BAC Information

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BAC

Clone NameB6Ng01-257K05
Chromosome2 (Build37)
Map Location 138,416,791 - 138,417,851
singlet/doubletsinglet
Overlap genenone
Upstream geneBtbd3
Downstream geneLOC628103, C130053K05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257K05.bB6Ng01-257K05.g
ACCGA063285GA063286
length9861,189
definitionB6Ng01-257K05.b B6Ng01-257K05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataccagtaattttttgttgttgaaattgaaacatccatcccaa
aattaatatggaatttcaaatatataattaatgttgaaaaaagatcaaga
gttgtactgtcacatttcctgtcttcaaaaaatatttcaagtgacagtag
ttaaacagcacatgaatttatgttcatacaggcgtgaagacaggcaagga
aagagtagaaatcccagggaaaatgcttttgtgtgcatggccaacctgct
ctatgtcaaggcttccaagataacttactgagagaagaaaaatgtctgta
gaattggtactggaaaaactgaacagccacatgaaagagaatgaggtgag
aatgttactaaccaacatatttaaaacttaagtccacatggatggaagac
ctaagtgtggacctaaacctatagaaaaactggaagaaaatatcgattaa
aaagctccataacaattttttttgacctcacatataaaataaactgttta
tggcagctcctgcttataatcacataactaaaacaaagacaggagatcca
taggacttgctgtagggtggcaagcgattccaccgggctcttcccaggga
tctagcaacagacaccaagcaacaacctgcatcatcatccatcacatgct
gttggcctggcagcctatagagggctgctcactaccccagcccttcactc
tatccctcctttttttctctttgttcccaactgttttcagctggcctgcc
tctctttctttctgtccttctctgtccctgctgttctgcccttgtggctc
tgtctgtttgcctctacccctctctcaaggtccctcacatcccttacttc
caaataagcattcctcataccagatctatcactcagcataatctctcacc
ttggcatggacgcggcaggtaccgccttgctgaaaatctaacttctagtt
gttgagtctctgtatatgagggactctgtcttccca

gaattcatcatctgattcagagctaccaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatattttctctttgctcctactctctctccc
cgctttacttctgatagattgccctgaatttcatctaaaatcctccctgc
cttaaccacttgataacatgtgaaaaggaacaaaagggcttctaacacta
gaaaaaattcaaggccaaacattttccactttacttctgatagactgtct
tgaatttccttagaaagttcaagaccagacttacctcgtaaagctgtact
cactggtactctcgttccccagctgaaaagttctgaattcatacagttga
atccttcttaacagtctgctttacgggaacctttattaccgcgacccgca
gttctggttctggaatgagggatcttccttgcgccagtcccgagtttttt
ctcgtcccggaattcggcaccaattgttattagacgcgttctcacgaccg
gccaggaaagacgcaacaaaccagaatcttctgcggcaaagctttattgc
ttacatcttcaggagccagagtgcaagaagcaagagagcgagaaaacgaa
accccgtccctattaaggagaattatccttcgcctaggacgtgtcactcc
ctgattggctgcagcccatcggccgagttgacgtcacggggaaggcagag
cacatggagtggagaaccaccctcggcacatgcgcagattatttgtttac
cacttagaacacagctgtcagcgccatcttgtaacggcgaatgtgggcgc
agctcccaacatatgattaagttgtttgtgttggacatatactgctgggc
agagggtctaccttagtagtattaacatagcctgtgagactccactgaga
aagataacgtttcttgtagtgcctatcaatgagataattccttaggatgg
gagcctttgtcactccccttcacactagatctgtgcctgaatcatggtag
atcttatctccaatttaatatctaaggcctctttgaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_138416791_138417851
seq2: B6Ng01-257K05.b_44_1099 (reverse)

seq1  TCATGTGCATTTAGGTACTCGTATGTATAAGTCAGAGGACAGCCTTAGTA  50
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  TCATGTGCATTTAGGTACTCGTATGTATAAGTCAGAGGACAGC--TAGTA  48

seq1  ATGACTTTTGAAGTGCATCCACCTTGGGAAGACAGAGTCCCTCATTATAC  100
      |||||                   |||||||||||||||||||| |||||
seq2  ATGAC--NNNNNNNNNNNNNNNNNTGGGAAGACAGAGTCCCTCA-TATAC  95

