MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-259D09
Chromosome	2 (Build37)
Map Location	147,140,239 - 147,252,557
singlet/doublet	doublet
Overlap gene	Pax1
Upstream gene	A230067G21Rik, LOC668918, Gm114, Xrn2, Nkx2-4, Nkx2-2, LOC100043816, LOC668919, LOC668920
Downstream gene	LOC640914, A530006G24Rik, LOC100043820, Foxa2, LOC383752, Sstr4, Thbd
Link	Open Mouse BAC browser

Click to get alignment info.

name	A230067G21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241694 MGI:3036245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668918 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668918
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 106 ESTs, 25 Proteins pseudo : _no_value

name	Gm114 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228730 MGI:2684960
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Xrn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24128 MGI:894687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nkx2-4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228731 MGI:97349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nkx2-2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18088 MGI:97347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100043816 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043816
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC668919 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 8 Proteins pseudo : _no_value

name	LOC668920 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668920
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Pax1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18503 MGI:97485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC640914 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:640914
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins pseudo : _no_value

name	A530006G24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381384 MGI:2685849
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 3 Proteins

name	LOC100043820 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Foxa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15376 MGI:1347476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383752 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Sstr4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20608 MGI:105372
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Thbd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21824 MGI:98736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A230067G21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802867 GeneID:241694 MGI:3036245
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A230067G21 gene transcript_id : NM_001033348.2

name	Gm114 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368782 GeneID:228730 MGI:2684960
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 114, (NCBI) transcript_id : NM_001033298.2

name	Xrn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606213 GeneID:24128 MGI:894687
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5'-3' exoribonuclease 2 transcript_id : NM_011917.2

name	Nkx2-4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28202072 GeneID:228731 MGI:97349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NK2 transcription factor related, locus 4 (Drosophila) transcript_id : NM_023504.1

name	Nkx2-2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117647244 GeneID:18088 MGI:97347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NK2 transcription factor related, locus 2 (Drosophila) transcript_id : NM_001077632.1

name	Nkx2-2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117647241 GeneID:18088 MGI:97347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NK2 transcription factor related, locus 2 (Drosophila) transcript_id : NM_010919.2

name	LOC100043816 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250186 GeneID:100043816
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043816 transcript_id : XM_001481082.1

name	Pax1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679208 GeneID:18503 MGI:97485
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired box gene 1 transcript_id : NM_008780.1

name	LOC100043820 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250189 GeneID:100043820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043820 transcript_id : XM_001481084.1

name	Foxa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753897 GeneID:15376 MGI:1347476
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box A2 transcript_id : NM_010446.1

name	Sstr4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032000 GeneID:20608 MGI:105372
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : somatostatin receptor 4 transcript_id : NM_009219.3

name	Thbd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365367 GeneID:21824 MGI:98736
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thrombomodulin transcript_id : NM_009378.2

name	A230067G21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701840 CCDS:CCDS16831.1 GeneID:241694 MGI:3036245
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC241694 protein_id : NP_001028520.1

name	Gm114 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701800 CCDS:CCDS16832.1 GeneID:228730 MGI:2684960
definition	codon_start : 1 product : hypothetical protein LOC228730 protein_id : NP_001028470.1

name	Xrn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606214 GeneID:24128 MGI:894687
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence IC] GO_function : GO:0004534 - 5'-3' exoribonuclease activity [Evidence NAS]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016049 - cell growth [Evidence IGI]; GO:0006310 - DNA recombination [Evidence NAS]; GO:0006281 - DNA repair [Evidence NAS]; GO:0007017 - microtubule-based process [Evidence TAS]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0016070 - RNA metabolism [Evidence IGI]; GO:0007283 - spermatogenesis [Evidence IEP]; GO:0006350 - transcription [Evidence IEA]; GO:0006353 - transcription termination [Evidence IEA] codon_start : 1 product : 5'-3' exoribonuclease 2 protein_id : NP_036047.2

name	Nkx2-4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28202073 CCDS:CCDS16833.1 GeneID:228731 MGI:97349
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : NK2 transcription factor related, locus 4 protein_id : NP_075993.1

