BAC Information

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BAC

Clone NameB6Ng01-253B21
Chromosome2 (Build37)
Map Location 168,987,521 - 169,123,834
singlet/doubletdoublet
Overlap genenone
Upstream geneAdnp, Dpm1, Mocs3, LOC100043908, Kcng1, LOC668952, Nfatc2, Atp9a, Sall4, Zfp64, LOC100043909
Downstream geneEG668954, Tshz2, LOC100043737, LOC100043910, Zfp217, Silg111
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253B21.bB6Ng01-253B21.g
ACCGA059938GA059939
length498681
definitionB6Ng01-253B21.b B6Ng01-253B21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(168,987,521 - 168,988,024)(169,123,154 - 169,123,834)
sequence
ctcttttcgtgatcctaaaatccagtcaggttgacaatgaaaattagcca
gtatagacagagaaaattaaccacagagccaccaaattccagtatttgcc
tattcaacaaatacatgatattttcattcccgtgggactgccctcctggg
aaacaaacaacaacaacaaaaaaggagacagcaaagaattcatgatagga
cctgttggattgtggtctctgctcttctatatagaaatttcaggagtgat
cccattgatgcaagtagtcctctacgaagagaataccaggcaacatgaac
tgtaaacagtcaaatgccaaagtgggaagagatgaggcgtggtgtgcatg
tgggcatggcgggatccaagcaagagcgagacgtggtgcaagagcttcat
ttcaggcaagaaggaagtcatgggaggaggttgagggtcagagccacagg
atgcaagtgtctatgtttcatggttaagttggaggttgggggggggga
gaattcactgaaaggaaaagataatgaggtcaaagccagaggtggggacg
ggaggaaacagcgaggcttcatttggaaccagtggagggaactcaaagaa
taggatcccaatgaaaggctcaacgcaagcgcagggactaggcgcggggg
ttgcggaggagacaaaaggacgcaggcattaataaagcagaagagaaaat
gaaaacacgacacaaagccccgtggttccacatacaagccagggtacata
caaacgccaataaaagcagagaaaggaggaacaaagggcgtcatagcaac
cccggagagtgccgttgtgctacaagctgcagcgcacatggtcatccatc
aaaggctctccacacccaaacacacgtccatgccggccgggatggctatg
cctccctagccagaggaatccaggccctggcaacacacacttatctccct
ctctttacccttccctccctctcttcaaactcaagccagttttgcacaaa
gcttccctgtttcctgacagctgcccctgaaaggcagagaaatccaacct
ggacccagagtcgcatatcccagattatacttccccaaattattccagat
caggacaaagtatagctttcccttatgccctgagagagagagagagagag
agagagagagagagagagagggagggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_168987521_168988024
seq2: B6Ng01-253B21.b_43_546

seq1  GAATTCCTCTTTTCGTGATCCTAAAATCCAGTCAGGTTGACAATGAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTTTCGTGATCCTAAAATCCAGTCAGGTTGACAATGAAAAT  50

seq1  TAGCCAGTATAGACAGAGAAAATTAACCACAGAGCCACCAAATTCCAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGTATAGACAGAGAAAATTAACCACAGAGCCACCAAATTCCAGTA  100

seq1  TTTGCCTATTCAACAAATACATGATATTTTCATTCCCGTGGGACTGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTATTCAACAAATACATGATATTTTCATTCCCGTGGGACTGCCCT  150

seq1  CCTGGGAAACAAACAACAACAACAAAAAAGGAGACAGCAAAGAATTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAAACAAACAACAACAACAAAAAAGGAGACAGCAAAGAATTCATG  200

seq1  ATAGGACCTGTTGGATTGTGGTCTCTGCTCTTCTATATAGAAATTTCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGACCTGTTGGATTGTGGTCTCTGCTCTTCTATATAGAAATTTCAGG  250

seq1  AGTGATCCCATTGATGCAAGTAGTCCTCTACGAAGAGAATACCAGGCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCCCATTGATGCAAGTAGTCCTCTACGAAGAGAATACCAGGCAAC  300

