BAC Information

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BAC

Clone NameB6Ng01-258D10
Chromosome2 (Build37)
Map Location 89,179,559 - 89,284,112
singlet/doubletdoublet
Overlap geneOlfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240
Upstream geneOlfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232
Downstream geneOlfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258D10.bB6Ng01-258D10.g
ACCGA063709GA063710
length1,183298
definitionB6Ng01-258D10.b B6Ng01-258D10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,179,559 - 89,180,747)(89,283,815 - 89,284,112)
sequence
gaattcttttttagtatcattctaatggcatttttaacctctgcattcct
tacagtgtagataattggatttaacatgggagtgacaagagtgtaaaaca
ctgctatggctttatctgtatgaaaagttgttactggccgcatatatgta
taaatgcatggcacaaagaacaagacaacaacagtgatgtgggagctaca
ggtagagagggcctttttcctccctgcagtgctatgtgtcctcaaggaaa
agagaatgaccgcataggacatcaatagcatcgtgaaggtgatcacaggg
attacaccaccatttgcagcaatgagaagaccaagaaggaaagtgtctgc
acaggccaactgtagtaacgggaaaatgtcacagcagaaatggtccatga
cattggggccacagaaaggaatccagagagtaacgagtatctgtccaaaa
gagtggagaaaacccattatccaacataccccgactaggacacagcaatt
gtggtggttcatccttgtcacatagtgcagaggtctacagatggccacat
agcggtcataggccatgaccacaagaagaacaatctctgaagctcctaag
aaatgttcaacaaaaagttgtatcatgcagccatggaatgagatggtttt
tctctctgacatcaaatctgctagcatcttaggaatgatagaagaggaat
agcatgcatctatcagagataaaaaggccaagaaaaagtacattggggag
ttcaaagtctggctacagactatggtcccgacaatgagcaggtttcctgt
gacagtgacaatgtagatgataagaagcatcaaaagaagaattctctgca
gctgagggttctgagtcagtcccatgaggatgaattcagtcacattcatt
ctgttttcttttgtttaaatgctgctggggagcgctgaagtgaggagtta
gcctggaaaaatattattagagaattgatgagaaatttactttatttttt
agataaaccatcacttcctgcagaaaataaaagaaatctcctctgagtga
aatacatatctagtgaaagtgagtagagcgagctagtatacatttgctat
taagcttgaagcagaatcaatcagcagctaattccaaggaggactgagtt
ggtcacagttacttagaacactatttggggctg
cctaatatgcttagtttcctaatacatagaagtcatttgttgtctcagga
gctatcacacatttgttttcaacactgtaaagctcaacataattttcact
tctattttgatatattttctctatagcttgttcatctgtgtggtttctta
ttttagtgtgtggtttttttttattgaaaattttcatataatatattctg
atcactgatcccctcccctaacttttctcagatccttctacccctctatc
cacctattttaccctcccttcctcccttccttccttccttccttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89179559_89180747
seq2: B6Ng01-258D10.b_41_1223

seq1  GAATTCTTTTTTAGTATCATTCTAATGGCATTTTTAACCTCTGCATTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTAGTATCATTCTAATGGCATTTTTAACCTCTGCATTCCT  50

seq1  TACAGTGTAGATAATTGGATTTAACATGGGAGTGACAAGAGTGTAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGTAGATAATTGGATTTAACATGGGAGTGACAAGAGTGTAAAACA  100

seq1  CTGCTATGGCTTTATCTGTATGAAAAGTTGTTACTGGCCGCATATATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATGGCTTTATCTGTATGAAAAGTTGTTACTGGCCGCATATATGTA  150

seq1  TAAATGCATGGCACAAAGAACAAGACAACAACAGTGATGTGGGAGCTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCATGGCACAAAGAACAAGACAACAACAGTGATGTGGGAGCTACA  200

seq1  GGTAGAGAGGGCCTTTTTCCTCCCTGCAGTGCTATGTGTCCTCAAGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGAGGGCCTTTTTCCTCCCTGCAGTGCTATGTGTCCTCAAGGAAA  250

seq1  AGAGAATGACCGCATAGGACATCAATAGCATCGTGAAGGTGATCACAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGACCGCATAGGACATCAATAGCATCGTGAAGGTGATCACAGGG  300

seq1  ATTACACCACCATTTGCAGCAATGAGAAGACCAAGAAGGAAAGTGTCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACCACCATTTGCAGCAATGAGAAGACCAAGAAGGAAAGTGTCTGC  350

seq1  ACAGGCCAACTGTAGTAACGGGAAAATGTCACAGCAGAAATGGTCCATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCAACTGTAGTAACGGGAAAATGTCACAGCAGAAATGGTCCATGA  400

seq1  CATTGGGGCCACAGAAAGGAATCCAGAGAGTAACGAGTATCTGTCCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGGGCCACAGAAAGGAATCCAGAGAGTAACGAGTATCTGTCCAAAA  450

