BAC Information

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BAC

Clone NameB6Ng01-262B12
Chromosome2 (Build37)
Map Location 138,266,232 - 138,267,360
singlet/doubletsinglet
Overlap genenone
Upstream geneBtbd3
Downstream geneLOC628103
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262B12.bB6Ng01-262B12.g
ACCGA066600GA066601
length1,1361,194
definitionB6Ng01-262B12.b B6Ng01-262B12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccttccctgagttctatggggatagaaacagcgagtgatggct
gtctgcctttgttacttacttctacagatgaatggcccatttccagtcaa
gatctatggagaggaactgtccaccagctcacccattatgcctttgatcg
tgttaatttccaagcttagctttaaatagttcaatccagtccatcctcaa
ggataatttacatataatttacctaatgataatttacatatattttacct
aattccgacacccattcccctcactcccattgaaaaaattattttcagtt
tccaaagaaaatccaagactacaaagttgcccagattcaatttcctggat
gatatatacctaaattctggtcactgtgaaatacttagagacagagtttc
tgtataggtaaccaaattaatataagtctattatggtggtatagttgtat
gaaaaagagaattctctgccagtggccagagaggcaggaacttcaggtgg
tagcagcaagccaagaaatgtcaagggctagaagctgagaagaaggaagg
actctgctctgttgcaaaggcaacttagtactgatggcactttgagttcg
gatttgttgcttctagagctatgggattaggtaatttcaggaagacaaag
ctactcagattgtggtatttaatgacaatagtcccccaaattaatagagt
attttcttaccctgtgcaatgttattgaatttgctgttagaggtgaaaac
tggtggatcgctcccagatgcctgggttgtctctgtgagcatgtatttgg
aagacgtcgagttaatttatactgtttgtctctatctaatattccgtgga
tccacattctgcttgctgtatggcacagaatagaggtgatactggggagt
tgcctgactgtctcccagcgccgcagccaggcaggtgctgggctttgggg
aagcacagaaataccgttccaggagtggaaaaacagtctgagatggggag
aagccaagctctgggtttccagacccctgtgcacccagtcatctctgggg
gtgccgtatagaggagtggggatgaaggatggggaggcacagactagaat
atttaagcattgatgagtcttcgagggagtttggga

gaattcagtactcactagccccctaggcaagctaggctctaaaaagacca
tggtgattggagccactggtagtaaattttacccctggacgaccgaacga
gccctacagataaacaagaacatagtgacccattccttcctggtgatacc
tgagtgtcctgctcccctcttggggcgcgatctgctaaccaaactaaagg
ctcaagtccaatttacttcagaaggcccacaagtaagctggggaaaagcc
cccgttgcctgccttgtcctcaacacagaggaagagtatcggttgcatga
agagcaacccaaaaatgcagtctcttcaggctggctaactgcgttcccca
atgtctgggcagaacaagcaggaatggggttggctaaacaagtgcctccg
gttgtggtagaacttaaagctgatgccacccccatctcggtaagacaata
ccccatgagcaaggaagctagggagggcatccggcctcatatccagaggt
tgctagaccaaggagttttagtggcctgtcagtccccctggaatacacca
cttctgccggttcgaaaaccagggactaatgactatcgcccggtgcaaga
cctccgggaagttaacaaaagggtcctggacattcaccccacagtcccga
acccatacaatttattaagctctctcccacccgagagaacatggtataca
gtcctggacttaaaagatgccttcttttgcctgtgcttgcaccccaagag
tcagctcctgtttgcctttgaatggagggacccagagggcggacagactg
gtcaactaacctggactaggctaccacaggggttcaaaaattcccccacc
ctgtttgacgaggccctccatcgggatctcgcgccttttcgcgctcgaaa
ccctcagcttaccctactacagtatgtggatgatctcttggtcgtggcgg
cctcgaaggagctgttgtcaccagggaactgagaggctccttacagaact
gagtgacttgggttatcgagtttcgctaaaaggcacaaatctgtcaactg
aggtaacctacctggggtatacccttcgagggggtaaagatggctcacag
aaggctgagaggacctgttatgaatgattccctggctatcatctcagcag
tacgttgagtttctggaaacctgctcgtggccttttgttgtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_138266232_138267360
seq2: B6Ng01-262B12.b_44_1179

seq1  GAATTCTCCTTCCCTGAGTTCTATGGGGATAGAAACAGCGAGTGATGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTCCCTGAGTTCTATGGGGATAGAAACAGCGAGTGATGGCT  50

seq1  GTCTGCCTTTGTTACTTACTTCTACAGATGAATGGCCCATTTCCAGTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCCTTTGTTACTTACTTCTACAGATGAATGGCCCATTTCCAGTCAA  100

seq1  GATCTATGGAGAGGAACTGTCCACCAGCTCACCCATTATGCCTTTGATCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTATGGAGAGGAACTGTCCACCAGCTCACCCATTATGCCTTTGATCG  150

