
attttcactagactgcagtgactaagtttgaatgctgaactagccttgca
tagctgaagtaagatgtggtgtcttagttttcatttttttaaatacatta
ttagattgtgtttgctaacattttgttaagaacttaacatccaagttagt
ggcctgtttttcctctgctgttactttatataagtgtggtacaatttcac
agtcatattgaaattaattagttgattgaaatgagtttttactttcaaat
gaataaggaagtattgtttttaatccagaagtgattgtgtataaaactag
cattgttatattattttaatatttggtgccaaaaaccaaattacatgaaa
ggcaatcttttaggtgaaatttcttttctttatatggaaaagtgtttttg
atttgattgtcttgggtgtttttttttttttttttgttctaccaaatttc
aaatcctttttatagcttgttttaatttttttcctagtggtaagaaaacg
aagcagttaatgctagttatcagtgcaagtactttacatgaaatggtgca
taagctactgagatgcttgattgtgattagagtttctgattttctacagt
tggacttgaattatggatctagagaaaaatgtggacactgaattagcctg
cttaatttattgatgtggaaagaggtagtgaaggatttgtttgcttgttc
aaggttagatatgaggttgtaggtttagtccagaaactttaagctaggaa
gggattattagtcttccatgagggggaaaaaacaaacacatagatatata
aatatgtagtatgccgtatgtgtgtgcatgtgtgtggctagtaactgcct
ctttcagatacagaatgacacagatgcatgaaccgcatgcagagcgtgcc
ttgcatggccactttatgccaatggttcttaaaaatggcagcttggaact
atttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_48721441_48722611
seq2: B6Ng01-251H15.g_68_1223

seq1  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAAG  50

seq1  TATAATGTCCTTGCTGGGCTTCGCTTAGACCCTCTTTATGATGTTGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGTCCTTGCTGGGCTTCGCTTAGACCCTCTTTATGATGTTGAAGA  100

seq1  AGTTCTTTTTTTAATTCCAAGTATGCTGTTGTTGTTAATTATAAATGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTTTTTAATTCCAAGTATGCTGTTGTTGTTAATTATAAATGGGT  150

seq1  GTTAAATTTTATCTGATGTTTCTTCTGTGTTGGTTTATGTGCTTATATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATTTTATCTGATGTTTCTTCTGTGTTGGTTTATGTGCTTATATTA  200

seq1  ATTTTCACTAGACTGCAGTGACTAAGTTTGAATGCTGAACTAGCCTTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCACTAGACTGCAGTGACTAAGTTTGAATGCTGAACTAGCCTTGCA  250

seq1  TAGCTGAAGTAAGATGTGGTGTCTTAGTTTTCATTTTTTTAAATACATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAAGTAAGATGTGGTGTCTTAGTTTTCATTTTTTTAAATACATTA  300

seq1  TTAGATTGTGTTTGCTAACATTTTGTTAAGAACTTAACATCCAAGTTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTGTGTTTGCTAACATTTTGTTAAGAACTTAACATCCAAGTTAGT  350

seq1  GGCCTGTTTTTCCTCTGCTGTTACTTTATATAAGTGTGGTACAATTTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTTTTTCCTCTGCTGTTACTTTATATAAGTGTGGTACAATTTCAC  400

seq1  AGTCATATTGAAATTAATTAGTTGATTGAAATGAGTTTTTACTTTCAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATATTGAAATTAATTAGTTGATTGAAATGAGTTTTTACTTTCAAAT  450

seq1  GAATAAGGAAGTATTGTTTTTAATCCAGAAGTGATTGTGTATAAAACTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGGAAGTATTGTTTTTAATCCAGAAGTGATTGTGTATAAAACTAG  500

seq1  CATTGTTATATTATTTTAATATTTGGTGCCAAAAACCAAATTACATGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTATATTATTTTAATATTTGGTGCCAAAAACCAAATTACATGAAA  550

seq1  GGCAATCTTTTAGGTGAAATTTCTTTTCTTTATATGGAAAAGTGTTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATCTTTTAGGTGAAATTTCTTTTCTTTATATGGAAAAGTGTTTTTG  600

seq1  ATTTGATTGTCTTGGGTGTTTTTTTTTTTTTTTTTGTTCTACCAAATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTGTCTTGGGTGTTTTTTTTTTTTTTTTTGTTCTACCAAATTTC  650

seq1  AAATCCTTTTTATAGCTTGTTTTAATTTTTTTCCTAGTGGTAAGAAAACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTTTTTATAGCTTGTTTTAATTTTTTTCCTAGTGGTAAGAAAACG  700

seq1  AAGCAGTTAATGCTAGTTATCAGTGCAAGTACTTTACATGAAATGGTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTTAATGCTAGTTATCAGTGCAAGTACTTTACATGAAATGGTGCA  750

seq1  TAAGCTACTGAGATGCTTGATTGTGATTAGAGTTTCTGATTTTCTACAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTACTGAGATGCTTGATTGTGATTAGAGTTTCTGATTTTCTACAGT  800

seq1  TGGACTTGAATTATGGATCTAGAGAAAAATGTGGACACTGAATTAGCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTGAATTATGGATCTAGAGAAAAATGTGGACACTGAATTAGCCTG  850

seq1  CTTAATTTATTGATGTGGAAAGAGGTAGTGAAGGATTTGTTTGCTTGTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTTATTGATGTGGAAAGAGGTAGTGAAGGATTTGTTTGCTTGTTC  900

seq1  AAGGTTAGATATGAGGTTGTAGGTTTAGTCCAGAAACTTTAAGCTAGGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTAGATATGAGGTTGTAGGTTTAGTCCAGAAACTTTAAGCTAGGAA  950

seq1  -GGATTATTAGGTCTTCCATGAGGGGGAAAAAAACAAAACACATAGATAT  999
       ||||||||| ||||||||||||||||||||||   ||||||||||||||
seq2  GGGATTATTA-GTCTTCCATGAGGGGGAAAAAA--CAAACACATAGATAT  997

seq1  ATAAATATGTAGTATG-CGTATGTGTGTGCATGTGTGTGGTTAAGTTACT  1048
      |||||||||||||||| ||||||||||||||||||||||| | ||| |||
seq2  ATAAATATGTAGTATGCCGTATGTGTGTGCATGTGTGTGGCT-AGTAACT  1046

seq1  GCCTCTTTTCCAGATACAGAAAATGACACCAAGAATGCATGAAACAGCAT  1098
      ||||||||  |||||||||  ||||||||  || ||||||| ||| ||||
seq2  GCCTCTTT--CAGATACAG--AATGACAC--AG-ATGCATG-AACCGCAT  1088

seq1  GCAAGAGTGTGCCTTGCATGCACACTTTTATGCCTAATTGTTTCTTTAAA  1148
      || |||| ||||||||||||  ||| ||||||||  | || |||||  ||
seq2  GC-AGAGCGTGCCTTGCATGGCCAC-TTTATGCC--AATGGTTCTT--AA  1132

seq1  AAATGGCAGCTTGG-ACTATTTGG  1171
      |||||||||||||| |||||||||
seq2  AAATGGCAGCTTGGAACTATTTGG  1156


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