BAC Information

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BAC

Clone NameB6Ng01-259J12
Chromosome2 (Build37)
Map Location 91,614,413 - 91,749,597
singlet/doubletdoublet
Overlap geneD030051N19Rik
Upstream geneFnbp4, Agbl2, Mtch2, C1qtnf4, Ndufs3, Kbtbd4, Ptpmt1, Cugbp1, LOC279067, Rapsn, Psmc3, Slc39a13, Sfpi1, Mybpc3, Madd, Nr1h3, Acp2, Ddb2, Pacsin3, Zfp289, 1110051M20Rik, Lrp4, LOC619941, Ckap5, F2, Zfp408, Arhgap1, D2Ertd391e, LOC100043179, D230010M03Rik
Downstream geneChrm4, Mdk, Dgkz, Creb3l1, Phf21a, Gyltl1b, Pex16, 1700029I15Rik, Mapk8ip1, Cry2, Slc35c1, LOC100042775, LOC100043205, Chst1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259J12.bB6Ng01-259J12.g
ACCGA064735GA064736
length184156
definitionB6Ng01-259J12.b B6Ng01-259J12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,749,414 - 91,749,597)(91,614,413 - 91,614,568)
sequence
caggctagtctaggctatatgaaactgtatcacaaaataaatgaagagaa
aattaaagatccttctctgatgaagtattgccttgtaacagacactggct
gagaacactagtgatggctgtaggaacaagaagtgggaaagggggttgtt
ttatgttttttgttttgttttgttgttgttgttg
cataggaaagtgttttgctttttttgcttttttttttttttttttttttt
tttttttaatttaccaaacttgtgtttttcgatagtctctgggctactca
tctagggtgtttgtttgtttgtttgtttgttgggtttggtttagttttga
tggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_91749414_91749597
seq2: B6Ng01-259J12.b_52_235 (reverse)

seq1  CAACAACAACAACAAAACAAAACAAAAAACATAAAACAACCCCCTTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAACAAAACAAAACAAAAAACATAAAACAACCCCCTTTCCC  50

seq1  ACTTCTTGTTCCTACAGCCATCACTAGTGTTCTCAGCCAGTGTCTGTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTGTTCCTACAGCCATCACTAGTGTTCTCAGCCAGTGTCTGTTAC  100

seq1  AAGGCAATACTTCATCAGAGAAGGATCTTTAATTTTCTCTTCATTTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAATACTTCATCAGAGAAGGATCTTTAATTTTCTCTTCATTTATTT  150

seq1  TGTGATACAGTTTCATATAGCCTAGACTAGCCTG  184
      ||||||||||||||||||||||||||||||||||
seq2  TGTGATACAGTTTCATATAGCCTAGACTAGCCTG  184

seq1: chr2_91614413_91614568
seq2: B6Ng01-259J12.g_71_226

seq1  CATAGGAAAGTGTTTTGCTTTTTTTGCTTTTTTTTTTTTTTTTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGAAAGTGTTTTGCTTTTTTTGCTTTTTTTTTTTTTTTTTTTTTTT  50

seq1  TTTTTTTAATTTACCAAACTTGTGTTTTTCGATAGTCTCTGGGCTACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAATTTACCAAACTTGTGTTTTTCGATAGTCTCTGGGCTACTCA  100

seq1  TCTAGGGTGTTTGTTTGTTTGTTTGTTTGTTGGGTTTGGTTTAGTTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGGTGTTTGTTTGTTTGTTTGTTTGTTGGGTTTGGTTTAGTTTTGA  150

seq1  TGGTGG  156
      ||||||
seq2  TGGTGG  156