BAC Information

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BAC

Clone NameB6Ng01-258G05
Chromosome2 (Build37)
Map Location 139,022,690 - 139,023,879
singlet/doubletsinglet
Overlap genenone
Upstream geneBtbd3
Downstream geneLOC628103, C130053K05Rik, LOC100043792, 5430433G21Rik, Tasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258G05.bB6Ng01-258G05.g
ACCGA063838GA063839
length8961,187
definitionB6Ng01-258G05.b B6Ng01-258G05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccaatttttcatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattgactattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtgacct
ttttgtcttatggacggtgtcttttgccttacagaagctttgcagtttta
tgaggtcccatttgttgattctagatcttacagcacaagccattgctgtt
ctattcaggaattttctccctgttcccatactcactgataagtggatatt
agtccagaaacttagaataccctagatacaatttgcaaaacacatgaaac
tcaagaaggatgaagaccaaagtgtggacactttgcccccttttagaatt
gggaacaaaacacccatggaaggagttacagagacaaagtttggagctga
gatgaaaggatggaccatttagagactgccatacccaaggatccatccca
taatcagcctccaaacactgacaccattgcatacactaacaagattttgc
tgaaaggacccagatatagctgtctcttgtgaggctatgccagggcctag
caaacacagaagtggatgctcacagtcagctattgtatggatcacagggc
ccccaatggaggagctagagaaagtacccaaggagctaacggggtctgca
accctataagtggaataacaatatgaactaatcagtaacccccggagctt
gtgtctctagctgcatatgtatcagaagttgacctagtcagccatcattg
gaaagagaggcccattggtcttgcaaactttatatgtctcagtacagggg
aactccagggccaaacagtgggagtaggtgggtaggagagttgtga

gaattcagaacatcctttcttaccttagagcctcagatattccatatctg
ccttacaggtatgtcttcctactggatgaggaaatggtgttagttagcaa
ctgagatgaaagatatatttagcttctcaaaacagacaggtagtttgaat
aaaaatggcccccataattttcacagggagtggcattattgcaggtgtgg
ccatgttagagaaagtgtgttcctcctacctgctaatctggatgtagaac
tctcagctacctcttcagaaccatgtttgcctgtgtaatgccatgcttct
tgccataatgataatggactaggcctctgaagtgtaagtcaggccctatt
aaatgtgttcctttataggatttgctttggtcatggtgtttttcaaaaac
aataaaaacctaactaaggcagtcagtataagaaagtctatagaccccag
aaggcagggagagctatgagccatgctgtagtaactagtgattcataagc
ttttctaaaattttccattgagcatctagatttagaagaaaagtgagccc
gtttgctattaaagtcactttactaaatcagtacatggacattactaaaa
tcactcaagccttcctaagaaaggaagacaaattaaccaatggatgtccc
aaaatgtgctgcctttctgctttggaaattatctcactgacaacagggtt
taggtacttgaatgtaatttcattaaagacttgcaaggatgggagttata
gattaatctcctaaaagacaccaaccatagatgatatcttaaaagccctt
tctcctatacgacaggacaccgagcaatcagatcaatagcttccagccta
aaggttgatagtaaagggctcagaggtgggtttgaggtagaagattgccc
atagatcatgtagaaactcagaacaatgagtctcactgatctgttagaga
agtatctgggtataacaactagtctgaccatcctcgaggacaccagctca
acatcatggcatgaatgaccatatcatggcctctgccatatactgcctca
gcagatttccaattctgttcctaggttgctgtctatatattcagttactg
gaaagtgcattgaattgcaagatgtttggttaatatgcagtcctttatga
ccaatggcaaggtaagccttcagaaaacctacccaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_139022690_139023879
seq2: B6Ng01-258G05.g_67_1253

seq1  GAATTCAGAACATCCTTTCTTACCTTAGAGCCTCAGATATTCCATATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACATCCTTTCTTACCTTAGAGCCTCAGATATTCCATATCTG  50

seq1  CCTTACAGGTATGTCTTCCTACTGGATGAGGAAATGGTGTTAGTTAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACAGGTATGTCTTCCTACTGGATGAGGAAATGGTGTTAGTTAGCAA  100

seq1  CTGAGATGAAAGATATATTTAGCTTCTCAAAACAGACAGGTAGTTTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATGAAAGATATATTTAGCTTCTCAAAACAGACAGGTAGTTTGAAT  150

seq1  AAAAATGGCCCCCATAATTTTCACAGGGAGTGGCATTATTGCAGGTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGCCCCCATAATTTTCACAGGGAGTGGCATTATTGCAGGTGTGG  200

seq1  CCATGTTAGAGAAAGTGTGTTCCTCCTACCTGCTAATCTGGATGTAGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTAGAGAAAGTGTGTTCCTCCTACCTGCTAATCTGGATGTAGAAC  250

