BAC Information

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BAC

Clone NameB6Ng01-262F11
Chromosome2 (Build37)
Map Location 21,101,340 - 21,102,507
singlet/doubletsinglet
Overlap gene4933434I06Rik
Upstream geneLOC667609, Etl4, Arhgap21, LOC433408, LOC675912, C130046B21Rik
Downstream geneThnsl1, Gpr158, LOC637235
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262F11.bB6Ng01-262F11.g
ACCGA066785GA066786
length1,1551,193
definitionB6Ng01-262F11.b B6Ng01-262F11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataagaaaaccttaagatgaattttcaaaaatagtggcattaaa
aacattctcctctaagtatccaagctttttaatgatgtttcaaattttgc
atatgtggaatttttcaaaatgactggtgtaaaaatccagtggaaataac
ataagctatatttctctggtagtttgcagtacctaaccaagctttcctaa
cttaaaatttcatgaaaaaagtaatttatttcttagatatgtgtagattt
gtttcttattttgagttgaaggtacttctaggcacataaatctattgatt
aataagctgagtaatcttataaaaggttactttgggattcataaactcca
tatttacactgtacccagatggaaacagacccgagagcttagtgaaagat
tcacagtaaatcatggaacagatcacagcatcacagtcaggatactgggc
ttgtgcattttgtcctgtccttgggtgactctgctccttttgaatggtgt
gctggaaaactcactttgtttctgcctccctcacccctatccccagtgat
ctttcaggtcctgctactgagctacatccaggccttcagaggagtctttc
tcgaattctccctggagcctttcatgaatcatcttaaattttctcccttt
aaatcaatcttttatcatgcatagttttgtggatactgaaaagatcttga
gttataaataattacaaatagccctgaacccctgagaacacaggcttcaa
atctctggagtttggaagcaacataaaggaaatgctttggagtgtctggg
agtcaggtgccccagtctttgacaggcatggttttctgcactgtattctt
atcgtcactcagggaagaaaaaaacaaaacagaaacaaacaacaaaacaa
agcaagcctcccaaaccatgaatggtgaatgtttttgcttttcaaagtcc
aaaattaatgttcatgtgaaacacgtccacagtgataggatgattgacat
tacgaagacagacccaagttgcagcttctgactttatggtttgtttataa
gtagaactctgacagtggaggagaaaattttctttaggagcagcaaatat
cactattctttcacactgccctacaattttcggtaaacttattctctcat
agtcc

gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
acccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tctttgttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgtttccacttggttgatttcaccccctgagtttgatt
atttccctgccgtctactcctcttgggttgaatttgcttccctttttttt
ctagggcttttagatgtgttgtcaagctgctagtatgtgctgtctcccgt
ttcttcttggaggcactcagcgctatgagtttcccctcttagaaatgctt
tcatgtgttcccatagtttggggtacgtttgtggctacattttcatcaac
tctaaaagtcttaatttcgttctttatttcttcctgacaggtatcattga
gaagagtgtaatccagtatcacgtgattgtggcctcattatatgttgata
tgaagtaccggcctatccaggtgtgtcctggagatagagatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_21101340_21102507
seq2: B6Ng01-262F11.b_44_1198

seq1  GAATTCATAAGAAAACCTTAAGATGAATTTTCAAAAATAGTGGCATTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAGAAAACCTTAAGATGAATTTTCAAAAATAGTGGCATTAAA  50

seq1  AACATTCTCCTCTAAGTATCCAAGCTTTTTAATGATGTTTCAAATTTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCTCCTCTAAGTATCCAAGCTTTTTAATGATGTTTCAAATTTTGC  100

seq1  ATATGTGGAATTTTTCAAAATGACTGGTGTAAAAATCCAGTGGAAATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGGAATTTTTCAAAATGACTGGTGTAAAAATCCAGTGGAAATAAC  150

seq1  ATAAGCTATATTTCTCTGGTAGTTTGCAGTACCTAACCAAGCTTTCCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTATATTTCTCTGGTAGTTTGCAGTACCTAACCAAGCTTTCCTAA  200

seq1  CTTAAAATTTCATGAAAAAAGTAATTTATTTCTTAGATATGTGTAGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATTTCATGAAAAAAGTAATTTATTTCTTAGATATGTGTAGATTT  250

seq1  GTTTCTTATTTTGAGTTGAAGGTACTTCTAGGCACATAAATCTATTGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTATTTTGAGTTGAAGGTACTTCTAGGCACATAAATCTATTGATT  300

