BAC Information

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BAC

Clone NameB6Ng01-253I07
Chromosome2 (Build37)
Map Location 159,663,944 - 159,665,110
singlet/doubletsinglet
Overlap genenone
Upstream geneDhx35, LOC100043891, LOC100043689
Downstream geneGm826, Mafb, LOC100043892, Top1, Plcg1, Zhx3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253I07.bB6Ng01-253I07.g
ACCGA060228GA060229
length8321,155
definitionB6Ng01-253I07.b B6Ng01-253I07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagttgtgcctattgtactgctcttgaaatgctaggctgtgtac
cttttccagaacctgagttctgtggttaagttacctttaggttgttctgg
caacaactgtccttcttactactctctcattcttgagtataactattttc
ttaatttttaaaacacttgccacttcttccaggttgtctgtgttctctga
aatcagacacactttatatcagtttagttttcatattgtaaaacgtctgc
tgcagtgtctacatgggagagttaaatgaagaaaagcggaagaacactga
taatagtgttctcaagcacacagagtgcgaccaagggttgaacctagctg
gaatatcttcaccagagctgactgtcagggaacacattactctgtaaagg
aaagccactatctaatcttaaattatatataatcataattaaacaaatta
cttaaaacagaaacaaatacgtacttgactccctacttcttagttgtttt
gctacaggttagattatctgtgaacatgatgtcatttatgtctattttac
atttatgttctaaatgtccactgtgtgtgtgtgtgtgtgtgtgttgtgta
taaaatggtatgtggtaaatggcaatgtgtttcctaacaattgctttcca
actctgcctctgctgacatcatagtgacatgacattagccatggtgggat
tatttcaggaaattcttctcatcctaaaaatattgtgtttttgttccacc
agagaactagttgttgagcatttgctcgtgggtagaaaatcaaaaaaata
aaatgattcccattcctaaagaaacatacctg

gaattcatctctatctatgttctgggtggattcctcatatttccataatg
gacattcagatatttggatcttgccgttttttcacatgtctatttctttt
caacattcacagtctggataatcatatgtcaaggtctgatccaacctgaa
gagggtacgcttcatattctctgtgttatgctgagtctagtctttatgct
gctccctgagtggtaaggtttgtggtggctggaagcagttttaagatatg
ggttcaagtctacatctccattaatgtgctaaggaatctcgggaaaatta
ccctttcttctgtcatcttctcaattttaatatagtctcaagcttagtca
gatctaccttcttggtttgtattgctttgaaaaattagaaaacccgttct
catggacttgtaattgaagccactttctgtctttatgccacaaaagctta
ggggcttgaatgtaaatttggggttactaatatctagaagagggttttct
aggtaaagggggaggggcagagcaatgagcccaaagagtttaagtatgga
cagaacagagaatgtacttgattggcacacaaagaacagagtgaacattg
gttagtaaataggaaggagactactcaaagctatccagttatgcttttac
aaacaaacaaatcttatggcacagaaattatatctcaatatggctgctta
aaagagaacagatggtctgggtcaaaaggaacccatttgtgtaaaaagat
taaggaatcacaaacctggagcaaatactggttataatcaaaatagtttt
tatatctataattttaatagtactcaagcacatgcattgtgtttaataat
ttttaaattattaaattttgaaatgggaggattatgtttcatctttcatg
aaacccttagctaatcccctaagtgaagactttatcaggggaatacaatc
attgaattattttcatgactcagtaaacaccatcccttacattactccac
aaatgggataaaagcaggggttcctagaagtattcagggtacacatcttg
cttttatgcaagaaagatatggaaatagtataggttacggtccctctggt
ggtggtctggaatgcagagatgtggtgcaactgtctcatgaatcgtaaag
acatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_159663944_159665110
seq2: B6Ng01-253I07.g_63_1217

seq1  GAATTCATCTCTATCTATGTTCTGGGTGGATTCCTCATATTTCCATAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTCTATCTATGTTCTGGGTGGATTCCTCATATTTCCATAATG  50

seq1  GACATTCAGATATTTGGATCTTGCCGTTTTTTCACATGTCTATTTCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCAGATATTTGGATCTTGCCGTTTTTTCACATGTCTATTTCTTTT  100

seq1  CAACATTCACAGTCTGGATAATCATATGTCAAGGTCTGATCCAACCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTCACAGTCTGGATAATCATATGTCAAGGTCTGATCCAACCTGAA  150

seq1  GAGGGTACGCTTCATATTCTCTGTGTTATGCTGAGTCTAGTCTTTATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTACGCTTCATATTCTCTGTGTTATGCTGAGTCTAGTCTTTATGCT  200

seq1  GCTCCCTGAGTGGTAAGGTTTGTGGTGGCTGGAAGCAGTTTTAAGATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTGAGTGGTAAGGTTTGTGGTGGCTGGAAGCAGTTTTAAGATATG  250

