BAC Information

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BAC

Clone NameB6Ng01-262J14
Chromosome2 (Build37)4 (Build37)
Map Location 138,266,294 - 138,266,990137,528,384 - 137,529,470
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneBtbd3
Downstream geneLOC628103
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262J14.bB6Ng01-262J14.g
ACCGA066973GA066974
length7551,093
definitionB6Ng01-262J14.b B6Ng01-262J14.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(138,266,294 - 138,266,990)(137,528,384 - 137,529,470)
sequence
gaattcagtgtcacctggactacatgagactctgtcttatactggggtgg
gggtgggggtgtacttacttctacagatgaatggcccatttccagtcaag
atctatggagaggaactgtccgccagctcacccattatgcctttgatcgt
gttaatttccaagcttagcttgaaatagttcaatccagtccatcctcaag
gataatttacatataatttacctaatgataatttacttatattttaccta
attccgacacccattcccctcactccccttgaaaaaattattttcagttt
ccaaagaaaatccagtactacaaagttgcccagattccatttcctggatg
atatatacctaaattctggtcactgtgaaatacttagagacagactttcc
gtataggtaacctaattaatataagtctattatggtggtatagtggtatg
aaaaagagaattctctgccactggccagagaggcaggaacttcaggtggt
agcttcacgccaaaaaatgtcaagggatacaagctgataagaaggaagga
ctctgctctgttgcaaatgcaacgtaacactgatggcaccttgagttcgg
atttgaagcttctatagctatgggataaggtaacttcaggaagacaaagc
tactcagattgcgtatttagtgacgatagtaccccatactcttagactat
ttcttaccatgtgcactgttattgaatttgctgatagatgcgaaactggt
ggatc
gaattctctcctttgtcagtagatgcccgtggcagttctagcattccagc
aaagccaggggaagaaggatctatcaagattcagagacacacaggccatt
gtcaataaacaaggcatccctaccttctgggtgtggtaccgcaccccttt
agtcccagcatcaggaggcagaggcaggcagatctctgggagttcgaggc
cagcctggtctatatcgtgagttccaggacaatcagagccatgcagtgaa
acactttctccaaagaaaaagcagatttccttccctcacgttttatccca
aagctctggcccttctgaggctaccgtggagggacaatcccacatgggtg
ggctaaagaactgtggtactccacctcctgggccggaaggacagtgtggt
gaagaagtacaggttctgaagtcaggtggttgcattcagatctcagctca
taagccaggcaactggctcgtccctcctcttatctctaatagagtcatta
atctcaccagacttgataatgagcttgtcgagagctcctggtggcaactg
actcatgggtagggcatgtgctcagcatgcacaaggaccccaggttgcaa
aatccgtccgagactaagtgctcacaaaaacaattgagccagctcatctt
ctggcgtaactagatctcacacagtctcaggctggaccccctgctgattg
cccacgaatgtggaccagatttggtgttctcatgaaaggttgggacacca
ctccttgctgattctctccactcctgggcctagaactaaggggaaatata
actgcatcacatggacaagaggtatgtagtgtacggcatggctcccgtgt
gaatctcgcaaagttcatgtactgggaaaccaccacccctccagaaatca
gattaatggcatctaaagggtcgaattgcacaatgatatgatggagtcta
tgcgctcataagaaagcgaaagtcaatgatggtgctcgtagtatatgggt
cagggacatgaactacgctcacattctaccacatggacgaaccggatcta
cttgtgagcaggtacctgtcgagggcatccttgcctgtcagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_138266294_138266990
seq2: B6Ng01-262J14.b_103_796

seq1  TACTTACTTCTACAGATGAATGGCCCATTTCCAGTCAAGATCTATGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACTTCTACAGATGAATGGCCCATTTCCAGTCAAGATCTATGGAGA  50

seq1  GGAACTGTCCACCAGCTCACCCATTATGCCTTTGATCGTGTTAATTTCCA  100
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGTCCGCCAGCTCACCCATTATGCCTTTGATCGTGTTAATTTCCA  100

seq1  AGCTTAGCTTTAAATAGTTCAATCCAGTCCATCCTCAAGGATAATTTACA  150
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGCTTGAAATAGTTCAATCCAGTCCATCCTCAAGGATAATTTACA  150

seq1  TATAATTTACCTAATGATAATTTACATATATTTTACCTAATTCCGACACC  200
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TATAATTTACCTAATGATAATTTACTTATATTTTACCTAATTCCGACACC  200

seq1  CATTCCCCTCACTCCCATTGAAAAAATTATTTTCAGTTTCCAAAGAAAAT  250
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CATTCCCCTCACTCCCCTTGAAAAAATTATTTTCAGTTTCCAAAGAAAAT  250

seq1  CCAAGACTACAAAGTTGCCCAGATTCAATTTCCTGGATGATATATACCTA  300
      |||  ||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCAGTACTACAAAGTTGCCCAGATTCCATTTCCTGGATGATATATACCTA  300

seq1  AATTCTGGTCACTGTGAAATACTTAGAGACAGAGTTTCTGTATAGGTAAC  350
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  AATTCTGGTCACTGTGAAATACTTAGAGACAGACTTTCCGTATAGGTAAC  350

