BAC Information

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BAC

Clone NameB6Ng01-254A16
Chromosome2 (Build37)
Map Location 94,245,254 - 94,246,360
singlet/doubletsinglet
Overlap geneTtc17
Upstream geneLOC639658, Cd82, Alx4, Ext2, 2610203E10Rik, Gm1967, Gm1335, LOC620695, Alkbh3, Hsd17b12, E530001K10Rik, Itpa-ps1
Downstream geneApi5, LOC100043259
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254A16.bB6Ng01-254A16.g
ACCGA060613GA060614
length1,1801,134
definitionB6Ng01-254A16.b B6Ng01-254A16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagttcccaggacccacatggcagctcaaactgtctgtaattcta
aggaacctgatacacttttctgacctctatgggcactaagtatgcatatg
gtgcacagacagatactcaagcaaaatattcatacacataaaaataaatc
aatttttaaaagcagttacatgggctataccccacatcgtaagccaaaat
aaacccttcccccattgagtcacttctgtcagggtgcttttcacagcaac
aggaagagactctgctaatcaaaatctcagcataatttttctctgaactt
ataagtcaagtctcaaattgacatttaaaaaaaaaaaagacgaagaactg
gcaagattattctgagagcaaaaagaaaggacaagaggcttgcctgtctt
gaaattgagatatgcaaaacagtggcaattaggacagtatagttttgctt
caaagagcaatgcagcaaaaccatactgtcttaattaccacagtgttaca
agtcttcatggaacagaatgaagatgccagaaacagattggccacatatg
gggacttgacaaaattggtatgtctgattcctgaagaaaacagactattc
aatacattgtggagaaaaattggctttctatacaaaataaattatactcc
tttatcatattatacagatagctataaattccagaacagacgagagacta
aaactcaggaagcaaacttttaagaaaataatataggagattgtccttat
tatttgagagtaagaaacaatgtggttttagacaacatagagacttaata
gtgccatcaaaattaccttaatgggggcctgtggaaacagatcagtcagt
gagaacagtaagaagcaagaccaaaagcctgagttccgtgcccacagaaa
aacacatccatcagtaatcccagggcctgagaagccagaagagacaggtg
aatccctggggttcaccaggtcagtctagccaatgggaatctcagtttaa
tgacaaacctgtcttcaagatagtggaatagactgaagagacatcacatg
atgatgttcactgttgctgtaaatgaaacagtcccatagctcgtatactt
tatgcttgtgttacagaagtggactattgaagattagaggaatttgacac
tgcaagtggccttgaaggtttcaagagtta
gaattcaatgcctcccttcacgcggacctcagcaaaccaccaacagcaat
caaaagatgaaaacagggatggtgcaggatttccaatcttacgttggaaa
ggcagccttactgtatttttctaggggttctgacatttttaaactctcag
ttggaggctaatgaaaattaacttggatcttgaacttaatatccatgaaa
aagaaatcctttaaatcgggagtttgatataaatacactcgaggaaagag
tacactggaaacacaaagtgtgggcattttaaaaattttgtttaggtttg
ctgcattgtgaaatgtctcatcttaaatataaaccatgcgatgtgtttct
acagttaatcaaaaggatcagtttctctctctcgcctttggttaaaacat
gagtcagtatgcttaaattgcaaggggtacacacttcactttttaaatgg
ctcctggacatttcctgattgttgtcaagcgctggaagtcattaagttta
caagattctgtggtgaagcacgcgcgcgagcacgcgcgcacacacacaca
cacacacacacacacacacacacgcacacacacacacacacacacacgca
gtccttaaagcatcagcagtatgaaagcaaatgcagatgcaggcatcaga
aagttatataagaaaagcggtcactcctctgagaaatcagttcaagcata
ggtaatctagtaaactgcaaatgctgagtgccgggctgggtcaaaggaac
taggaagcaatgtaaaatacaccggggaaatgagggcacttaagaactga
atgatgcggggcaccgccaccagaggcatgcatcttctgggcattccttc
agaaaggagcaagaatggggttgtctttaaagagccccctaatgaccttg
gctaacggcacagcctcaaaccaccaacatcgcgaaacaaatcccatcag
tgggagacaagggctggaaggaggccgcattaaaaagaatccatccattc
acttatggccaccctgggctggtcaccgggctgggtacgcgcacactccc
ccggcactgtcaacctgctttttactttcctcggggaagaaggtgggtgg
cccgccggtcctgggtcacatgcggctcccaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_94245254_94246360
seq2: B6Ng01-254A16.g_70_1203

seq1  GAATTCAATGCCTCCCTTCACGCGGACCTCAGCAAACCACCAACAGCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCCTCCCTTCACGCGGACCTCAGCAAACCACCAACAGCAAT  50

seq1  CAAAAGATGAAAACAGGGATGGTGCAGGATTTCCAATCTTACGTTGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGATGAAAACAGGGATGGTGCAGGATTTCCAATCTTACGTTGGAAA  100

