BAC Information

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BAC

Clone NameB6Ng01-257F08
Chromosome2 (Build37)
Map Location 79,864,758 - 79,865,935
singlet/doubletsinglet
Overlap genePde1a
Upstream geneLOC100040526, Itga4, Cerkl, Neurod1, Ssfa2, Ppp1r1c
Downstream geneLOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027, LOC100040624, LOC100040655
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257F08.bB6Ng01-257F08.g
ACCGA063060GA063061
length1,1731,206
definitionB6Ng01-257F08.b B6Ng01-257F08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaggagtccaggttacttgggactgctagttttcctatggagt
cactctactagttaacttcttccagcctttccctaattcaacaacaggag
tccctgacttcaatccaaaggttgggtgtaagtatctgtgtctgtctcag
acagctagacatgcttggtatgacatttcaagacatttgcaataagataa
actctttaagacaaataaacagaaagcaaaacaaaacaatcatgggagag
actggcttcttctaaacagtagccatttctattaatgatgtcataatgca
actgagggttgtgttgcacatccaggaagccacaccctcccatatctcca
gggtcttttctgctgcttgggacagagctgtttaggttatgatagcaaca
aatctcttctgtttaggaacactttcaaagcaacagcctgaactttatct
tttatccccttctccttcttcatcgggaggcagtagtctgtgtcccctag
ttcctagtaggtgcatcatatgggtcctgtaaaatccacatttgcacaat
tatcacaggaaatcacatgactgtggctttttgtttgcctcttcatctgt
tccagagaaagcttttgtggaaataaagtgcattacacaattcagaaaag
caaaggctttggttttggttttgttttaacccaagtactttcattggcta
gaaactaagagggaacatacttcagggaagaatcatgtaagtgtgtgtca
cctggaaacactatcaactcagaagagaaagctggtaattgcaaacacac
ttatctattttagcttcctgtgaccccctggacttttgcttcttcgccat
gtacctggaatcttcacatttcatgaagattgtttgcaaactaataataa
atcagtgtattacaattttaatttaatatattatatagaagtctacacaa
ttttaagctattactgatcacacagaattatctgcagattttaactgttt
tcattaagtatgaattaaaggtaattctggggaaaaaaatctttttcaga
taaaataagagaaaagactcaagtctggataacaggctgcctacttttgt
gttcaagtgaatactgggcagacagttcccattgaacctcccctcttgtt
acttcctcattaacctcagctgt
gaattcttctgacaaatggagattctccagatatttaaaagttacactca
taagaattttgcaagtcctaggaaataggggtgttgtggtattgcattat
tcttgagaaggtctgctaagagcagaaccccctggtgctagccttcacac
tagggtgtgatatccttacctgtcattaagctgaccctaggcaggactgc
tttatctttactgtaaacatttacctggttcctgtaagtctctttgtagt
cattcctttgttttgtatcaggtaacttcaatgtactttgcctgctgtga
cttcctaccccttttattttctgtactatataagactggtgttcactttg
tgacaatacattcagattctacacaatctcacgtgttggtctgtctgtca
ttcacgccagccaactccttgcccatctgcacccagagacctgttacatg
cagacaagggacccagagggactgcggcactattctagtctcaggttctt
ggacacttccgcaatatcaggtataggttccatcccattgaatgggcctt
aactcaaccaaaaagtggttggttactactgtaacatttgtgccagtata
ttttgcaggaagatcactgttgtagatcaaagtatttgtatctaggtgat
actgatgaatacctgtctcttccaggagcttgcagattagtttagagcac
catcaacagtggtcagtatggatgaagcatctagctgggcacctgctcac
cttctcatgtttgatgacataagtaagcattgttcttagcagcccccaat
tgtacaggcaaatctatattttattagatcatatctttaaaagaactcag
aataatacaggtagccctacagtgttttcattgtaatataacagaactgg
atttttacaaaaggaattaaagaactttatgggcaaagcaattaattacc
accttctagaacttattagctcttaacagatgaaaggcacacagattaaa
agtaattgatttatattatattattattctataacaaacaccctgagtac
tttgaataatcatgaacatggtgtgtgatgtacaaattctttgagaaagc
caatagattatttagctgttgactggaaaggaaaaccgctaaaaaaagtc
tttatttcagctaagaatctctgctgtatgtcctcggaacctctctacaa
ctcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_79864758_79865935
seq2: B6Ng01-257F08.b_50_1222

seq1  GAATTCTCAGGAGTCCAGGTTACTTGGGACTGCTAGTTTTCCTATGGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGAGTCCAGGTTACTTGGGACTGCTAGTTTTCCTATGGAGT  50

seq1  CACTCTACTAGTTAACTTCTTCCAGCCTTTCCCTAATTCAACAACAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTACTAGTTAACTTCTTCCAGCCTTTCCCTAATTCAACAACAGGAG  100

seq1  TCCCTGACTTCAATCCAAAGGTTGGGTGTAAGTATCTGTGTCTGTCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGACTTCAATCCAAAGGTTGGGTGTAAGTATCTGTGTCTGTCTCAG  150

