BAC Information

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BAC

Clone NameB6Ng01-258A22
Chromosome2 (Build37)
Map Location 80,929,138 - 80,930,291
singlet/doubletsinglet
Overlap genenone
Upstream genePde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027, LOC100040624, LOC100040655
Downstream geneLOC100040704, Zfp804a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258A22.bB6Ng01-258A22.g
ACCGA063593GA063594
length5111,133
definitionB6Ng01-258A22.b B6Ng01-258A22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tctgtttagttccataccccatttcaattggtttattactcttgttatga
tgtctactttcttgaaattttttagtatattttggatgttatcccactgt
cagatatgtagttggtgaaaatattttctcatattgtaggcttctgtttt
gtcagcaaagggctggatacaaaatttaaaaaaatcaatagcccccctat
atataaacaatagacaggctgagaaagaaatcaaggatataagaccctta
acaatagccatgaataatataaaatcttggtgtaactctaaccaagcaac
agaaagacctgcatgataagaatttcaaatcttcaaggccccagggagtt
tgaggtcaggtagggtgggggctgggggcatccacgtggagacagagtgg
gatgaggagggggtgtgggatgtggagcactcagagggtggatggggaag
tgcacggtatagaatatggagtgtaaagaatgaattatttttttttatct
ttgttttctca

gaattcctaaaatgttgatttacataagaactttaatacatcaccagctt
atagatatgtgattagaaggacattccagaaagaacaagctgggcatgat
tgttgaagcttcttaatagtgttgcaataaaagaggcagcatctaggagg
gctttacttctgttgatatcaacactgatataactgagattttcttcagc
atctgtgtttacatttcaggaatggctatatactttgtggggtcccttgt
tcaaaataaggctttcaatgcagcaattgcagaacattaaccaagtacag
ggttatagtgcccatgaaatggcctggctaatagaagaaacagatcagct
atgcatagatttcccacttgcttttaaagacccttttataggtcacataa
attacagctctaagtctgctaatgtacctataaaaactgctaaaacatat
gcagctagttcactttagaagcacacaggcccagtttctaagtgtgttct
tattcttacatattttaggagaaaataatggaacagatgtggctatggtt
tttgcttttctccttcatgaaatattttttggtatgtaaaatcaacaaca
cactgaatggtgaacatgcatatatcctagatacataggtttcaaattca
ttcacagccttttctggtatgttctgggtacttcccagtcttatccacat
cagagggtgcactgttataaatttggtattttgatattcatatatgtttt
ggctgtgctcatatatgttcctagaataggcagtcttatttattcctgca
ataaatgttaatatgtattaaatacccactgcatgtccatagtgctctgc
actcaggcagtgcagtaagactcaacagttattagtatcaacagaaataa
taaaaccactcaagttttatacatttatttttagtttgcttttgttgtcc
atagacagggaatatgctataaatagagaaatgtgtcatgtttttggata
tgaagtctatcacaatatgtcaattttcctagtttatttatacttaatga
gattaaagaaaaatgcaattccctcctcgttctgacatatgatggctaaa
aagcatctaatagaatatgggttgcaagtatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_80929138_80930291
seq2: B6Ng01-258A22.g_65_1197

seq1  GAATTCCTAAAATGTTGATTTACATAAGAACTTTAATACATCACCAGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAAATGTTGATTTACATAAGAACTTTAATACATCACCAGCTT  50

seq1  ATAGATATGTGATTAGAAGGACATTCCAGAAAGAACAAGCTGGGCATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATATGTGATTAGAAGGACATTCCAGAAAGAACAAGCTGGGCATGAT  100

seq1  TGTTGAAGCTTCTTAATAGTGTTGCAATAAAAGAGGCAGCATCTAGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAGCTTCTTAATAGTGTTGCAATAAAAGAGGCAGCATCTAGGAGG  150

seq1  GCTTTACTTCTGTTGATATCAACACTGATATAACTGAGATTTTCTTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACTTCTGTTGATATCAACACTGATATAACTGAGATTTTCTTCAGC  200

seq1  ATCTGTGTTTACATTTCAGGAATGGCTATATACTTTGTGGGGTCCCTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGTTTACATTTCAGGAATGGCTATATACTTTGTGGGGTCCCTTGT  250