seq1  GGCAGCCTTACTGTATTTTTCTAGGGGTTCTGACATTTTTAAACTCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCCTTACTGTATTTTTCTAGGGGTTCTGACATTTTTAAACTCTCAG  150

seq1  TTGGAGGCTAATGAAAATTAACTTGGATCTTGAACTTAATATCCATGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGCTAATGAAAATTAACTTGGATCTTGAACTTAATATCCATGAAA  200

seq1  AAGAAATCCTTTAAATCGGGAGTTTGATATAAATACACTCGAGGAAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATCCTTTAAATCGGGAGTTTGATATAAATACACTCGAGGAAAGAG  250

seq1  TACACTGGAAACACAAAGTGTGGGCATTTTAAAAATTTTGTTTAGGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGGAAACACAAAGTGTGGGCATTTTAAAAATTTTGTTTAGGTTTG  300

seq1  CTGCATTGTGAAATGTCTCATCTTAAATATAAACCATGCGATGTGTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTGTGAAATGTCTCATCTTAAATATAAACCATGCGATGTGTTTCT  350

seq1  ACAGTTAATCAAAAGGATCAGTTTCTCTCTCTCGCCTTTGGTTAAAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTAATCAAAAGGATCAGTTTCTCTCTCTCGCCTTTGGTTAAAACAT  400

seq1  GAGTCAGTATGCTTAAATTGCAAGGGGTACACACTTCACTTTTTAAATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGTATGCTTAAATTGCAAGGGGTACACACTTCACTTTTTAAATGG  450

seq1  CTCCTGGACATTTCCTGATTGTTGTCAAGCGCTGGAAGTCATTAAGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGACATTTCCTGATTGTTGTCAAGCGCTGGAAGTCATTAAGTTTA  500

seq1  CAAGATTCTGTGGTGAAGCACGCGCGCGAGCACGCGCGCACACACACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTCTGTGGTGAAGCACGCGCGCGAGCACGCGCGCACACACACACA  550

seq1  CACACACACACACACACACACACGCACACACACACACACACACACACGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACGCACACACACACACACACACACACGCA  600

seq1  GTCCTTAAAGCATCAGCAGTATGAAAGCAAATGCAGATGCAGGCATCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTAAAGCATCAGCAGTATGAAAGCAAATGCAGATGCAGGCATCAGA  650

seq1  AAGTTATATAAGAAAAGCGGTCACTCCTCTGAGAAATCAGTTCAAGCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATATAAGAAAAGCGGTCACTCCTCTGAGAAATCAGTTCAAGCATA  700

seq1  GGTAATCTAGTAAACTGCAAATGCTGAGTGCCGGGCTGGGTCAAAGGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATCTAGTAAACTGCAAATGCTGAGTGCCGGGCTGGGTCAAAGGAAC  750

seq1  TAGGAAGCAATGTAAAATACACC-GGGAAATGAGGGCACTTAAGAACTGA  799
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAGGAAGCAATGTAAAATACACCGGGGAAATGAGGGCACTTAAGAACTGA  800

seq1  ATGATGC-GGGCACCGCCACCAGAGGCATGCATCTTCT-GGCATTCCTTC  847
      ||||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  ATGATGCGGGGCACCGCCACCAGAGGCATGCATCTTCTGGGCATTCCTTC  850

seq1  AG-AAGGAGCAAGAAT-GGGTTGTCTTTAAAGAG-CCCCTAATGACC-TG  893
      || ||||||||||||| ||||||||||||||||| |||||||||||| ||
seq2  AGAAAGGAGCAAGAATGGGGTTGTCTTTAAAGAGCCCCCTAATGACCTTG  900

seq1  GCTAACGGCACAGCCTCAAACCACC-ACATCGCGAAACAAATCCCATCAG  942
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GCTAACGGCACAGCCTCAAACCACCAACATCGCGAAACAAATCCCATCAG  950

seq1  TGGGAGACAA-GGCTGG-AGGAGG-CGCATTAAAA--GATCCATCCATTC  987
      |||||||||| |||||| |||||| ||||||||||   ||||||||||||
seq2  TGGGAGACAAGGGCTGGAAGGAGGCCGCATTAAAAAGAATCCATCCATTC  1000

seq1  ACTAAT-GCCACCCT-GGCT-GTCACCGGCCTGGG-ACGCGCACACT-CC  1032
      ||| || |||||||| |||| |||||||| ||||| ||||||||||| ||
seq2  ACTTATGGCCACCCTGGGCTGGTCACCGGGCTGGGTACGCGCACACTCCC  1050

seq1  CCGGCACTG-CCACCTGCTTTCTAC-TTCCTCGGGGA--GAGGT-GGTGG  1077
      ||||||||| | ||||||||| ||| |||||||||||   |||| |||||
seq2  CCGGCACTGTCAACCTGCTTTTTACTTTCCTCGGGGAAGAAGGTGGGTGG  1100

seq1  CGCGCGGGTCCTGGTCCA---GCGGCT-CCAAAG  1107
      | ||| ||||||||  ||   |||||| ||||||
seq2  CCCGCCGGTCCTGGGTCACATGCGGCTCCCAAAG  1134