BAC Information

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BAC

Clone NameB6Ng01-252H22
Chromosome2 (Build37)
Map Location 146,779,100 - 146,780,285
singlet/doubletsinglet
Overlap geneGm114
Upstream gene4930529M08Rik, Insm1, A230067G21Rik, LOC668918
Downstream geneXrn2, Nkx2-4, Nkx2-2, LOC100043816, LOC668919, LOC668920, Pax1, LOC640914, A530006G24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252H22.bB6Ng01-252H22.g
ACCGA059476GA059477
length2361,186
definitionB6Ng01-252H22.b B6Ng01-252H22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcttgctcagggaagaacaacattttatcctattcgatatttcagtggtt
tggaaggggcctgcctacattaggtaggctaacactttatacctgattta
aatgcttacttcatgcaaggtacccaaggtccagaaacactctagagtcc
tttaaataagattggctccataggctcatatatttgaatgtttgggaagt
atctttaggaggtgtggccttgttggactaggtgtg
gaattcaaggccagcctggtctactaagagagttctaccagccagagcta
cagggagaaacaccatcttgaaaaaaacaacaacaacaaaaaacaaaaaa
aacaaagaatcaaaatacacttgcccaaactacctgcagcgccaccttct
cagctctacatgcctgctgagcagttctgctctgagcaaggcattgctct
cctgagacctcatttataaaatgagggggttggacaaacgcctcaattca
gactgtatgtcccaaatgtgacctgcactaagatctttctgaagcaatag
aaataggatctccttcaggacagaggccttgctttataccttaagagact
atgatttttggagctaaatcatagtcaccaaaacggctggctctccctgg
gagcttttcacttccaggcctgggctgggtctttagccttaagtggcaca
ctgaatcattaaagcaaccaaaataaatgacagtgccacagctcttacta
acatgtattctctaaatacagacagatagcacatgccttgaaaaagtatc
tgtcagaggaagacatgtttgagataactggaaacctgaatatggttcat
gaattatatgaatcataagaactcactgtgcaactctgatatgagaaata
gagtatggtgatcatagaaaattaaagccactctgagctggaaagatggc
tcagttggtggttgagtactggttcttccagaggacctagggttcaattc
ccagtacccccatggtggttcataatcaactgcaactatggttctagaga
ctccaacattctcttctgacatccatcagtaccacacatgcacatggtac
atattcacattggcaagaacaagaacacacataaaataaaacatgtaagt
ctaaaatttaaaaaatgcatatatactttcttctatattatgttccttct
ataatggtgttaaattgaatatataaagaacatatataaatgaaaaccac
attgttacagtggggagaatgttaagaaatttaaattgaaatgaatcctt
agactaagaaactattgttttagccttaaacgtaagctttcttggcggtc
taccagtctttcatttataacagcgggaaaattcttctagccattcccca
tgatggacaggcagccagaccgttccttacgaaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_146779100_146780285
seq2: B6Ng01-252H22.g_69_1254 (reverse)

seq1  TATTTCGTAAGGACAGCTCTGTGCTGCATGTCCACTCTTGTGGGAGTGCT  50
      |||||||||||||  | |||| ||||| |||||| || || || |  |||
seq2  TATTTCGTAAGGAACGGTCTG-GCTGCCTGTCCA-TCATGGGGAATGGCT  48

seq1  GGGAGA--TTCTCCGCTGTTAT-AATGAAAGGACT-GTAGA-CGCCAAGA  95
       | |||  ||  |||||||||| ||||||| |||| ||||| ||||||||
seq2  AGAAGAATTTTCCCGCTGTTATAAATGAAA-GACTGGTAGACCGCCAAGA  97

seq1  AAGCTAACGTTT-AGGCTTAAAC-ATAGTTTCTTTAGTCTAGGGTTTCAT  143
      ||||| |||||| ||||| |||| |||||||| |||||||| || |||||
seq2  AAGCTTACGTTTAAGGCTAAAACAATAGTTTC-TTAGTCTAAGGATTCAT  146

seq1  TTCAATTTAAATTTTCTTACATTCT-CCCACTGTA--CATGTGGTTTTCA  190
      ||||||||||||||  | ||||||| |||||||||   ||||||||||||
seq2  TTCAATTTAAATTTCTTAACATTCTCCCCACTGTAACAATGTGGTTTTCA  196

seq1  TTTTATTATATGTTCTTTTTATATATTCAATTTAACACCCATTATAGAAG  240
      |||   |||||||||  |||||||||||||||||||| ||||||||||||
seq2  TTT--ATATATGTTC--TTTATATATTCAATTTAACA-CCATTATAGAAG  241

