BAC Information

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BAC

Clone NameB6Ng01-255J03
Chromosome2 (Build37)
Map Location 41,385,873 - 41,387,016
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC666531, LOC100042629
Downstream geneLOC625094
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255J03.bB6Ng01-255J03.g
ACCGA061746GA061747
length1,0101,122
definitionB6Ng01-255J03.b B6Ng01-255J03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggagaattcagaatgtctgagaagcccctgaaaaaa
tgttcagcatccttaatcatcagagaaatgtaaatcaaaacaaccctgag
attctacctcacaccagtcagaatggctaagatcaaaaattcaggtgaca
gcagatgctggcaaggatgtggagaaagaggaacactcctccattgttgg
tgggattgcaagctggtacaaccactctggaaatcagtctggcggttcct
cagaaatttggacatagtactaccggaggatcccgcaatacctctcctgg
gcatatatatccagaagaggttttaactggtaataaggacacatgctcca
ctatgttcatagcagtcttatttataatagccagacccagaaatgaatcc
acacacctatggtcacttgatctttgtcaagggagctaaaaccatccagt
ggaaaacagacagcattttcaacaaatggtgttggcacaactggcggtta
tcatatagaagaatgtgaattgatcattttttattcgatattttctttat
atatatttcaaatgctatcctgaaagttccctataccctccctctgccct
gctcccctacccacccactcctgcttcttggccctggcattctcctgtac
tggggcatataaggtttgaaataccaaggggcctctcttcctagtgatgg
ccaactaggccatcttctgctacatatgcagctagaggtaggagctctgg
gggtactggttagttcattttgttgttccacctatagggttgcaaccccc
ttcagcttcttgggtgcgttctctagcttctctattgggtgccctgtgtt
ccattttatagatgactgtgagcatccacttctgtatttgccaggcactg
gcatagcctcatttgagacagctatatcaggttcctttcagcaaaatctt
tctggcatatgcaatatgtctgggtttgggtggctgattatggatgtatg
cccgggtggg

gaattcatagatgtaaatttgctggagaagcacaggtttgtcgaagaacc
catttctgtatgtggaaggaagaaagataacttttctcagagaactttac
tttctactatgtaaactataaagtccacgttaatacatatgtttaggtca
cagaagaaaacacaaaatttgccagtatatataacaaaaattgcccagta
taacctcagtggaactgagctctgggaggaactaagacaggggctatgaa
aagatgaagccagctcaccaccccaccaccctcatccagtccatcttctt
acaactcacatagcttccctgaaaactgtaaattcaataggttgtggtct
catcacaaaaacacaactatatttttaataaaaggatgtccatagatatg
ttaccatttagattcttacagtctttatgtaattccatattaaaacaatt
tattctttgctcagtgacttaacattaatttaacaatgatagtggagaag
gagaagcaatcacctgtctgtaccaaggctaactgagaagacatctggct
cctttccagcacagttcttatcccattatcatacaaacaattggagagaa
gcagacactgaaaattaccaagttagcaagtgacactaaacttttaacga
aggaatagggaagtgctaagtcaatgtgtctaatctggagaaaaacatca
agagtgttagcttggcagaaagaaatgacatatgaaatttcaataagcaa
cttcaagataaagtaattgagaaaaaatttaaattatttggatagaaaac
tgagttatactcttattacttacttaattgactcacataggtggtttcac
taacttaatatctttattctaattgttttattgatagtataatcagaaca
attattctctgaggatattgatctaatgtgccacagtggccaagaacaaa
ttagaaaaaaatggaaatatctttatctgtgtatgttgtcatggagatta
ttcaattgatactcagttagttcagagattgtgatctactgtagctcata
aacctagtcgcatcactgccaagagagcccattgacttgcaacctttata
tgcccaggtacaggacgccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_41385873_41387016
seq2: B6Ng01-255J03.g_66_1187

seq1  GAATTCATAGATGTAAATTTGCTGGAGAAGCACAGGTTTGTCGAAGAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGATGTAAATTTGCTGGAGAAGCACAGGTTTGTCGAAGAACC  50

seq1  CATTTCTGTATGTGGAAGGAAGAAAGATAACTTTTCTCAGAGAACTTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGTATGTGGAAGGAAGAAAGATAACTTTTCTCAGAGAACTTTAC  100

seq1  TTTCTACTATGTAAACTATAAAGTCCACGTTAATACATATGTTTAGGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACTATGTAAACTATAAAGTCCACGTTAATACATATGTTTAGGTCA  150

