BAC Information

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BAC

Clone NameB6Ng01-255H20
Chromosome2 (Build37)
Map Location 63,763,592 - 63,887,283
singlet/doubletdoublet
Overlap geneFign
Upstream geneKcnh7, EG667257
Downstream geneLOC620544, LOC667291, Grb14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255H20.bB6Ng01-255H20.g
ACCGA061684GA061685
length3591,194
definitionB6Ng01-255H20.b B6Ng01-255H20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,886,919 - 63,887,283)(63,763,592 - 63,764,793)
sequence
agaagaaacatgcaggaatctctctcctattgtgctgctcctggggatca
aacttagttctaggcttggcagcatgcacctttacctgccaagatatcac
atatcctaaagaatttatccaaactggatttatgtgtgtgtgaactacag
ttagtatattttataggctttctaaagcctcctaaagtatttacatgcta
actggtagcatcactgtcatggatgataaattttaagagaaagatttatt
actagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgt
gtgtctgtgtgtctgtgtgtgtgtgtgttaacgtgggtatatgggtgtcc
aagaggtca

gaattcctgacttcctgtagttagtttccaaagagttttgatggggaaat
tagaatacttgaatgagatgagggataagaatagttgacaaagctccgtg
catgcacatttagaataggaaaagaggaccaagggtccagacagggaccc
ttcctttgtgctgtgtgaaagaaacactgcatctgtgactccctgagata
tttttaacaatggcaatcaaatctcactaatatttttaccaactgtagaa
cagcctgttttcataattgattactatctctctgtcttcaacttagcgaa
tcatctacccacagaaacctaccaagcaaccattgctttagaattcccct
gcggcttcttgtttgtgatttgactggttcctggactctgaacccacatg
gaggtccaggccagtaacttccaggagataagtgccaatgatctcacctt
aggtttatcaggcttttaaactcgccaagtggctcacccatttatggcaa
agtttccattttcattggggtttgaggagagagctttcagaggttagagc
aaaactttctgaccaggaggtggagcagattcctttgagaacacaggtcc
aaggctttgagcacaactgtgaacccgtaagtccaatgtgttacctgagt
aacagtgcaggacagaaggattcctttcctttagtcctgagcaatttgct
gagagtttaggtgaaacgtctaataacattacttggctgatgttgtatct
cagtaaaaatgttggctttattaagaaacaaaatctaaaggcatttacca
gcaatgccctccagaggaacacccagaaaattgtttgtttttccagctaa
caaagaaatgagagaaactctttgacatttctgcttggaggaaaaagaaa
aaaaaaaaaaacacacacacacacactttggatactctgatgcatttctt
aaaatccgagtttggagagagacttaagctcaactcagttaacacgcctt
gttcttctcagtgctttaattactgctcgaggggagactaagtttatgct
cttgctcttagctgctttggggtggcagttgtgagtcatctgaacatgtt
cttctgggttcagtctgagaaacgctagcaacaatggcaatccagtcaaa
cctccgaaggtctgaattcagcctgtccagtcaccttccagctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_63886919_63887283
seq2: B6Ng01-255H20.b_47_411 (reverse)

seq1  TGACCTCTTGGACACCCATATACCCACGTTAACACACACACACACAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCTTGGACACCCATATACCCACGTTAACACACACACACACAGACA  50

seq1  CACAGACACACAGACACACAGACACACACACACACACACACACACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACACACAGACACACAGACACACACACACACACACACACACACACA  100

seq1  CACACTAGTAATAAATCTTTCTCTTAAAATTTATCATCCATGACAGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTAGTAATAAATCTTTCTCTTAAAATTTATCATCCATGACAGTGAT  150

seq1  GCTACCAGTTAGCATGTAAATACTTTAGGAGGCTTTAGAAAGCCTATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCAGTTAGCATGTAAATACTTTAGGAGGCTTTAGAAAGCCTATAAA  200

seq1  ATATACTAACTGTAGTTCACACACACATAAATCCAGTTTGGATAAATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTAACTGTAGTTCACACACACATAAATCCAGTTTGGATAAATTCT  250

seq1  TTAGGATATGTGATATCTTGGCAGGTAAAGGTGCATGCTGCCAAGCCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATATGTGATATCTTGGCAGGTAAAGGTGCATGCTGCCAAGCCTAG  300

seq1  AACTAAGTTTGATCCCCAGGAGCAGCACAATAGGAGAGAGATTCCTGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGTTTGATCCCCAGGAGCAGCACAATAGGAGAGAGATTCCTGCAT  350

seq1  GTTTCTTCTGAATTC  365
      |||||||||||||||
seq2  GTTTCTTCTGAATTC  365


seq1: chr2_63763592_63764793
seq2: B6Ng01-255H20.g_66_1259

seq1  GAATTCCTGACTTCCTGTAGTTAGTTTCCAAAGAGTTTTGATGGGGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACTTCCTGTAGTTAGTTTCCAAAGAGTTTTGATGGGGAAAT  50

seq1  TAGAATACTTGAATGAGATGAGGGATAAGAATAGTTGACAAAGCTCCGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATACTTGAATGAGATGAGGGATAAGAATAGTTGACAAAGCTCCGTG  100

seq1  CATGCACATTTAGAATAGGAAAAGAGGACCAAGGGTCCAGACAGGGACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACATTTAGAATAGGAAAAGAGGACCAAGGGTCCAGACAGGGACCC  150

