BAC Information

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BAC

Clone NameB6Ng01-256K02
Chromosome2 (Build37)
Map Location 143,595,136 - 143,595,849
singlet/doubletsinglet
Overlap genePcsk2
Upstream geneKif16b, Snrpb2, Otor, LOC668915, LOC668916
Downstream geneBfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1, 4930517K23Rik, LOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik, Polr3f, Rbbp9, Sec23b, Gm561, Dtd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256K02.bB6Ng01-256K02.g
ACCGA062538GA062539
length715184
definitionB6Ng01-256K02.b B6Ng01-256K02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagggaccaaaacatctgtacaaaccagctcacaggcatatatc
ccagagtctttaacaagccctgtgaggcggaaatggtcttttcccttaag
gaggagtcctggcattggtctcacagctgtcctgtcattgacatgagtga
cacctggtcatcttttcatgcatggtgcaatgatttctactctttcaagg
actcagccttgacacctaccaaacttaatcagactccaaaaaagttccgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgttgtggaaactgagaaagctgaa
gtcagaggaataaggagattagtcactggaagttagggaggatgaggaag
aggaggcacagaagccggttggatgaatagtactaaaatatactatatag
gaaaagtcctagtggtccacagcatagaagggaaactacagtccacaata
atttgttatatattttataaagaactgaaagagaagacttcgaagtttcc
caagacaaagaaatgagcatccaaggagatagaagtagtcatcctctgat
ttgattattacacattgtgtatcatcatattcttgtgttaaattactaca
ccacagcccataaatatgtgtggtattatatattaatttcaaatatatat
gtaaagtattagaaacatgatttatgtacatgtatatgaagtatatgtgt
gagatgtatggtatg
atctaacttgctcacggtgcgtgattatttcaatgtgcagttgaatttgg
cgtgcaagtattttattgggaattctgtgttcctgtgtatcagtgtgatg
cttgtctataattattctctcttctctctcttcctcctcctcctcctcac
ttccctcccccaacccccactctgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_143595136_143595849
seq2: B6Ng01-256K02.b_45_759

seq1  GAATTCAAGGGACCAAAACATCTGTACAAACCAGCTCACAGGCATATATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGGACCAAAACATCTGTACAAACCAGCTCACAGGCATATATC  50

seq1  CCAGAGTCTTTAACAAGCCCTGTGAGGCGGAAATGGTCTTTTCCCTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTCTTTAACAAGCCCTGTGAGGCGGAAATGGTCTTTTCCCTTAAG  100

seq1  GAGGAGTCCTGGCATTGGTCTCACAGCTGTCCTGTCATTGACATGAGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGTCCTGGCATTGGTCTCACAGCTGTCCTGTCATTGACATGAGTGA  150

seq1  CACCTGGTCATCTTTTCATGCATGGTGCAATGATTTCTACTCTTTCAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGTCATCTTTTCATGCATGGTGCAATGATTTCTACTCTTTCAAGG  200

seq1  ACTCAGCCTTGACACCTACCAAACTTAATCAGACTCCAAAAAAGTTCCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCCTTGACACCTACCAAACTTAATCAGACTCCAAAAAAGTTCCGT  250

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGGAAACTGAGAAAGCTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGGAAACTGAGAAAGCTGAA  300

seq1  GTCAGAGGAATAAGGAGATTAGTCACTGGAAGTTAGGGAGGATGAGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGGAATAAGGAGATTAGTCACTGGAAGTTAGGGAGGATGAGGAAG  350

seq1  AGGAGGCACAGAAGCCGGTTGGATGAATAGTACTAAAATATACTATATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCACAGAAGCCGGTTGGATGAATAGTACTAAAATATACTATATAG  400

seq1  GAAAAGTCCTAGTGGTCCACAGCATAGAAGGGAAACTACAGTCCACAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTCCTAGTGGTCCACAGCATAGAAGGGAAACTACAGTCCACAATA  450

seq1  ATTTGTTATATATTTTATAAAGAACTGAAAGAGAAGACTTCGAAGTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTATATATTTTATAAAGAACTGAAAGAGAAGACTTCGAAGTTTCC  500

seq1  CAAGACAAAGAAATGAGCATCCAAGGAGATAGAAGTAGTCATCCTCTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAAAGAAATGAGCATCCAAGGAGATAGAAGTAGTCATCCTCTGAT  550

seq1  TTGATTATTACACATTGTGTATCATCATATTCTTGTGTTAAATTACTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTATTACACATTGTGTATCATCATATTCTTGTGTTAAATTACTACA  600

seq1  CCACAGCCCATAAATATGTGTGGTATTATATATTAA-TTCAAATAAATAT  649
      |||||||||||||||||||||||||||||||||||| |||||||| ||||
seq2  CCACAGCCCATAAATATGTGTGGTATTATATATTAATTTCAAATATATAT  650

seq1  GTAAAGTATTAGAAACATGATTTATGTACATGTATATGAAGTATATGTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTATTAGAAACATGATTTATGTACATGTATATGAAGTATATGTGT  700

seq1  GAGATGTATGGTATG  714
      |||||||||||||||
seq2  GAGATGTATGGTATG  715