seq1  CAGAAGAAAACACAAAATTTGCCAGTATATATAACAAAAATTGCCCAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAAAACACAAAATTTGCCAGTATATATAACAAAAATTGCCCAGTA  200

seq1  TAACCTCAGTGGAACTGAGCTCTGGGAGGAACTAAGACAGGGGCTATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTCAGTGGAACTGAGCTCTGGGAGGAACTAAGACAGGGGCTATGAA  250

seq1  AAGATGAAGCCAGCTCACCACCCCACCACCCTCATCCAGTCCATCTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAAGCCAGCTCACCACCCCACCACCCTCATCCAGTCCATCTTCTT  300

seq1  ACAACTCACATAGCTTCCCTGAAAACTGTAAATTCAATAGGTTGTGGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTCACATAGCTTCCCTGAAAACTGTAAATTCAATAGGTTGTGGTCT  350

seq1  CATCACAAAAACACAACTATATTTTTAATAAAAGGATGTCCATAGATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAAAAACACAACTATATTTTTAATAAAAGGATGTCCATAGATATG  400

seq1  TTACCATTTAGATTCTTACAGTCTTTATGTAATTCCATATTAAAACAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATTTAGATTCTTACAGTCTTTATGTAATTCCATATTAAAACAATT  450

seq1  TATTCTTTGCTCAGTGACTTAACATTAATTTAACAATGATAGTGGAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTGCTCAGTGACTTAACATTAATTTAACAATGATAGTGGAGAAG  500

seq1  GAGAAGCAATCACCTGTCTGTACCAAGGCTAACTGAGAAGACATCTGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCAATCACCTGTCTGTACCAAGGCTAACTGAGAAGACATCTGGCT  550

seq1  CCTTTCCAGCACAGTTCTTATCCCATTATCATACAAACAATTGGAGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCAGCACAGTTCTTATCCCATTATCATACAAACAATTGGAGAGAA  600

seq1  GCAGACACTGAAAATTACCAAGTTAGCAAGTGACACTAAACTTTTAACGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACACTGAAAATTACCAAGTTAGCAAGTGACACTAAACTTTTAACGA  650

seq1  AGGAATAGGGAAGTGCTAAGTCAATGTGTCTAATCTGGAGAAAAACATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAGGGAAGTGCTAAGTCAATGTGTCTAATCTGGAGAAAAACATCA  700

seq1  AGAGTGTTAGCTTGGCAGAAAGAAATGACATATGAAATTTCAATAAGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTTAGCTTGGCAGAAAGAAATGACATATGAAATTTCAATAAGCAA  750

seq1  CTTCAAGATAAAGTAATTGAGAAAAAATTTAAATTATTTGGATAGAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGATAAAGTAATTGAGAAAAAATTTAAATTATTTGGATAGAAAAC  800

seq1  TGAGTTATACTCTTATTACTTACTTAATTGACTCACATAGGTGGTTTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTATACTCTTATTACTTACTTAATTGACTCACATAGGTGGTTTCAC  850

seq1  TAACTTAATATCTTTATTCTAATTGTTTTATTGATAGTATAATCAGAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TAACTTAATATCTTTATTCTAATTGTTTTATTGATAGTATAATCAGAAC-  899

seq1  AATTATTCTCTGAGGATATTGATCTAATGTGCCACAGTGGCCAAGAAACA  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AATTATTCTCTGAGGATATTGATCTAATGTGCCACAGTGGCCAAG-AACA  948

seq1  AATTAGAAAAAAAATGGAAATATTCTTTAATCTGTGTAATTGTTGTCATG  1000
      |||||| ||||||||||||||| ||||| |||||||||  ||||||||||
seq2  AATTAG-AAAAAAATGGAAATA-TCTTT-ATCTGTGTA--TGTTGTCATG  993

seq1  GAGATTATTCAATTGATTACTTCAGTTAGTTTCAGAGATTGTGAATCTAC  1050
      |||||||||||||||| ||| |||||||| ||||||||||||| ||||||
seq2  GAGATTATTCAATTGA-TAC-TCAGTTAG-TTCAGAGATTGTG-ATCTAC  1039

seq1  TGTAAGCTTCATTAAAACCTAGTCGGCCATCACTGCAAAGAGAGGCCCAT  1100
      ||| ||| ||||  |||||||||||  ||||||||| |||||| ||||||
seq2  TGT-AGC-TCAT--AAACCTAGTCG--CATCACTGCCAAGAGA-GCCCAT  1082

seq1  TGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGG  1144
      | ||||||||| ||||||||||||  |||||||   ||||||||
seq2  T-GACTTGCAACCTTTATATGCCCAGGTACAGG---ACGCCAGG  1122


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