seq1  TTCCTTTGTGCTGTGTGAAAGAAACACTGCATCTGTGACTCCCTGAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGTGCTGTGTGAAAGAAACACTGCATCTGTGACTCCCTGAGATA  200

seq1  TTTTTAACAATGGCAATCAAATCTCACTAATATTTTTACCAACTGTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAACAATGGCAATCAAATCTCACTAATATTTTTACCAACTGTAGAA  250

seq1  CAGCCTGTTTTCATAATTGATTACTATCTCTCTGTCTTCAACTTAGCGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGTTTTCATAATTGATTACTATCTCTCTGTCTTCAACTTAGCGAA  300

seq1  TCATCTACCCACAGAAACCTACCAAGCAACCATTGCTTTAGAATTCCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTACCCACAGAAACCTACCAAGCAACCATTGCTTTAGAATTCCCCT  350

seq1  GCGGCTTCTTGTTTGTGATTTGACTGGTTCCTGGACTCTGAACCCACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTTCTTGTTTGTGATTTGACTGGTTCCTGGACTCTGAACCCACATG  400

seq1  GAGGTCCAGGCCAGTAACTTCCAGGAGATAAGTGCCAATGATCTCACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCAGGCCAGTAACTTCCAGGAGATAAGTGCCAATGATCTCACCTT  450

seq1  AGGTTTATCAGGCTTTTAAACTCGCCAAGTGGCTCACCCATTTATGGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTATCAGGCTTTTAAACTCGCCAAGTGGCTCACCCATTTATGGCAA  500

seq1  AGTTTCCATTTTCATTGGGGTTTGAGGAGAGAGCTTTCAGAGGTTAGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCATTTTCATTGGGGTTTGAGGAGAGAGCTTTCAGAGGTTAGAGC  550

seq1  AAAACTTTCTGACCAGGAGGTGGAGCAGATTCCTTTGAGAACACAGGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTCTGACCAGGAGGTGGAGCAGATTCCTTTGAGAACACAGGTCC  600

seq1  AAGGCTTTGAGCACAACTGTGAACCCGTAAGTCCAATGTGTTACCTGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTTGAGCACAACTGTGAACCCGTAAGTCCAATGTGTTACCTGAGT  650

seq1  AACAGTGCAGGACAGAAGGATTCCTTTCCTTTAGTCCTGAGCAATTTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGCAGGACAGAAGGATTCCTTTCCTTTAGTCCTGAGCAATTTGCT  700

seq1  GAGAGTTTAGGTGAAACGTCTAATAACATTACTTGGCTGATGTTGTATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTTAGGTGAAACGTCTAATAACATTACTTGGCTGATGTTGTATCT  750

seq1  CAGTAAAAATGTTGGCTTTATTAAGAAACAAAATCT-AAGGCATTTACCA  799
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAGTAAAAATGTTGGCTTTATTAAGAAACAAAATCTAAAGGCATTTACCA  800

seq1  GCAATGCCCTCCAGAGGAACACCCAGAAAATTGTTTGTTTTTCCAGCTAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGCCCTCCAGAGGAACACCCAGAAAATTGTTTGTTTTTCCAGCTAA  850

seq1  CAAAGAAATGAGAGAAACTCTTTGACATTTCTGCTTGGAGGAAAAAG-AA  898
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAAAGAAATGAGAGAAACTCTTTGACATTTCTGCTTGGAGGAAAAAGAAA  900

seq1  AAAAAAAAAAACACACACACACACACTTTGGATACTCTGATGCA-TTCTT  947
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAAAAAAAAAACACACACACACACACTTTGGATACTCTGATGCATTTCTT  950

seq1  AAAATCCGAGTTTGGAGAGAGACTTAAGCTCAACTCAGTTAACACGCCTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCGAGTTTGGAGAGAGACTTAAGCTCAACTCAGTTAACACGCCTT  1000

seq1  GTTCTTCTCAGTGCTTTAATTACTGCTCGA-GGGAGACTAAGTTGGTTGC  1046
      |||||||||||||||||||||||||||||| |||||||||||||   |||
seq2  GTTCTTCTCAGTGCTTTAATTACTGCTCGAGGGGAGACTAAGTT-TATGC  1049

seq1  TCCTGGCTCTTAGGCTGCTTGGGGGTGGCAGTTGTTGGAGTCATCCTGAG  1096
      | || ||||||| ||||||| ||||||||||||||  ||||||| |||| 
seq2  T-CTTGCTCTTA-GCTGCTTTGGGGTGGCAGTTGT--GAGTCAT-CTGA-  1093

seq1  ACAATGTTTCTTCTGGG-TCAGTCTGAAGAAACGCTAGCAACAATGGCAA  1145
      || ||| |||||||||| |||||||| |||||||||||||||||||||||
seq2  AC-ATG-TTCTTCTGGGTTCAGTCTG-AGAAACGCTAGCAACAATGGCAA  1140

seq1  TCCCCAAGGCAACACTCCAGAGGGGGTCTAGATTCAG-CTGT-CAGTCAC  1193
      |||   || |||  ||||   |  |||||  |||||| |||| |||||||
seq2  TCC---AGTCAAACCTCC---GAAGGTCTGAATTCAGCCTGTCCAGTCAC  1184

seq1  CTT-CAGCTC  1202
      ||| ||||||
seq2  CTTCCAGCTC  1194


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