name	Nkx2-2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647245 GeneID:18088 MGI:97347
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0048468 - cell development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IDA]; GO:0048665 - neuron fate specification [Evidence IGI]; GO:0045597 - positive regulation of cell differentiation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045595 - regulation of cell differentiation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; Drosophila NK2 transcription factor related, locus 2; homeobox protein Nkx2-2 product : NK2 transcription factor related, locus 2 isoform 2 protein_id : NP_001071100.1

name	Nkx2-2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754860 CCDS:CCDS16834.1 GeneID:18088 MGI:97347
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0048468 - cell development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IDA]; GO:0048665 - neuron fate specification [Evidence IGI]; GO:0045597 - positive regulation of cell differentiation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045595 - regulation of cell differentiation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; Drosophila NK2 transcription factor related, locus 2; homeobox protein Nkx2-2 product : NK2 transcription factor related, locus 2 isoform 1 protein_id : NP_035049.1

name	LOC100043816 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250187 GeneID:100043816
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481132.1

name	Pax1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679209 CCDS:CCDS16835.1 GeneID:18503 MGI:97485
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence TAS] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS] GO_process : GO:0043367 - CD4-positive, alpha beta T cell differentiation [Evidence IMP]; GO:0043374 - CD8-positive, alpha-beta T cell differentiation [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0007389 - pattern specification [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence TAS]; GO:0001501 - skeletal development [Evidence IMP]; GO:0001756 - somitogenesis [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : wavy tail product : paired box gene 1 protein_id : NP_032806.1

name	LOC100043820 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250190 GeneID:100043820
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481134.1

name	Foxa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753898 CCDS:CCDS16836.1 GeneID:15376 MGI:1347476
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0048754 - branching morphogenesis of a tube [Evidence IGI]; GO:0030855 - epithelial cell differentiation [Evidence IGI]; GO:0030324 - lung development [Evidence IGI]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : hepatocyte nuclear factor 3 beta (winged helix transcription factor); hepatocyte nuclear factor-3 beta product : forkhead box A2 protein_id : NP_034576.1

name	Sstr4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49169818 GeneID:20608 MGI:105372
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : somatostatin receptor 4 protein_id : NP_033245.2

name	Thbd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678339 CCDS:CCDS16838.1 GeneID:21824 MGI:98736
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence TAS]; GO:0009790 - embryonic development [Evidence IMP]; GO:0050819 - negative regulation of coagulation [Evidence TAS]; GO:0007565 - pregnancy [Evidence IMP] codon_start : 1 note : snoRNA MBII-339 product : thrombomodulin protein_id : NP_033404.1

name	LOC668920 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668920
definition	number : 1 pseudo : _no_value

name	LOC383752 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383752
definition	number : 1 pseudo : _no_value

name	LOC668918 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250185 GeneID:668918
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 106 ESTs, 25 Proteins product : similar to glyceraldehyde-3-phosphate dehydrogenase pseudo : _no_value transcript_id : XR_034973.1

name	LOC668919 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250188 GeneID:668919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 8 Proteins product : similar to ribosomal protein L21 pseudo : _no_value transcript_id : XR_002266.2

name	LOC640914 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250039 GeneID:640914
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to Hsp90ab1 protein pseudo : _no_value transcript_id : XR_034697.1

name	A530006G24Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149250040 GeneID:381384 MGI:2685849
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 3 Proteins product : RIKEN cDNA A530006G24 gene transcript_id : XR_034699.1