seq1  TCAAAATAAGGCTTTCAATGCAGCAATTGCAGAACATTAACCAAGTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAAGGCTTTCAATGCAGCAATTGCAGAACATTAACCAAGTACAG  300

seq1  GGTTATAGTGCCCATGAAATGGCCTGGCTAATAGAAGAAACAGATCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATAGTGCCCATGAAATGGCCTGGCTAATAGAAGAAACAGATCAGCT  350

seq1  ATGCATAGATTTCCCACTTGCTTTTAAAGACCCTTTTATAGGTCACATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAGATTTCCCACTTGCTTTTAAAGACCCTTTTATAGGTCACATAA  400

seq1  ATTACAGCTCTAAGTCTGCTAATGTACCTATAAAAACTGCTAAAACATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGCTCTAAGTCTGCTAATGTACCTATAAAAACTGCTAAAACATAT  450

seq1  GCAGCTAGTTCACTTTAGAAGCACACAGGCCCAGTTTCTAAGTGTGTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTAGTTCACTTTAGAAGCACACAGGCCCAGTTTCTAAGTGTGTTCT  500

seq1  TATTCTTACATATTTTAGGAGAAAATAATGGAACAGATGTGGCTATGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTACATATTTTAGGAGAAAATAATGGAACAGATGTGGCTATGGTT  550

seq1  TTTGCTTTTCTCCTTCATGAAATATTTTTTGGTATGTAAAATCAACAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTTCTCCTTCATGAAATATTTTTTGGTATGTAAAATCAACAACA  600

seq1  CACTGAATGGTGAACATGCATATATCCTAGATACATAGGTTTCAAATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATGGTGAACATGCATATATCCTAGATACATAGGTTTCAAATTCA  650

seq1  TTCACAGCCTTTTCTGGTATGTTCTGGGTACTTCCCAGTCTTATCCACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGCCTTTTCTGGTATGTTCTGGGTACTTCCCAGTCTTATCCACAT  700

seq1  CAGAGGGTGCACTGTTATAAATTTGGTATTTTGATATTCATATATGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGTGCACTGTTATAAATTTGGTATTTTGATATTCATATATGTTTT  750

seq1  GGCTGTGCTCATATATGTTCCTAGAATAGGCAGTCTTATTTATTCCTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGCTCATATATGTTCCTAGAATAGGCAGTCTTATTTATTCCTGCA  800

seq1  ATAAATGTTAATATGTATTAAATACCCACTGCATGTCCATAGTGCTCTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGTTAATATGTATTAAATACCCACTGCATGTCCATAGTGCTCTGC  850

seq1  ACTCAGGCAGTGCAGTAAGACTCAACAGTTATTAGTATCAACAGAAATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGCAGTGCAGTAAGACTCAACAGTTATTAGTATCAACAGAAATAA  900

seq1  TAAAACCACTCAAGTTTTATACATTTATTTTTAGTTTGCTTTTGTTGTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCACTCAAGTTTTATACATTTATTTTTAGTTTGCTTTTGTTGTCC  950

seq1  ATAGACA-GGAATATGCTATAAATAGAGAAATGTGTCATGTTTTTGGATA  999
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACAGGGAATATGCTATAAATAGAGAAATGTGTCATGTTTTTGGATA  1000

seq1  TGAAGTCTTATCACCAATATGTCAATTTTCCTTAAGTTTATTTATAACTT  1049
      ||||||| ||||| ||||||||||||||||||  ||||||||||||   |
seq2  TGAAGTC-TATCA-CAATATGTCAATTTTCCT--AGTTTATTTATA--CT  1044

seq1  TAATGAGATTTAAAAGAAAAATGCCAATTTCCCTCCTCCGTTCTGGAACC  1099
      ||||||||||  ||||||||||||  | ||||||||| |||||||  || 
seq2  TAATGAGATT--AAAGAAAAATGC--AATTCCCTCCT-CGTTCTG--AC-  1086

seq1  AATATGATGGCTTAAAAAAGCATCTAAATTAGAAATAATGGTTGCAAAAG  1149
       |||||||||||  |||||||||||||  ||| ||||  ||||||  |||
seq2  -ATATGATGGCT--AAAAAGCATCTAA--TAG-AATATGGGTTGC--AAG  1128

seq1  TATGT  1154
      |||||
seq2  TATGT  1133


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