seq1  GGTTCAAGTCTACATCTCCATTAATGTGCTAAGGAATCTCGGGAAAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAAGTCTACATCTCCATTAATGTGCTAAGGAATCTCGGGAAAATTA  300

seq1  CCCTTTCTTCTGTCATCTTCTCAATTTTAATATAGTCTCAAGCTTAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTTCTGTCATCTTCTCAATTTTAATATAGTCTCAAGCTTAGTCA  350

seq1  GATCTACCTTCTTGGTTTGTATTGCTTTGAAAAATTAGAAAACCCGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTACCTTCTTGGTTTGTATTGCTTTGAAAAATTAGAAAACCCGTTCT  400

seq1  CATGGACTTGTAATTGAAGCCACTTTCTGTCTTTATGCCACAAAAGCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGACTTGTAATTGAAGCCACTTTCTGTCTTTATGCCACAAAAGCTTA  450

seq1  GGGGCTTGAATGTAAATTTGGGGTTACTAATATCTAGAAGAGGGTTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTGAATGTAAATTTGGGGTTACTAATATCTAGAAGAGGGTTTTCT  500

seq1  AGGTAAAGGGGGAGGGGCAGAGCAATGAGCCCAAAGAGTTTAAGTATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAGGGGGAGGGGCAGAGCAATGAGCCCAAAGAGTTTAAGTATGGA  550

seq1  CAGAACAGAGAATGTACTTGATTGGCACACAAAGAACAGAGTGAACATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAGAGAATGTACTTGATTGGCACACAAAGAACAGAGTGAACATTG  600

seq1  GTTAGTAAATAGGAAGGAGACTACTCAAAGCTATCCAGTTATGCTTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTAAATAGGAAGGAGACTACTCAAAGCTATCCAGTTATGCTTTTAC  650

seq1  AAACAAACAAATCTTATGGCACAGAAATTATATCTCAATATGGCTGCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAATCTTATGGCACAGAAATTATATCTCAATATGGCTGCTTA  700

seq1  AAAGAGAACAGATGGTCTGGGTCAAAAGGAACCCATTTGTGTAAAAAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAACAGATGGTCTGGGTCAAAAGGAACCCATTTGTGTAAAAAGAT  750

seq1  TAAGGAATCACAAACCTGGAGCAAATACTGGTTATAATCAAAATAGTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAATCACAAACCTGGAGCAAATACTGGTTATAATCAAAATAGTTTT  800

seq1  TATATCTATAATTTTAATAGTACTCAAAGCACATGCATTGTGTTTAATAA  850
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TATATCTATAATTTTAATAGTACTC-AAGCACATGCATTGTGTTTAATAA  849

seq1  TTTTTAAATTATTAAATTTTGAAATGGGAGGATTATGTTTCATCTTTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAATTATTAAATTTTGAAATGGGAGGATTATGTTTCATCTTTCAT  899

seq1  GAAACCCTTAGCTAATCCCCCTAAGTGAAGACTTTATCAAGGGGAATACA  950
      |||||||||||||||| ||||||||||||||||||||| |||||||||||
seq2  GAAACCCTTAGCTAAT-CCCCTAAGTGAAGACTTTATC-AGGGGAATACA  947

seq1  ATCATTGAA-TATTTTCATGGAACTCAGTAAACACCAATCCTTACATTAC  999
      ||||||||| ||||||||||  |||||||||||||||  |||||||||||
seq2  ATCATTGAATTATTTTCATG--ACTCAGTAAACACCATCCCTTACATTAC  995

seq1  TTCCACAAATGGGAATTAAAAGCAGGGGTTTCTAGAAAGTATTTCCAGGG  1049
       |||||||||||||  |||||||||||||| |||| |||||||  |||||
seq2  -TCCACAAATGGGA--TAAAAGCAGGGGTTCCTAG-AAGTATT--CAGGG  1039

seq1  TACACATCTGCTTTTTATGCAGGAAAGATTATGG-AATAGTATAAGTTAG  1098
      |||||||||   ||||||||| |||||| ||||| ||||||||| |||| 
seq2  TACACATCTTGCTTTTATGCAAGAAAGA-TATGGAAATAGTATAGGTTAC  1088

seq1  GGTCTCTCTGTGTGCTGAGATGGA---CAGAGAT-TGGTGGGTGGCCAAC  1144
      |||| ||||| ||| ||   ||||   ||||||| |||||      ||||
seq2  GGTCCCTCTG-GTGGTGGTCTGGAATGCAGAGATGTGGTG------CAAC  1131

seq1  TGGTCTCATGAATCG-AAAG-CATT  1167
      | ||||||||||||| |||| ||||
seq2  T-GTCTCATGAATCGTAAAGACATT  1155


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