BAC Information

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BAC

Clone NameB6Ng01-252M18
Chromosome2 (Build37)
Map Location 132,138,282 - 132,139,391
singlet/doubletsinglet
Overlap genenone
Upstream geneRnf24, LOC100043463, Smox, Adra1d, Lamr1-ps1, Prnp, Prnd, Rassf2, Slc23a2, LOC626513, LOC100043470, EG329521, 5730494N06Rik, Pcna, Cds2
Downstream geneProkr2, 1700026D11Rik, Prei4, LOC100043781, LOC383801, LOC668906, Chgb, 3300001M20Rik, Mcm8, Crls1, B430119L13Rik, 5830467P10Rik, LOC668908, LOC100043785
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252M18.bB6Ng01-252M18.g
ACCGA059697GA059698
length1,103500
definitionB6Ng01-252M18.b B6Ng01-252M18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagattctcaaacctggctgcaggtgaaaaatcccaaggtgtt
tcagaaagttccagtatccaggcagtctagaccagttaaatcggaaatgc
taaggatcagacttgaacaccattgttttataaaaacctcattctgtggt
tctaatatgcatcaacgggtgagtaaaaatggttgactctccttgcagtg
aaggcagttttcttaccacctccacggtggctgcccccccccaaccccct
gctgggacatccccaggatgctctgatgtgacccttctggtgtagtgatg
ctcttcaggccagtgggggcccctggtatagagtgatgcccatctctggt
acctctgccaactccttcctgtacctcagacttgatttttcttgcagaat
taagtgtcgagaatgtttctcacccgtctcctgtctctcctttagcctcc
tggccttcctttgccccaaatttctcttctttatttttcagaagacagac
tgttccccgagtccccctactgctgtgctggcctttgtctagatatatgt
ttatccttttggagtttcccatcctgtctgtagttgcatgtatgcaagtg
cattagaggggctgtgcatggggctatgcttgctaagaggcagctgtgcc
ctcctgtacattcaagggttccctcaccaaggctgccatggtttaccatg
gtggtcactatgcagaggacccaagcaggagctctgtggatgccaggtgc
tctcccagggagaaagaggggagccacaggacagagagggggaataggac
agagagagagcataagaagagaggggggcataggatgcagagggggcata
ggacagagggacataggaggcagaggggtcataggacagtgaggggggca
taggacagagggacatagatgcagaggggtcataggacagtgaggggggc
ataggacagaggcgggcataggataaagaggggtataggacagagggcgt
aagactgaaaggggtcgataggacagagagggggcgttggacggagaggg
gccattaggacagaggggcataggacaggggcaataggacagaaagggtc
cat
gaattctttgttcatggatggacctggagggcatcatcctgagtgaggta
acacattcacaaaggaactcacacaatatgtactcactgataagtggata
ttagcccaaaacctaggatacccaagatataagatacaattttctaaaca
catgaaactcaagaaaaatgaagactgaagtgtggacactatgcccctcc
ttagaagtgggaacaaaacacccttggaaggagctacagagacaaagttt
ggagctgagatgaaaggatggtccatgtagagacttccatatccagggat
ccaccccataatcagcatccaaacgctgacaccattgcatacactagcaa
gattttattgaaaggacccagatgtagctgtctcttgtgagactaggccg
gggcctagcaaacacagaagtggatgctcacagtcagctaatggatggat
cacagggctcccaatggaggagctagagaaagtacccaaggagctaaagg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_132138282_132139391
seq2: B6Ng01-252M18.b_53_1155

seq1  GAATTCAGAGATTCTCAAACCTGGCTGCAGGTGAAAAATCCCAAGGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGATTCTCAAACCTGGCTGCAGGTGAAAAATCCCAAGGTGTT  50

seq1  TCAGAAAGTTCCAGTATCCAGGCAGTCTAGACCAGTTAAATCGGAAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGTTCCAGTATCCAGGCAGTCTAGACCAGTTAAATCGGAAATGC  100

seq1  TAAGGATCAGACTTGAACACCATTGTTTTATAAAAACCTCATTCTGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATCAGACTTGAACACCATTGTTTTATAAAAACCTCATTCTGTGGT  150

seq1  TCTAATATGCATCAACGGGTGAGTAAAAATGGTTGACTCTCCTTGCAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATATGCATCAACGGGTGAGTAAAAATGGTTGACTCTCCTTGCAGTG  200