seq1  GAACATAATATAGAAGAAAGTATATATGCATTTTTTTAAATTTTAGACTT  290
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAACATAATATAGAAGAAAGTATATATGCA-TTTTTTAAATTTTAGACTT  290

seq1  ACATGTTTTATTTTATGTGTGTTCTTGTTCTTGCCAATGTGAATATGTAC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTTTATTTTATGTGTGTTCTTGTTCTTGCCAATGTGAATATGTAC  340

seq1  CATGTGCATGTGTGGTACTGATGGATGTCAGAAGAGAATGTTGGAGTCTC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCATGTGTGGTACTGATGGATGTCAGAAGAGAATGTTGGAGTCTC  390

seq1  TAGAACCATAGTTGCAGTTGATTATGAACCACCATGGGGGTACTGGGAAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCATAGTTGCAGTTGATTATGAACCACCATGGGGGTACTGGGAAT  440

seq1  TGAACCCTAGGTCCTCTGGAAGAACCAGTACTCAACCACCAACTGAGCCA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCTAGGTCCTCTGGAAGAACCAGTACTCAACCACCAACTGAGCCA  490

seq1  TCTTTCCAGCTCAGAGTGGCTTTAATTTTCTATGATCACCATACTCTATT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAGCTCAGAGTGGCTTTAATTTTCTATGATCACCATACTCTATT  540

seq1  TCTCATATCAGAGTTGCACAGTGAGTTCTTATGATTCATATAATTCATGA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATATCAGAGTTGCACAGTGAGTTCTTATGATTCATATAATTCATGA  590

seq1  ACCATATTCAGGTTTCCAGTTATCTCAAACATGTCTTCCTCTGACAGATA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATTCAGGTTTCCAGTTATCTCAAACATGTCTTCCTCTGACAGATA  640

seq1  CTTTTTCAAGGCATGTGCTATCTGTCTGTATTTAGAGAATACATGTTAGT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCAAGGCATGTGCTATCTGTCTGTATTTAGAGAATACATGTTAGT  690

seq1  AAGAGCTGTGGCACTGTCATTTATTTTGGTTGCTTTAATGATTCAGTGTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTGTGGCACTGTCATTTATTTTGGTTGCTTTAATGATTCAGTGTG  740

seq1  CCACTTAAGGCTAAAGACCCAGCCCAGGCCTGGAAGTGAAAAGCTCCCAG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAAGGCTAAAGACCCAGCCCAGGCCTGGAAGTGAAAAGCTCCCAG  790

seq1  GGAGAGCCAGCCGTTTTGGTGACTATGATTTAGCTCCAAAAATCATAGTC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCCAGCCGTTTTGGTGACTATGATTTAGCTCCAAAAATCATAGTC  840

seq1  TCTTAAGGTATAAAGCAAGGCCTCTGTCCTGAAGGAGATCCTATTTCTAT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGGTATAAAGCAAGGCCTCTGTCCTGAAGGAGATCCTATTTCTAT  890

seq1  TGCTTCAGAAAGATCTTAGTGCAGGTCACATTTGGGACATACAGTCTGAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAGAAAGATCTTAGTGCAGGTCACATTTGGGACATACAGTCTGAA  940

seq1  TTGAGGCGTTTGTCCAACCCCCTCATTTTATAAATGAGGTCTCAGGAGAG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCGTTTGTCCAACCCCCTCATTTTATAAATGAGGTCTCAGGAGAG  990

seq1  CAATGCCTTGCTCAGAGCAGAACTGCTCAGCAGGCATGTAGAGCTGAGAA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCCTTGCTCAGAGCAGAACTGCTCAGCAGGCATGTAGAGCTGAGAA  1040

seq1  GGTGGCGCTGCAGGTAGTTTGGGCAAGTGTATTTTGATTCTTTGTTTTTT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCGCTGCAGGTAGTTTGGGCAAGTGTATTTTGATTCTTTGTTTTTT  1090

seq1  TTGTTTTTTGTTGTTGTTGTTTTTTTCAAGATGGTGTTTCTCCCTGTAGC  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTTGTTGTTGTTGTTTTTTTCAAGATGGTGTTTCTCCCTGTAGC  1140

seq1  TCTGGCTGGTAGAACTCTCTTAGTAGACCAGGCTGGCCTTGAATTC  1186
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTGGTAGAACTCTCTTAGTAGACCAGGCTGGCCTTGAATTC  1186