clone name	MSMg01-452E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339K21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-386N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357G16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-463O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120I10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-259D09.b	B6Ng01-259D09.g
ACC	GA064453	GA064454
length	1,102	1,134
definition	B6Ng01-259D09.b	B6Ng01-259D09.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(147,251,454 - 147,252,557)	(147,140,239 - 147,141,398)
sequence	gaattcattgccctaaacaaaagtcctatagtatttgatagaaaaaaact agtatttaattttttttatactcccacattttccctcctctattagggtc ccattttatagctcaggccagtctcaacttcagaatatcagaatcctccc tcctctgcctcttgaatcctgacattattgaatgctgccgttataggtct gtgtcaccacccatatgacttctgattgagaaggtagtttagttggtaaa atatttcttctacaagcattaactgatttttaacaccaaacacacattaa aacaatgtttcttaaatggtggtaagcatggtggtaagctcttaattcca gttctatgagggtggagggaagtgaatgcctagtgctcaatagtcagcca gtcaagccttatcagtaaggtccaggccaaggagagacatctcaaatttt aattaattaattagttaatcaatgcatcaaacaaagaagataagcaatag tgtctgataaaagacactcaatattattctctggcctctacacatacgca cacacacacacacatgcaagcacacaggcatatgcatacacatgtgcaca cacaaacacaaaccatcttctaggccatgccatttggattctctcttgat gttccatgcacacctgtaaaagtaatactcaattctcatatgctattcaa atgcaaaccatgatcaccctgaagctctaaaacagtgattctcaacctgt gggttgggttgcaagccctttggaccaatctaccctttctcatagaggtt ggttaagcatagatattcacattacaattcataatagcagcaaagtcaca gtaatgaagtagcaatggaaagaattttgtggttggggggtcaccacaac atgaggaacttgattaaagggtgcagcattaggaagactgagaaccactg ctctcaacatccaacaataacttgctttcactctcaggttctaacagtca ggtacattgcaaagcccaaattctcactctggaaacttctcagtggtgca acaaagtacagcagatctatgtgaagaaaaaagttgagttcattctttat ac	gaattctctacattattccaaactgggaaaaccccaggtgcctttcagag actgaatgggtaaaggtaccatgggacatccacacaatgacacttttact atttggggcaagtgacaactaaatgtggatgcttggatggaagcttgatg gagctgctctttggatgcttacagagggagcatgggagacagtttcctca gatgctgcacagtctgcaaagctgtctaagtggccgtggcagacagaagt tgttgctgcctggctggagaatcattgcactagcgatgctgagcaggagg tgtttaggagcaggaagtactcagaagcaggaagttcctgggttaggaag agagggcatctttccctggcagggtctctttactgagtcccactagcagg tcccagtgcaaggctgcttgcagagtgaaaatgggcaggtgggatcccag ctctagtgtcataaaggggagcagagaacagtgggttcagagcttagaaa gttaaagtcaacatggatatgctcctctgtagatgctttgagtagcggga taattctgcctgcaacagaagtccagaatgttacttccatttaaagctca tcagtaatttggtggctcttccattggggaactctcactgattccacctt ctgccttgccttcccttttctcctactctcctttcatctcttcctcctcc cttttcatttgtggttcatctagaactgcaaaaaatctttggcttcaatt aatctctgggatagctcagcatcctgccctgcttccactgcatcggatgt tgtcctttctgggatgtttcaagtctgggggacattgacagaacatatct aagcatttcacgccaagattcaaaacatcagactttatctttgggtaaaa atatatgacctcttttagctttagttttcataaatgggaatgagcatatg ggccacatgtgctgtaaattcacaaccgtaggaaagctactggttaaaac ccaatcgcagtactctggactaggtgtgaggagatctcggagaagaaagc atgagactcttggtgaccactcagacccaatatgtggtagtcggatcacg ttaactaaccccaagactggtaggaaggtaagtg
quality values	Open. Hide. 62 25 22 28 62 31 25 47 62 49 62 62 62 62 62 62 62 42 26 62 62 62 59 59 62 62 62 62 62 59 62 43 51 49 43 28 29 33 38 31 36 48 43 54 62 62 62 62 62 62 59 42 49 62 62 62 59 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 54 56 62 62 62 62 62 62 59 62 62 59 59 59 62 54 62 59 59 59 54 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 38 35 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 58 54 58 58 58 58 58 54 54 54 58 54 58 49 58 58 58 54 58 54 58 58 58 54 58 58 58 58 58 58 58 54 39 58 52 58 54 54 58 58 47 51 58 58 49 54 58 53 41 58 54 58 