seq1  ATGAACTGTAAACAGTCAAATGCCAAAGTGGGAAGAGATGAGGCGTGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTGTAAACAGTCAAATGCCAAAGTGGGAAGAGATGAGGCGTGGTG  350

seq1  TGCATGTGGGCATGGCGGGATCCAAGCAAGAGCGAGACGTGGTGCAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGGGCATGGCGGGATCCAAGCAAGAGCGAGACGTGGTGCAAGAG  400

seq1  CTTCATTTCAGGCAAGAAGGAAGTCATGGGAGGAGGTTGAGGGTCAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTCAGGCAAGAAGGAAGTCATGGGAGGAGGTTGAGGGTCAGAGC  450

seq1  CACAGGATGCAAGTGTCTATGTTTCATGGTTAAGTTGGAGGTTGGGGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGATGCAAGTGTCTATGTTTCATGGTTAAGTTGGAGGTTGGGGGGG  500

seq1  GGGA  504
      ||||
seq2  GGGA  504

seq1: chr2_169123154_169123834
seq2: B6Ng01-253B21.g_68_748 (reverse)

seq1  TCCCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50

seq1  AGGGCATAAGGGAAAGCTATACTTTGTCCTGATCTGGAATAATTTGGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATAAGGGAAAGCTATACTTTGTCCTGATCTGGAATAATTTGGGGA  100

seq1  AGTATAATCTGGGATATGCGACTCTGGGTCCAGGTTGGATTTCTCTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAATCTGGGATATGCGACTCTGGGTCCAGGTTGGATTTCTCTGCCT  150

seq1  TTCAGGGGCAGCTGTCAGGAAACAGGGAAGCTTTGTGCAAAACTGGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGGCAGCTGTCAGGAAACAGGGAAGCTTTGTGCAAAACTGGCTTG  200

seq1  AGTTTGAAGAGAGGGAGGGAAGGGTAAAGAGAGGGAGATAAGTGTGTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAAGAGAGGGAGGGAAGGGTAAAGAGAGGGAGATAAGTGTGTGTT  250

seq1  GCCAGGGCCTGGATTCCTCTGGCTAGGGAGGCATAGCCATCCCGGCCGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCCTGGATTCCTCTGGCTAGGGAGGCATAGCCATCCCGGCCGGC  300

seq1  ATGGACGTGTGTTTGGGTGTGGAGAGCCTTTGATGGATGACCATGTGCGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACGTGTGTTTGGGTGTGGAGAGCCTTTGATGGATGACCATGTGCGC  350

seq1  TGCAGCTTGTAGCACAACGGCACTCTCCGGGGTTGCTATGACGCCCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTTGTAGCACAACGGCACTCTCCGGGGTTGCTATGACGCCCTTTG  400

seq1  TTCCTCCTTTCTCTGCTTTTATTGGCGTTTGTATGTACCCTGGCTTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTTTCTCTGCTTTTATTGGCGTTTGTATGTACCCTGGCTTGTAT  450

seq1  GTGGAACCACGGGGCTTTGTGTCGTGTTTTCATTTTCTCTTCTGCTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACCACGGGGCTTTGTGTCGTGTTTTCATTTTCTCTTCTGCTTTAT  500

seq1  TAATGCCTGCGTCCTTTTGTCTCCTCCGCAACCCCCGCGCCTAGTCCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCTGCGTCCTTTTGTCTCCTCCGCAACCCCCGCGCCTAGTCCCTG  550

seq1  CGCTTGCGTTGAGCCTTTCATTGGGATCCTATTCTTTGAGTTCCCTCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTGCGTTGAGCCTTTCATTGGGATCCTATTCTTTGAGTTCCCTCCAC  600

seq1  TGGTTCCAAATGAAGCCTCGCTGTTTCCTCCCGTCCCCACCTCTGGCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCAAATGAAGCCTCGCTGTTTCCTCCCGTCCCCACCTCTGGCTTT  650

seq1  GACCTCATTATCTTTTCCTTTCAGTGAATTC  681
      |||||||||||||||||||||||||||||||
seq2  GACCTCATTATCTTTTCCTTTCAGTGAATTC  681