seq1  AATAAGCTGAGTAATCTTATAAAAGGTTACTTTGGGATTCATAAACTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCTGAGTAATCTTATAAAAGGTTACTTTGGGATTCATAAACTCCA  350

seq1  TATTTACACTGTACCCAGATGGAAACAGACCCGAGAGCTTAGTGAAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACACTGTACCCAGATGGAAACAGACCCGAGAGCTTAGTGAAAGAT  400

seq1  TCACAGTAAATCATGGAACAGATCACAGCATCACAGTCAGGATACTGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTAAATCATGGAACAGATCACAGCATCACAGTCAGGATACTGGGC  450

seq1  TTGTGCATTTTGTCCTGTCCTTGGGTGACTCTGCTCCTTTTGAATGGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCATTTTGTCCTGTCCTTGGGTGACTCTGCTCCTTTTGAATGGTGT  500

seq1  GCTGGAAAACTCACTTTGTTTCTGCCTCCCTCACCCCTATCCCCAGTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAAACTCACTTTGTTTCTGCCTCCCTCACCCCTATCCCCAGTGAT  550

seq1  CTTTCAGGTCCTGCTACTGAGCTACATCCAGGCCTTCAGAGGAGTCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGGTCCTGCTACTGAGCTACATCCAGGCCTTCAGAGGAGTCTTTC  600

seq1  TCGAATTCTCCCTGGAGCCTTTCATGAATCATCTTAAATTTTCTCCCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAATTCTCCCTGGAGCCTTTCATGAATCATCTTAAATTTTCTCCCTTT  650

seq1  AAATCAATCTTTTATCATGCATAGTTTTGTGGATACTGAAAAGATCTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATCTTTTATCATGCATAGTTTTGTGGATACTGAAAAGATCTTGA  700

seq1  GTTATAAATAATTACAAATAGCCCTGAACCCCTGAGAACACAGGCTTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAATAATTACAAATAGCCCTGAACCCCTGAGAACACAGGCTTCAA  750

seq1  ATCTCTGGAGTTTGGAAGCAACATAAAGGAAATGCTTTGGAGTGTCTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGAGTTTGGAAGCAACATAAAGGAAATGCTTTGGAGTGTCTGGG  800

seq1  AGTCAGGTGCCCCAGTCTTTGACAGGCATGGTTTTCTGCACTGTATTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGTGCCCCAGTCTTTGACAGGCATGGTTTTCTGCACTGTATTCTT  850

seq1  ATCGTCACTCAGGGAAGAAAAAAACAAAACAGAAAACAAACAACAAAACA  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATCGTCACTCAGGGAAGAAAAAAACAAAACAG-AAACAAACAACAAAACA  899

seq1  AAGCAAAGCCTCCCAAACCATGAAATGGTGAATGTTTTTGCTTTTCAAAG  950
      |||| ||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAGC-AAGCCTCCCAAACCATG-AATGGTGAATGTTTTTGCTTTTCAAAG  947

seq1  TCCAAAATTAATGTTCATGTGAAACACGTCCACAGTGATAGGATGATTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAATTAATGTTCATGTGAAACACGTCCACAGTGATAGGATGATTGA  997

seq1  CATTACGGAAGACAGACCCAAGGTGCAGCTTCTGACTTTAATGGTTTGTT  1050
      |||||| ||||||||||||||| |||||||||||||||| ||||||||||
seq2  CATTAC-GAAGACAGACCCAAGTTGCAGCTTCTGACTTT-ATGGTTTGTT  1045

seq1  TATAAGTAGAACTCTGACAGTGGAGGAGAAAATTTTCTCTA-GAGCAAGC  1099
      |||||||||||||||||||||||||||||||||||||| || |||| |||
seq2  TATAAGTAGAACTCTGACAGTGGAGGAGAAAATTTTCTTTAGGAGC-AGC  1094

seq1  AAATAATTCAACTATTCTTTCAACACTGCCCCTAC-ATTTTCGGTGAAAA  1148
      |||||  || ||||||||||| |||||| |||||| |||||||||  |||
seq2  AAATA--TC-ACTATTCTTTC-ACACTG-CCCTACAATTTTCGGT--AAA  1137

seq1  CTTTATTCTCTTCATAGTCC  1168
      | |||||||| |||||||||
seq2  C-TTATTCTC-TCATAGTCC  1155


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