58 54 58 58 58 58 45 41 58 51 50 51 41 34 58 58 58 52 54 46 54 58 58 58 51 58 58 58 58 52 53 53 58 53 51 58 58 51 53 52 58 58 58 53 52 46 49 51 58 58 58 41 51 58 50 39 28 58 58 51 58 50 35 58 54 49 43 51 52 58 38 43 42 50 44 38 58 49 54 58 51 38 54 54 40 40 21 58 58 50 52 53 53 52 51 38 24 50 52 53 42 32 42 52 54 52 54 29 39 49 46 39 39 52 54 51 40 49 53 37 32 46 41 37 49 54 52 51 44 49 52 33 25 29 13 49 51 53 45 31 41 46 49 52 51 42 40 40 37 33 52 45 29 45 34 53 30 26 44 41 32 53 40 52 35 45 31 34 34 39 39 39 35 31 31 45 31 52 32 35 42 32 37 18 25 28 52 32 31 34 34 41 35 45 32 45 32 38 51 35 41 38 30 33 31 25 36 31 32 35 32 31 33 33 27 46 27 45 31 28 33 31 17 30 40 28 37 46 42 30 37 31 26 46 46 31 32 31 42 36 31 22 30 46 46 46 46 46 29 38 30 29 36 31 31 30 25 39 11 25 31 37 21 28 22 30 19 13 44 26 31 30 13 27 46 19 30 48 35 26 32 27 22 22 32 11 9 30 28 32 31 32 36 18 20 15 32 31 31 14 30 30 32 17 10 19 27 34 31 31 31 37 27 35 7 9 16 7 19 17 21 18 30 20 25 32 18 14 29 33 19 26 32 33 48 33 23 20 24 26 27 32 19 8 25 14 22 5 4 21 21 20 28 18 10 12 31 8 19 20 15 15 15 22 33 32 22 24 18 37 24 24 26 30 21 14 40 20 30 16 16 13 19 20 21 25 20 16 12 18 18 47 15 17 27 9 20 27 24 10 5 6 19 9 15 8 24 9 9 25 11 27 21 14 12 24 13 7 20 19 7 5 12 13 17 16 10 7 6 6 6 22 4 6 24 28 28 29 14 3 1 2 8 17 18 7 13 19 13 14 16 9 10 4 17 4 3 4 6 17	Open. Hide. 62 47 51 47 62 62 62 62 59 62 59 36 51 43 28 28 50 50 20 23 31 43 43 54 62 62 62 59 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 54 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 54 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 54 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 58 58 45 52 58 58 58 58 58 58 58 58 58 58 58 58 52 58 54 58 52 58 58 58 54 58 54 54 54 58 54 46 58 54 54 52 58 54 58 54 54 49 58 58 58 52 58 58 58 58 58 53 54 54 58 54 52 53 58 58 54 58 58 58 42 47 58 45 46 58 58 58 51 54 51 46 58 50 58 48 58 54 58 52 42 58 53 52 53 50 47 58 58 42 33 58 47 38 37 45 58 49 49 58 54 51 47 58 50 58 51 50 58 51 53 52 58 58 58 58 58 53 53 52 51 58 50 52 53 53 51 51 58 58 53 58 49 50 37 51 53 49 58 58 50 50 58 43 50 58 51 42 58 58 54 58 49 50 45 39 50 58 51 58 42 58 44 26 50 50 49 40 46 47 51 42 51 52 39 49 54 32 18 54 54 54 54 33 35 53 53 54 49 54 41 39 54 42 40 33 32 51 33 29 35 53 53 52 53 38 42 54 54 37 31 52 39 52 53 42 52 29 53 42 52 40 54 40 53 33 54 46 26 45 42 39 31 29 38 25 31 31 38 34 31 45 39 35 40 35 30 47 31 32 47 32 30 31 32 49 33 33 36 53 53 47 33 28 42 28 51 31 31 27 20 39 43 39 34 43 51 46 46 21 30 13 31 31 45 31 30 30 31 34 51 31 22 23 32 38 37 37 36 35 46 23 32 25 43 48 38 34 28 32 28 30 21 7 33 31 30 25 42 27 20 46 47 38 27 24 43 38 32 18 36 24 32 47 31 27 29 31 30 46 26 24 46 34 28 31 46 46 46 26 31 31 31 30 31 31 31 20 34 31 31 33 48 48 35 33 24 38 33 48 31 27 31 38 48 48 31 31 22 29 44 43 36 25 31 44 31 32 30 25 32 32 24 37 31 31 21 24 9 37 7 28 5 7 20 18 32 21 20 30 32 31 30 16 19 43 17 11 18 9 4 17 17 23 4 7 30 18 22 14 14 33 43 33 24 26 17 16 32 32 17 18 7 6 25 32 26 16 3 25 17 10 9 27 24 20 18 11 28 11 20 15 28 24 24 14 15 13 12 25 3 5 3 10 18 13 13 15 9 27 11 5 19 28 28 7 7 11 6 15 7 20 27 11 20 28 17 9 4 7 11 16 8 5 18 11 7 8 17 14 16 5 7 16 15 9 7 7 6 7 6 7 10 2 3 9 4 5 4 3 4 8 8 7 7 17 3 11 10 11 14 5 8 14 10 8 5 4 3 3 3 5 5 13 3 4 5 22 28 14 14 6 6 6 21 14 7 13 7 3 4 11 8 4 9 6 14 10 7 10 2 4 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_147251454_147252557
seq2: B6Ng01-259D09.b_46_1147 (reverse)

