BAC Information

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BAC

Clone NameB6Ng01-251N11
Chromosome2 (Build37)
Map Location 97,300,404 - 97,426,088
singlet/doubletdoublet
Overlap geneLrrc4c
Upstream geneLOC100043267
Downstream geneLOC621146, LOC664974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251N11.bB6Ng01-251N11.g
ACCGA058995GA058996
length659368
definitionB6Ng01-251N11.b B6Ng01-251N11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,425,430 - 97,426,088)(97,300,404 - 97,300,777)
sequence
gaattctgcaaactgttttcagaaatgaggaaagctagcatcttccagat
cagagatatttacaagtgcatagattcttttaaaactgtttttctcaaga
acatactagcagatgtagcaagtggtagcactgtgtataagtgaagaccg
ggaatggaaaatatcgctcatttgtatattctcaaaataatgggaggtag
ataataattaatagctatatttatacccctgatttaattaattccagctt
agatgtttgcaaacatgtgattttatatttgggtaaatgtgtcaatgtga
aaattagtcactagtacagacattgagaaaaaatagaggcccacagcaaa
aggcaaagcttgaggtaattctctgtgctctactttaagacattttgccc
attgaaatcaccaattatttttttaattgggtatttatttcattttcatt
tccaatgctataccaaaagtcccccacatgctcccccacccactccccta
ctcacccacttccacttcttggacctggcattcccctgtactgaggcata
tagagtttgcacaaccaatgggcctctctttccactgatggccgactagg
ccatcttctgatacatatgcagctagagacacgagctccgggggcggggg
ggggggtat

acagggcccccaatggaggagctagagaaagtacccaagaagctaaaggg
atctgcaaccctataggtgaaacaacattatgaactaaccagtactccgg
agctcttgtctctagctgcatatgtatcaaaagaaggcctagttggccat
cattgggaagagaggcccattggacttgcaaacttcatatgcctcagtac
aggggaacaccagggccaaaaagtgggagtgggtgggtagaggagtgagg
gcgtgggtatgggggacttttgggatttcattgggaaatgtaaatgagga
aaatacctaattaaaattgttaaaaaaaagttgttattccaatgaaaact
tgaatttctatttaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_97425430_97426088
seq2: B6Ng01-251N11.b_42_700 (reverse)

seq1  ATACCCCCCCCCCCGCCCCCGGAGCTCGTGTCTCTAGCTGCATATGTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCCCCCCCCCGCCCCCGGAGCTCGTGTCTCTAGCTGCATATGTATC  50

seq1  AGAAGATGGCCTAGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGGCCTAGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTTGTG  100

seq1  CAAACTCTATATGCCTCAGTACAGGGGAATGCCAGGTCCAAGAAGTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCTATATGCCTCAGTACAGGGGAATGCCAGGTCCAAGAAGTGGAA  150

seq1  GTGGGTGAGTAGGGGAGTGGGTGGGGGAGCATGTGGGGGACTTTTGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGAGTAGGGGAGTGGGTGGGGGAGCATGTGGGGGACTTTTGGTAT  200

seq1  AGCATTGGAAATGAAAATGAAATAAATACCCAATTAAAAAAATAATTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGGAAATGAAAATGAAATAAATACCCAATTAAAAAAATAATTGGT  250

seq1  GATTTCAATGGGCAAAATGTCTTAAAGTAGAGCACAGAGAATTACCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCAATGGGCAAAATGTCTTAAAGTAGAGCACAGAGAATTACCTCAA  300

seq1  GCTTTGCCTTTTGCTGTGGGCCTCTATTTTTTCTCAATGTCTGTACTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCCTTTTGCTGTGGGCCTCTATTTTTTCTCAATGTCTGTACTAGT  350

seq1  GACTAATTTTCACATTGACACATTTACCCAAATATAAAATCACATGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATTTTCACATTGACACATTTACCCAAATATAAAATCACATGTTTG  400

seq1  CAAACATCTAAGCTGGAATTAATTAAATCAGGGGTATAAATATAGCTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATCTAAGCTGGAATTAATTAAATCAGGGGTATAAATATAGCTATT  450

seq1  AATTATTATCTACCTCCCATTATTTTGAGAATATACAAATGAGCGATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTATCTACCTCCCATTATTTTGAGAATATACAAATGAGCGATATT  500

seq1  TTCCATTCCCGGTCTTCACTTATACACAGTGCTACCACTTGCTACATCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCCCGGTCTTCACTTATACACAGTGCTACCACTTGCTACATCTG  550

seq1  CTAGTATGTTCTTGAGAAAAACAGTTTTAAAAGAATCTATGCACTTGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATGTTCTTGAGAAAAACAGTTTTAAAAGAATCTATGCACTTGTAA  600

seq1  ATATCTCTGATCTGGAAGATGCTAGCTTTCCTCATTTCTGAAAACAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCTGATCTGGAAGATGCTAGCTTTCCTCATTTCTGAAAACAGTTT  650

seq1  GCAGAATTC  659
      |||||||||
seq2  GCAGAATTC  659


seq1: chr2_97300404_97300777
seq2: B6Ng01-251N11.g_64_437

seq1  GAATTCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGAAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGAAGCT  50

seq1  AAAGGGATCTGCAACCCTATAGGTGAAACAACATTATGAACTAACCAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGATCTGCAACCCTATAGGTGAAACAACATTATGAACTAACCAGTA  100

seq1  CTCCGGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGAAGGCCTAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGAAGGCCTAGTT  150

seq1  GGCCATCATTGGGAAGAGAGGCCCATTGGACTTGCAAACTTCATATGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCATTGGGAAGAGAGGCCCATTGGACTTGCAAACTTCATATGCCT  200

seq1  CAGTACAGGGGAACACCAGGGCCAAAAAGTGGGAGTGGGTGGGTAGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAGGGGAACACCAGGGCCAAAAAGTGGGAGTGGGTGGGTAGAGGA  250

seq1  GTGAGGGCGTGGGTATGGGGGACTTTTGGGATAGCATTGGGAAATGTAAA  300
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  GTGAGGGCGTGGGTATGGGGGACTTTTGGGATTTCATTGGGAAATGTAAA  300

seq1  TGAGGAAAATACCTAATTAAAATTGTTAAAAAAAAGTTGTTATTCCAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAAATACCTAATTAAAATTGTTAAAAAAAAGTTGTTATTCCAATG  350

seq1  AAAACTTGAATTTCTATTTAAAAA  374
      ||||||||||||||||||||||||
seq2  AAAACTTGAATTTCTATTTAAAAA  374


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