seq1  TGTTAATTTCCAAGCTTAGCTTTAAATAGTTCAATCCAGTCCATCCTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATTTCCAAGCTTAGCTTTAAATAGTTCAATCCAGTCCATCCTCAA  200

seq1  GGATAATTTACATATAATTTACCTAATGATAATTTACATATATTTTACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATTTACATATAATTTACCTAATGATAATTTACATATATTTTACCT  250

seq1  AATTCCGACACCCATTCCCCTCACTCCCATTGAAAAAATTATTTTCAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCGACACCCATTCCCCTCACTCCCATTGAAAAAATTATTTTCAGTT  300

seq1  TCCAAAGAAAATCCAAGACTACAAAGTTGCCCAGATTCAATTTCCTGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGAAAATCCAAGACTACAAAGTTGCCCAGATTCAATTTCCTGGAT  350

seq1  GATATATACCTAAATTCTGGTCACTGTGAAATACTTAGAGACAGAGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATACCTAAATTCTGGTCACTGTGAAATACTTAGAGACAGAGTTTC  400

seq1  TGTATAGGTAACCAAATTAATATAAGTCTATTATGGTGGTATAGTTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGGTAACCAAATTAATATAAGTCTATTATGGTGGTATAGTTGTAT  450

seq1  GAAAAAGAGAATTCTCTGCCAGTGGCCAGAGAGGCAGGAACTTCAGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAGAATTCTCTGCCAGTGGCCAGAGAGGCAGGAACTTCAGGTGG  500

seq1  TAGCAGCAAGCCAAGAAATGTCAAGGGCTAGAAGCTGAGAAGAAGGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCAAGCCAAGAAATGTCAAGGGCTAGAAGCTGAGAAGAAGGAAGG  550

seq1  ACTCTGCTCTGTTGCAAAGGCAACTTAGTACTGATGGCACTTTGAGTTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTCTGTTGCAAAGGCAACTTAGTACTGATGGCACTTTGAGTTCG  600

seq1  GATTTGTTGCTTCTAGAGCTATGGGATTAGGTAATTTCAGGAAGACAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTTGCTTCTAGAGCTATGGGATTAGGTAATTTCAGGAAGACAAAG  650

seq1  CTACTCAGATTGTGGTATTTAATGACAATAGTCCCCCAAATTAATAGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCAGATTGTGGTATTTAATGACAATAGTCCCCCAAATTAATAGAGT  700

seq1  ATTTTCTTACCCTGTGCAATGTTATTGAATTTGCTGTTAGAGGTGAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTACCCTGTGCAATGTTATTGAATTTGCTGTTAGAGGTGAAAAC  750

seq1  TGGTGGATCGCTCCCAGATGCCTGGGTTGTCTCTGTGAGCATGTATTTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGATCGCTCCCAGATGCCTGGGTTGTCTCTGTGAGCATGTATTTGG  800

seq1  AAGACGTCGAGTTAATTTATACTGTTTGTCTCTATCTAATATTCCGTGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGTCGAGTTAATTTATACTGTTTGTCTCTATCTAATATTCCGTGGA  850

seq1  TCCACATTCTGCTTGCTGTATGGCACAGAATAGAGGTGATACTGGGGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATTCTGCTTGCTGTATGGCACAGAATAGAGGTGATACTGGGGAGT  900

seq1  TGCCTGACTGTCTCCCAGCGCCGCAGCCAGGCAGGTGCTGGGCTTTGGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGACTGTCTCCCAGCGCCGCAGCCAGGCAGGTGCTGGGCTTTGGGG  950

seq1  AAGCACAGAAATACCGTTCCAGGAGTGGAAAAACAGTCTGAGATGGGGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAGAAATACCGTTCCAGGAGTGGAAAAACAGTCTGAGATGGGGAG  1000

seq1  AAGCCAAAGCTCT-GGTTTCCAGACCCCTGTGCACCCAGTCATCTCT-GG  1048
      ||||| ||||||| ||||||||||||||||||||||||||||||||| ||
seq2  AAGCC-AAGCTCTGGGTTTCCAGACCCCTGTGCACCCAGTCATCTCTGGG  1049

seq1  GGTGCCGTATAGAGGAGTGGGAATGAAGGATGGG--AGCACAGACTAG-A  1095
      ||||||||||||||||||||| ||||||||||||   ||||||||||| |
seq2  GGTGCCGTATAGAGGAGTGGGGATGAAGGATGGGGAGGCACAGACTAGAA  1099

seq1  TATTTAGGCATTGATGAGTC-TCGA-GGAG-TTGGGA  1129
      |||||| ||||||||||||| |||| |||| ||||||
seq2  TATTTAAGCATTGATGAGTCTTCGAGGGAGTTTGGGA  1136


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