seq1  AAGGCAGTTTTCTTACCACCTCCACGGTGGCTGCCCCCCCCCAACCCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGTTTTCTTACCACCTCCACGGTGGCTGCCCCCCCCCAACCCCCT  250

seq1  GCTGGGACATCCCCAGGATGCTCTGATGTGACCCTTCTGGTGTAGTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGACATCCCCAGGATGCTCTGATGTGACCCTTCTGGTGTAGTGATG  300

seq1  CTCTTCAGGCCAGTGGGGGCCCCTGGTATAGAGTGATGCCCATCTCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAGGCCAGTGGGGGCCCCTGGTATAGAGTGATGCCCATCTCTGGT  350

seq1  ACCTCTGCCAACTCCTTCCTGTACCTCAGACTTGATTTTTCTTGCAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGCCAACTCCTTCCTGTACCTCAGACTTGATTTTTCTTGCAGAAT  400

seq1  TAAGTGTCGAGAATGTTTCTCACCCGTCTCCTGTCTCTCCTTTAGCCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTCGAGAATGTTTCTCACCCGTCTCCTGTCTCTCCTTTAGCCTCC  450

seq1  TGGCCTTCCTTTGCCCCAAATTTCTCTTCTTTATTTTTCAGAAGACAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTCCTTTGCCCCAAATTTCTCTTCTTTATTTTTCAGAAGACAGAC  500

seq1  TGTTCCCCGAGTCCCCCTACTGCTGTGCTGGCCTTTGTCTAGATATATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCCGAGTCCCCCTACTGCTGTGCTGGCCTTTGTCTAGATATATGT  550

seq1  TTATCCTTTTGGAGTTTCCCATCCTGTCTGTAGTTGCATGTATGCAAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTTTTGGAGTTTCCCATCCTGTCTGTAGTTGCATGTATGCAAGTG  600

seq1  CATTAGAGGGGCTGTGCATGGGGCTATGCTTGCTAAGAGGCAGCTGTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGAGGGGCTGTGCATGGGGCTATGCTTGCTAAGAGGCAGCTGTGCC  650

seq1  CTCCTGTACATTCAAGGGTTCCCTCACCAAGGCTGCCATGGTTTACCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTACATTCAAGGGTTCCCTCACCAAGGCTGCCATGGTTTACCATG  700

seq1  GTGGTCACTATGCAGAGGACCCAAGCAGGAGCTCTGTGGATGCCAGGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCACTATGCAGAGGACCCAAGCAGGAGCTCTGTGGATGCCAGGTGC  750

seq1  TCTCCCAGGGAGAAAGAGGGGAGCCACAGGACAGAGAGGGGGAATAGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAGGGAGAAAGAGGGGAGCCACAGGACAGAGAGGGGGAATAGGAC  800

seq1  AGAGAGAGAGCATAAGAAGAGAGGGGGGCATAGGATGCAGAGGGGGCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGCATAAGAAGAGAGGGGGGCATAGGATGCAGAGGGGGCATA  850

seq1  GGACAGAGGGACATAGGAGGCAGAGGGGTCATAGGACAGTGAGGGGGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAGGGACATAGGAGGCAGAGGGGTCATAGGACAGTGAGGGGGGCA  900

seq1  TAGGACAGAGGGACATAGGATGCAGAGGGGTCATAGGACAGTGAGGGGGG  950
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAGGACAGAGGGACATA-GATGCAGAGGGGTCATAGGACAGTGAGGGGGG  949

seq1  CATAGGACAGAGGCGGGCATAGGATAAAGAGGGGGTATAGGACAGAGGGG  1000
      |||||||||||||||||||||||||||||| ||||||||||||||| |||
seq2  CATAGGACAGAGGCGGGCATAGGATAAAGA-GGGGTATAGGACAGA-GGG  997

seq1  CGTAAGACCGAGAGGGGGTCGATAGGACAGAGAGGGGGCGTTGGACGGAG  1050
      |||||||| || | ||||||||||||||||||||||||||||||||||||
seq2  CGTAAGACTGA-AAGGGGTCGATAGGACAGAGAGGGGGCGTTGGACGGAG  1046

seq1  AGGGGGCCATAGGACAGAGGGGGCCATAGGACAGGGGGCATAGGACAGAG  1100
      ||||| |  |||||||||||||  |||||||||||||  |||||||||| 
seq2  AGGGGCCATTAGGACAGAGGGG--CATAGGACAGGGGCAATAGGACAGA-  1093

seq1  AGGGGTCCAT  1110
      | ||||||||
seq2  AAGGGTCCAT  1103