seq1  GTATAAAGAATGAACTCAATTTTTTTTCTTCACATAGATCTGCTGTACTT  50
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  GTATAAAGAATGAACTCAA-CTTTTTTCTTCACATAGATCTGCTGTACTT  49

seq1  TGTTGGCACACTGAGAAGTTTCCAGAGTGAGAATTTGGGCTTTGCAATGT  100
      |||||   ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCACCACTGAGAAGTTTCCAGAGTGAGAATTTGGGCTTTGCAATGT  99

seq1  ACCTGACTGTTAGAACCTGAGAGTGAAAGCAAGTTATTGTTGGATTGTTG  150
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACCTGACTGTTAGAACCTGAGAGTGAAAGCAAGTTATTGTTGGA-TGTTG  148

seq1  AGAGCAGTGGTTCTCAGTCTTCCTAATGCTGCACCCTTTAATCAAGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGTGGTTCTCAGTCTTCCTAATGCTGCACCCTTTAATCAAGTTCC  198

seq1  TCATGTTGTGGTGACCCCCCAACCACAAAATTCTTTCCATTGCTACTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTGTGGTGACCCCCCAACCACAAAATTCTTTCCATTGCTACTTCA  248

seq1  TTACTGTGACTTTGCTGCTATTATGAATTGTAATGTGAATATCTATGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTGACTTTGCTGCTATTATGAATTGTAATGTGAATATCTATGCTT  298

seq1  AACCAACCTCTATGAGAAAGGGTAGATTGGTCCAAAGGGCTTGCAACCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAACCTCTATGAGAAAGGGTAGATTGGTCCAAAGGGCTTGCAACCCA  348

seq1  ACCCACAGGTTGAGAATCACTGTTTTAGAGCTTCAGGGTGATCATGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAGGTTGAGAATCACTGTTTTAGAGCTTCAGGGTGATCATGGTTT  398

seq1  GCATTTGAATAGCATATGAGAATTGAGTATTACTTTTACAGGTGTGCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGAATAGCATATGAGAATTGAGTATTACTTTTACAGGTGTGCATG  448

seq1  GAACATCAAGAGAGAATCCAAATGGCATGGCCTAGAAGATGGTTTGTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCAAGAGAGAATCCAAATGGCATGGCCTAGAAGATGGTTTGTGTT  498

seq1  TGTGTGTGCACATGTGTATGCATATGCCTGTGTGCTTGCATGTGTGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCACATGTGTATGCATATGCCTGTGTGCTTGCATGTGTGTGTG  548

seq1  TGTGTGCGTATGTGTAGAGGCCAGAGAATAATATTGAGTGTCTTTTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCGTATGTGTAGAGGCCAGAGAATAATATTGAGTGTCTTTTATCA  598