seq1  GAGTGGAGAAAACCCATTATCCAACATACCCCGACTAGGACACAGCAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGAGAAAACCCATTATCCAACATACCCCGACTAGGACACAGCAATT  500

seq1  GTGGTGGTTCATCCTTGTCACATAGTGCAGAGGTCTACAGATGGCCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGTTCATCCTTGTCACATAGTGCAGAGGTCTACAGATGGCCACAT  550

seq1  AGCGGTCATAGGCCATGACCACAAGAAGAACAATCTCTGAAGCTCCTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGTCATAGGCCATGACCACAAGAAGAACAATCTCTGAAGCTCCTAAG  600

seq1  AAATGTTCAACAAAAAGTTGTATCATGCAGCCATGGAATGAGATGGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTCAACAAAAAGTTGTATCATGCAGCCATGGAATGAGATGGTTTT  650

seq1  TCTCTCTGACATCAAATCTGCTAGCATCTTAGGAATGATAGAAGAGGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGACATCAAATCTGCTAGCATCTTAGGAATGATAGAAGAGGAAT  700

seq1  AGCATGCATCTATCAGAGATAAAAAGGCCAAGAAAAAGTACATTGGGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCATCTATCAGAGATAAAAAGGCCAAGAAAAAGTACATTGGGGAG  750

seq1  TTCAAAGTCTGGCTACAGACTATGGTCCCGACAATGAGCAGGTTTCCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGTCTGGCTACAGACTATGGTCCCGACAATGAGCAGGTTTCCTGT  800

seq1  GACAGTGACAATGTAGATGATAAGAAGCATCAAAAGAAGAATTCTCTGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGACAATGTAGATGATAAGAAGCATCAAAAGAAGAATTCTCTGCA  850

seq1  GCTGAGGGTTCTGAGTCAGTCCCATGAGGATGAATTCAGTCACATTCATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGGTTCTGAGTCAGTCCCATGAGGATGAATTCAGTCACATTCATT  900

seq1  CTGTTTTCTTTTGTTTAAATGCTGCTGGGGAGCGCTGAAGTGAGGAGTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCTTTTGTTTAAATGCTGCTGGGGAGCGCTGAAGTGAGGAGTTA  950

seq1  GCCTGGAAAAAATATTATTAGAGAATTGATGAGAAATTTACTTTA-TTTT  999
      |||||| |||||||||||||||||||||||||||||||||||||| ||||
seq2  GCCTGG-AAAAATATTATTAGAGAATTGATGAGAAATTTACTTTATTTTT  999

seq1  TAGATAAACCATCACTTCCTGCAGGAAAATAAAAGAAATCTCCTCTGAGT  1049
      ||||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  TAGATAAACCATCACTTCCTGCA-GAAAATAAAAGAAATCTCCTCTGAG-  1047

seq1  TGAAATACATATCTAGTTGAAAGTGAGTAAGGAGCGAGCTAAGTATACAT  1099
      |||||||||||||||| ||||||||||||  ||||||||| |||||||||
seq2  TGAAATACATATCTAG-TGAAAGTGAGTA--GAGCGAGCT-AGTATACAT  1093

seq1  TTGCTATAAAGCTTGAGGCAGAATC-ATCAGCAGGGAAATTCCCAAGGAA  1148
      ||||||| |||||||| |||||||| ||||||||  ||  | |||||| |
seq2  TTGCTATTAAGCTTGAAGCAGAATCAATCAGCAGCTAA--TTCCAAGG-A  1140

seq1  GGAGCAGAGTTTGTAACAG-TACCTAGAACACTA--TGGGGCTG  1189
      ||| | ||||| || |||| ||| ||||||||||  ||||||||
seq2  GGA-CTGAGTTGGTCACAGTTACTTAGAACACTATTTGGGGCTG  1183

seq1: chr2_89283815_89284112
seq2: B6Ng01-258D10.g_72_369 (reverse)

seq1  AAGGAAGGAAGGAAGGAAGGAAGGGAGGAAGGGAGGGTAAAATAGGTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGGAGGAAGGGAGGGTAAAATAGGTGGA  50

seq1  TAGAGGGGTAGAAGGATCTGAGAAAAGTTAGGGGAGGGGATCAGTGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGGTAGAAGGATCTGAGAAAAGTTAGGGGAGGGGATCAGTGATCA  100

seq1  GAATATATTATATGAAAATTTTCAATAAAAAAAAACCACACACTAAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATTATATGAAAATTTTCAATAAAAAAAAACCACACACTAAAATA  150

seq1  AGAAACCACACAGATGAACAAGCTATAGAGAAAATATATCAAAATAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCACACAGATGAACAAGCTATAGAGAAAATATATCAAAATAGAAG  200

seq1  TGAAAATTATGTTGAGCTTTACAGTGTTGAAAACAAATGTGTGATAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTATGTTGAGCTTTACAGTGTTGAAAACAAATGTGTGATAGCTC  250

seq1  CTGAGACAACAAATGACTTCTATGTATTAGGAAACTAAGCATATTAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACAACAAATGACTTCTATGTATTAGGAAACTAAGCATATTAGG  298