seq1  TCTCAGCTACCTCTTCAGAACCATGTTTGCCTGTGTAATGCCATGCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTACCTCTTCAGAACCATGTTTGCCTGTGTAATGCCATGCTTCT  300

seq1  TGCCATAATGATAATGGACTAGGCCTCTGAAGTGTAAGTCAGGCCCTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATAATGATAATGGACTAGGCCTCTGAAGTGTAAGTCAGGCCCTATT  350

seq1  AAATGTGTTCCTTTATAGGATTTGCTTTGGTCATGGTGTTTTTCAAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTTCCTTTATAGGATTTGCTTTGGTCATGGTGTTTTTCAAAAAC  400

seq1  AATAAAAACCTAACTAAGGCAGTCAGTATAAGAAAGTCTATAGACCCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAACCTAACTAAGGCAGTCAGTATAAGAAAGTCTATAGACCCCAG  450

seq1  AAGGCAGGGAGAGCTATGAGCCATGCTGTAGTAACTAGTGATTCATAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGGAGAGCTATGAGCCATGCTGTAGTAACTAGTGATTCATAAGC  500

seq1  TTTTCTAAAATTTTCCATTGAGCATCTAGATTTAGAAGAAAAGTGAGCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAAAATTTTCCATTGAGCATCTAGATTTAGAAGAAAAGTGAGCCC  550

seq1  GTTTGCTATTAAAGTCACTTTACTAAATCAGTACATGGACATTACTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTATTAAAGTCACTTTACTAAATCAGTACATGGACATTACTAAAA  600

seq1  TCACTCAAGCCTTCCTAAGAAAGGAAGACAAATTAACCAATGGATGTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCAAGCCTTCCTAAGAAAGGAAGACAAATTAACCAATGGATGTCCC  650

seq1  AAAATGTGCTGCCTTTCTGCTTTGGAAATTATCTCACTGACAACAGGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGCTGCCTTTCTGCTTTGGAAATTATCTCACTGACAACAGGGTT  700

seq1  TAGGTACTTGAATGTAATTTCATTAAAGACTTGCAAGGATGGGAGTTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTACTTGAATGTAATTTCATTAAAGACTTGCAAGGATGGGAGTTATA  750

seq1  GATTAATCTCCTAAAAGACACCAACCATAGATGATATCTTAAAAGCCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATCTCCTAAAAGACACCAACCATAGATGATATCTTAAAAGCCCTT  800

seq1  TCTCCTATACGACAGGACACCGAGCAATCAGATCAATAGCTTCCAGCCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTATACGACAGGACACCGAGCAATCAGATCAATAGCTTCCAGCCTA  850

seq1  AAGGTTGATAGTAAAGGGCTCAGAGGTGGGTTTGAGGTAGAAGATTGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGATAGTAAAGGGCTCAGAGGTGGGTTTGAGGTAGAAGATTGCCC  900

seq1  ATAGATCATGTAGAAACTCAGAACAATGAGTCTCACTGATCTGTTAGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCATGTAGAAACTCAGAACAATGAGTCTCACTGATCTGTTAGAGA  950

seq1  AGTATCTGGGTATAACAACTAGTCTGACCATCCTCGAGGACACCAGCTCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTGGGTATAACAACTAGTCTGACCATCCTCGAGGACACCAGCTCA  1000

seq1  ACATCATGGCATGAATGACCATATCATGG-CTCTGCCAATTATACTGGCC  1049
      ||||||||||||||||||||||||||||| ||||||||  |||||| |||
seq2  ACATCATGGCATGAATGACCATATCATGGCCTCTGCCA--TATACT-GCC  1047

seq1  TCCAGCAGGGTTTTCCATTCTGTTCCTA-GTTGCTGTC-ATATA-TCAAG  1096
      | ||||| | ||| | |||||||||||| ||||||||| ||||| |||  
seq2  T-CAGCA-GATTTCCAATTCTGTTCCTAGGTTGCTGTCTATATATTCAGT  1095

seq1  TACTGGAAGGTGGCAATG-AGTGGAAGATGTTGGGTAATAAATGCCAGTC  1145
      |||||||| || ||| || | || |||||||| ||| | | ||| |||||
seq2  TACTGGAAAGT-GCATTGAATTGCAAGATGTTTGGTTA-ATATG-CAGTC  1142

seq1  CTCTTATGCCACATGGCAAGTTAAG-CTTCAGAAAACCTACACAAT  1190
      || ||||| |  |||||||| |||| ||||||||||||||| ||||
seq2  CT-TTATGACCAATGGCAAGGTAAGCCTTCAGAAAACCTACCCAAT  1187


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