seq1  GACACTATTGCTTATCTTCTTTGTTTGATGCATTGATTAACTAATTAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTATTGCTTATCTTCTTTGTTTGATGCATTGATTAACTAATTAATT  648

seq1  AATTAAAATTTGAGATGTCTCTCCTTGGCCTGGACCTTACTGATAAGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAATTTGAGATGTCTCTCCTTGGCCTGGACCTTACTGATAAGGCT  698

seq1  TGACTGGCTGACTATTGAGCACTAGGCATTCACTTCCCTCCACCCTCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGCTGACTATTGAGCACTAGGCATTCACTTCCCTCCACCCTCATA  748

seq1  GAACTGGAATTAAGAGCTTACCACCATGCTTACCACCATTTAAGAAACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGAATTAAGAGCTTACCACCATGCTTACCACCATTTAAGAAACAT  798

seq1  TGTTTTAATGTGTGTTTGGTGTTAAAAATCAGTTAATGCTTGTAGAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAATGTGTGTTTGGTGTTAAAAATCAGTTAATGCTTGTAGAAGAA  848

seq1  ATATTTTACCAACTAAACTACCTTCTCAATCAGAAGTCATATGGGTGGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTACCAACTAAACTACCTTCTCAATCAGAAGTCATATGGGTGGTG  898

seq1  ACACAGACCTATAACGGCAGCATTCAATAATGTCAGGATTCAAGAGGCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACCTATAACGGCAGCATTCAATAATGTCAGGATTCAAGAGGCAG  948

seq1  AGGAGGGAGGATTCTGATATTCTGAAGTTGAGACTGGCCTGAGCTATAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGAGGATTCTGATATTCTGAAGTTGAGACTGGCCTGAGCTATAAA  998

seq1  ATGGGACCCTAATAGAGGAGGGAAAATGTGGGAGTATAAAAAAAATTAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGACCCTAATAGAGGAGGGAAAATGTGGGAGTATAAAAAAAATTAAA  1048

seq1  TACTAGTTTTTTTCTATCAAATACTATAGGACTTTTGTTTAGGGCAATGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTTTTTTTCTATCAAATACTATAGGACTTTTGTTTAGGGCAATGA  1098

seq1  ATTC  1104
      ||||
seq2  ATTC  1102

seq1: chr2_147140239_147141398
seq2: B6Ng01-259D09.g_67_1200

seq1  GAATTCTCTACATTATTCCAAACTGGGAAAACCCCAGGTGCCTTTCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACATTATTCCAAACTGGGAAAACCCCAGGTGCCTTTCAGAG  50

seq1  ACTGAATGGGTAAAGGTACCATGGGACATCCACACAATGACACTTTTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATGGGTAAAGGTACCATGGGACATCCACACAATGACACTTTTACT  100

seq1  ATTTGGGGCAAGTGACAACTAAATGTGGATGCTTGGATGGAAGCTTGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGGCAAGTGACAACTAAATGTGGATGCTTGGATGGAAGCTTGATG  150

seq1  GAGCTGCTCTTTGGATGCTTACAGAGGGAGCATGGGAGACAGTTTCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGCTCTTTGGATGCTTACAGAGGGAGCATGGGAGACAGTTTCCTCA  200

seq1  GATGCTGCACAGTCTGCAAAGCTGTCTAAGTGGCCGTGGCAGACAGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGCACAGTCTGCAAAGCTGTCTAAGTGGCCGTGGCAGACAGAAGT  250

seq1  TGTTGCTGCCTGGCTGGAGAATCATTGCACTAGCGATGCTGAGCAGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTGCCTGGCTGGAGAATCATTGCACTAGCGATGCTGAGCAGGAGG  300

seq1  TGTTTAGGAGCAGGAAGTACTCAGAAGCAGGAAGTTCCTGGGTTAGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGGAGCAGGAAGTACTCAGAAGCAGGAAGTTCCTGGGTTAGGAAG  350

seq1  AGAGGGCATCTTTCCCTGGCAGGGTCTCTTTACTGAGTCCCACTAGCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGCATCTTTCCCTGGCAGGGTCTCTTTACTGAGTCCCACTAGCAGG  400