seq1  AGAGACTCAACAACTAGAAGTTAGATTTTCAGCAAGGCGGTACCTGCCGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTCAACAACTAGAAGTTAGATTTTCAGCAAGGCGGTACCTGCCGC  145

seq1  GTCCATGCCAAGGTGAGAGATTATGCTGAGTGATAGATCTGGTATGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGCCAAGGTGAGAGATTATGCTGAGTGATAGATCTGGTATGAGGA  195

seq1  ATGCTTATTTGGAAGTAAGGGATGTGAGGGACCTTGAGAGAGGGGTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTATTTGGAAGTAAGGGATGTGAGGGACCTTGAGAGAGGGGTAGAG  245

seq1  GCAAACAGACAGAGCCACAAGGGCAGAACAGCAGGGACAGAGAAGGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACAGACAGAGCCACAAGGGCAGAACAGCAGGGACAGAGAAGGACAG  295

seq1  AAAGAAAGAGAGGCAGGCCAGCTGAAAACAGTTGGGAACAAAGAGAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAGAGGCAGGCCAGCTGAAAACAGTTGGGAACAAAGAGAAAAA  345

seq1  AAGGAGGGATAGAGTGAAGGGCTGGGGTAGTGAGCAGCCCTCTATAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGGATAGAGTGAAGGGCTGGGGTAGTGAGCAGCCCTCTATAGGCT  395

seq1  GCCAGGCCAACAGCATGTGATGGATGATGATGCAGGTTGTTGCTTGGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCCAACAGCATGTGATGGATGATGATGCAGGTTGTTGCTTGGTGT  445

seq1  CTGTTGCTAGATCCCTGGGAAGAGCCCGGTGGAATCGCTTGCCACCCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCTAGATCCCTGGGAAGAGCCCGGTGGAATCGCTTGCCACCCTAC  495

seq1  AGCAAGTCCTATGGATCTCCTGTCTTTGTTTTAGTTATGTGATTATAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTCCTATGGATCTCCTGTCTTTGTTTTAGTTATGTGATTATAAGC  545

seq1  AGGAGCTGCCATAAACAGTTTATTTTATATGTGAGGTCAAAAAAAATTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTGCCATAAACAGTTTATTTTATATGTGAGGTCAAAAAAAATTGT  595

seq1  TATGGAGCTTTTTAATCGATATTTTCTTCCAGTTTTTCTATAGGTTTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGCTTTTTAATCGATATTTTCTTCCAGTTTTTCTATAGGTTTAGG  645

seq1  TCCACACTTAGGTCTTCCATCCATGTGGACTTAAGTTTTAAATATGTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACTTAGGTCTTCCATCCATGTGGACTTAAGTTTTAAATATGTTGG  695

seq1  TTAGTAACATTCTCACCTCATTCTCTTTCATGTGGCTGTTCAGTTTTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAACATTCTCACCTCATTCTCTTTCATGTGGCTGTTCAGTTTTTCC  745

seq1  AGTACCAATTCTACAGACATTTTTCTTCTCTCAGTAAGTTATCTTGGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCAATTCTACAGACATTTTTCTTCTCTCAGTAAGTTATCTTGGAAG  795

seq1  CCTTGACATAGAGCAGGTTGGCCATGCACACAAAAGCATTTTCCCTGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACATAGAGCAGGTTGGCCATGCACACAAAAGCATTTTCCCTGGGA  845

seq1  TTTCTACTCTTTCCTTGCCTGTCTTCACGCCTGTATGAACATAAATTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACTCTTTCCTTGCCTGTCTTCACGCCTGTATGAACATAAATTCAT  895

seq1  GTGCTGTTTAACTACTGTCACTTGAAATATTTTTTGAAGACAGGAAATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTTTAACTACTGTCACTTGAAATATTTTTTGAAGACAGGAAATGT  945

seq1  GACAGTACAACTCTTGATCTTTTTTCAACATTAATTATATATTTGAAATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTACAACTCTTGATCTTTTTTCAACATTAATTATATATTTGAAATT  995

seq1  CCATATTAATTTTGGGATGGATGTTTCAATTTCAACAACAAAAAATTACT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTAATTTTGGGATGGATGTTTCAATTTCAACAACAAAAAATTACT  1045

seq1  GGTATGAATTC  1061
      |||||||||||
seq2  GGTATGAATTC  1056


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