seq1  ACAGCTAGACATGCTTGGTATGACATTTCAAGACATTTGCAATAAGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTAGACATGCTTGGTATGACATTTCAAGACATTTGCAATAAGATAA  200

seq1  ACTCTTTAAGACAAATAAACAGAAAGCAAAACAAAACAATCATGGGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTAAGACAAATAAACAGAAAGCAAAACAAAACAATCATGGGAGAG  250

seq1  ACTGGCTTCTTCTAAACAGTAGCCATTTCTATTAATGATGTCATAATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTTCTTCTAAACAGTAGCCATTTCTATTAATGATGTCATAATGCA  300

seq1  ACTGAGGGTTGTGTTGCACATCCAGGAAGCCACACCCTCCCATATCTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGGTTGTGTTGCACATCCAGGAAGCCACACCCTCCCATATCTCCA  350

seq1  GGGTCTTTTCTGCTGCTTGGGACAGAGCTGTTTAGGTTATGATAGCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTTTCTGCTGCTTGGGACAGAGCTGTTTAGGTTATGATAGCAACA  400

seq1  AATCTCTTCTGTTTAGGAACACTTTCAAAGCAACAGCCTGAACTTTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTTCTGTTTAGGAACACTTTCAAAGCAACAGCCTGAACTTTATCT  450

seq1  TTTATCCCCTTCTCCTTCTTCATCGGGAGGCAGTAGTCTGTGTCCCCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCCCTTCTCCTTCTTCATCGGGAGGCAGTAGTCTGTGTCCCCTAG  500

seq1  TTCCTAGTAGGTGCATCATATGGGTCCTGTAAAATCCACATTTGCACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGTAGGTGCATCATATGGGTCCTGTAAAATCCACATTTGCACAAT  550

seq1  TATCACAGGAAATCACATGACTGTGGCTTTTTGTTTGCCTCTTCATCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACAGGAAATCACATGACTGTGGCTTTTTGTTTGCCTCTTCATCTGT  600

seq1  TCCAGAGAAAGCTTTTGTGGAAATAAAGTGCATTACACAATTCAGAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGAAAGCTTTTGTGGAAATAAAGTGCATTACACAATTCAGAAAAG  650

seq1  CAAAGGCTTTGGTTTTGGTTTTGTTTTAACCCAAGTACTTTCATTGGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCTTTGGTTTTGGTTTTGTTTTAACCCAAGTACTTTCATTGGCTA  700

seq1  GAAACTAAGAGGGAACATACTTCAGGGAAGAATCATGTAAGTGTGTGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAAGAGGGAACATACTTCAGGGAAGAATCATGTAAGTGTGTGTCA  750

seq1  CCTGGAAACACTATCAACTCAGAAGAGAAAGCTGGTAATTGCAAACACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAAACACTATCAACTCAGAAGAGAAAGCTGGTAATTGCAAACACAC  800

seq1  TTATCTATTTTAGCTTCCTGTGACCCCCTGGACTTTTGCTTCTTCGCCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTATTTTAGCTTCCTGTGACCCCCTGGACTTTTGCTTCTTCGCCAT  850

seq1  GTACCTGGAATCTTCACATTTCATGAAGATTGTTTGCAAACTAATAATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTGGAATCTTCACATTTCATGAAGATTGTTTGCAAACTAATAATAA  900

seq1  ATCAGGTGTATTACAATTTTAATTAAATATATTATATAGAAGTCTACACA  950
      |||| ||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATCA-GTGTATTACAATTTTAATTTAATATATTATATAGAAGTCTACACA  949

seq1  ATTTTAAGCTATTACTGATCACACAGAATTATCTGCAGATTTTAAACTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||| 
seq2  ATTTTAAGCTATTACTGATCACACAGAATTATCTGCAGATTTT-AACTG-  997

seq1  TTTTCATTAAGTATGAATTAAAGGTAATTCTTGGGGAAAAAAATCTTTTC  1050
      |||||||||||||||||||||||||||||| |||||||||||||||||| 
seq2  TTTTCATTAAGTATGAATTAAAGGTAATTC-TGGGGAAAAAAATCTTTTT  1046

seq1  AGGATAAAATAAGAGAAAAGACTCAAGGTCTGGGTAACAGGCTGCCTAC-  1099
        |||||||||||||||||||||||| |||||| ||||||||||||||| 
seq2  CAGATAAAATAAGAGAAAAGACTCAA-GTCTGGATAACAGGCTGCCTACT  1095

seq1  TTTGTGTTCAAAGTGATACCTGGGCAGGACAGTCCCCATGGAA-CTCCCC  1148
      ||||||||| ||||||   ||||||| |||||| ||||| ||| ||||||
seq2  TTTGTGTTC-AAGTGAATACTGGGCA-GACAGTTCCCATTGAACCTCCCC  1143

seq1  TC-TGTTACTTCTTCATTTATCCTCAGCTGT  1178
      || ||||||||| ||| ||| ||||||||||
seq2  TCTTGTTACTTCCTCA-TTAACCTCAGCTGT  1173