seq1  TCCCAGTGCAAGGCTGCTTGCAGAGTGAAAATGGGCAGGTGGGATCCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTGCAAGGCTGCTTGCAGAGTGAAAATGGGCAGGTGGGATCCCAG  450

seq1  CTCTAGTGTCATAAAGGGGAGCAGAGAACAGTGGGTTCAGAGCTTAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTGTCATAAAGGGGAGCAGAGAACAGTGGGTTCAGAGCTTAGAAA  500

seq1  GTTAAAGTCAACATGGATATGCTCCTCTGTAGATGCTTTGAGTAGCGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGTCAACATGGATATGCTCCTCTGTAGATGCTTTGAGTAGCGGGA  550

seq1  TAATTCTGCCTGCAACAGAAGTCCAGAATGTTACTTCCATTTAAAGCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTGCCTGCAACAGAAGTCCAGAATGTTACTTCCATTTAAAGCTCA  600

seq1  TCAGTAATTTGGTGGCTCTTCCATTGGGGAACTCTCACTGATTCCACCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAATTTGGTGGCTCTTCCATTGGGGAACTCTCACTGATTCCACCTT  650

seq1  CTGCCTTGCCTTCCCTTTTCTCCTACTCTCCTTTCATCTCTTCCTCCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTGCCTTCCCTTTTCTCCTACTCTCCTTTCATCTCTTCCTCCTCC  700

seq1  CTTTTCATTTGTGGTTCATCTAGAACTGCAAAAAATCTTTGGCTTCAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATTTGTGGTTCATCTAGAACTGCAAAAAATCTTTGGCTTCAATT  750

seq1  AATCTCTGGGATAGCTCAGCATCCTGCCCTGCTTCCACTGCATCGGATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTGGGATAGCTCAGCATCCTGCCCTGCTTCCACTGCATCGGATGT  800

seq1  TGTCCTTTCTGGGATGTTTCAAGTCTGGGGGACATTGACAGAACATATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTTCTGGGATGTTTCAAGTCTGGGGGACATTGACAGAACATATCT  850

seq1  AAGCATTTCACGCCAAGATTCAAAACATCAGACTTTATCTTTGGGTAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTCACGCCAAGATTCAAAACATCAGACTTTATCTTTGGGTAAAA  900

seq1  ATATATGACCTCTTTTAGCTTTAGTTTTCATAAAATGGGAATGAGCATAT  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATATATGACCTCTTTTAGCTTTAGTTTTCAT-AAATGGGAATGAGCATAT  949

seq1  -GGCCACATGTGCTGTAAATTCCACAAACCGTAGGAAAGCTACTGGTTAA  999
       |||||||||||||||||||| ||| ||||||||||||||||||||||  
seq2  GGGCCACATGTGCTGTAAATT-CAC-AACCGTAGGAAAGCTACTGGTT--  995

seq1  AAAACCCAATCGCAGGTAACTCTGGAACTAAGGGTGTGAGGAGATTCTCG  1049
      |||||||||||||||   ||||||| ||||  |||||||||||| |||||
seq2  AAAACCCAATCGCAG--TACTCTGG-ACTA--GGTGTGAGGAGA-TCTCG  1039

seq1  GAGAAGAAAGGCCAATGGAGACTCTTTGGTGACCACTCAGGGACCCACAT  1099
      ||||||||||  ||   ||||||| ||||||||||||||  |||||| ||
seq2  GAGAAGAAAG--CA--TGAGACTC-TTGGTGACCACTCA--GACCCA-AT  1081

seq1  ATGTGGGTAGTCAGATCACGGTTTACCTTACCCCACAAAGACTGGTAGGA  1149
      |||| ||||||| |||||||  ||| || |||||   |||||||||||  
seq2  ATGT-GGTAGTCGGATCACG--TTAACTAACCCC---AAGACTGGTAG--  1123

seq1  GAAGGTAAGTG  1160
      |||||||||||
seq2  GAAGGTAAGTG  1134

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Alignment Information