seq1  CAAATTAATATAAGTCTATTATGGTGGTATAGTTGTATGAAAAAGAGAAT  400
      | ||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTAATTAATATAAGTCTATTATGGTGGTATAGTGGTATGAAAAAGAGAAT  400

seq1  TCTCTGCCAGTGGCCAGAGAGGCAGGAACTTCAGGTGGTAGCAGCAAGCC  450
      ||||||||| ||||||||||||||||||||||||||||||||  || |||
seq2  TCTCTGCCACTGGCCAGAGAGGCAGGAACTTCAGGTGGTAGCTTCACGCC  450

seq1  AAGAAATGTCAAGGGCTAGAAGCTGAGAAGAAGGAAGGACTCTGCTCTGT  500
      || |||||||||||| || ||||||| |||||||||||||||||||||||
seq2  AAAAAATGTCAAGGGATACAAGCTGATAAGAAGGAAGGACTCTGCTCTGT  500

seq1  TGCAAAGGCAACTTAGTACTGATGGCACTTTGAGTTCGGATTTGTTGCTT  550
      |||||| ||||| ||  ||||||||||| |||||||||||||||  ||||
seq2  TGCAAATGCAACGTAACACTGATGGCACCTTGAGTTCGGATTTGAAGCTT  550

seq1  CTAGAGCTATGGGATTAGGTAATTTCAGGAAGACAAAGCTACTCAGATTG  600
      ||| ||||||||||| |||||| |||||||||||||||||||||||||||
seq2  CTATAGCTATGGGATAAGGTAACTTCAGGAAGACAAAGCTACTCAGATTG  600

seq1  TGGTATTTAATGACAATAGTCCCCCAAATTAATAGAGTATTTTCTTACCC  650
        ||||||| |||| ||||| ||||| | |  |||| || ||||||||| 
seq2  -CGTATTTAGTGACGATAGTACCCCATACTCTTAGACTA-TTTCTTACCA  648

seq1  TGTGCAATGTTATTGAATTTGCTGTTAGAGGTGAAAACTGGTGGATC  697
      |||||| ||||||||||||||||| |||| | | |||||||||||||
seq2  TGTGCACTGTTATTGAATTTGCTGATAGATGCG-AAACTGGTGGATC  694

seq1: chr4_137528384_137529470
seq2: B6Ng01-262J14.g_66_1158 (reverse)

seq1  GACTGACACGCAAGGTTGCCCTC-ACAGGTACATGCTCACAAGTGTGTAC  49
      |||||||| |||||| ||||||| |||||||| |||||||||||   | |
seq2  GACTGACAGGCAAGGATGCCCTCGACAGGTACCTGCTCACAAGTAGATCC  50

seq1  CGTTTGTCCATGTGTGTCG-ATGTGAGCGTAGTTACATGT-CCTGACCAT  97
       ||| ||||||||| || | |||||||||||||| ||||| |||||||  
seq2  GGTTCGTCCATGTG-GTAGAATGTGAGCGTAGTT-CATGTCCCTGACCCA  98

seq1  TATACTACGAGCACCATCATTGACTTTTGCTTTCTTATGAGAGCATCGAC  147
      ||||||||||||||||||||||||||| ||||||||||||| |||| |||
seq2  TATACTACGAGCACCATCATTGACTTTCGCTTTCTTATGAGCGCATAGAC  148

seq1  TCC-TCATTTCTTTGTGCAA-TCCACCCTTTAGATGCCATTAATCTGATT  195
      ||| |||| || |||||||| || ||||||||||||||||||||||||||
seq2  TCCATCATATCATTGTGCAATTCGACCCTTTAGATGCCATTAATCTGATT  198

seq1  TCTGGGGGGGTGGTGGTTT-CCAGTACATGAACTTTG-GGGGTTCACACT  243
      ||||| ||||||||||||| ||||||||||||||||| | | ||||||| 
seq2  TCTGGAGGGGTGGTGGTTTCCCAGTACATGAACTTTGCGAGATTCACACG  248

seq1  GGAGCCATGCCGTACACTACATACCTCTTGTCCATTTGCTGCAGTTATAT  293
      ||||||||||||||||||||||||||||||||||| || |||||||||||
seq2  GGAGCCATGCCGTACACTACATACCTCTTGTCCATGTGATGCAGTTATAT  298

seq1  TTCCCCTTAGTTCTAGG-CCAGGAGTGGAGAGAATCAGCAAGGAGTGGTG  342
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTCCCCTTAGTTCTAGGCCCAGGAGTGGAGAGAATCAGCAAGGAGTGGTG  348

seq1  TCCCAACCTTTCCTGAGAACCCCAAATCTGGTCCACCTTCGTGGGCAATC  392
      |||||||||||| ||||||| ||||||||||||||| |||||||||||||
seq2  TCCCAACCTTTCATGAGAACACCAAATCTGGTCCACATTCGTGGGCAATC  398

seq1  AGCAGGGGGTCCAGCCTGAGACTGTGTGAGATCTAGTTACGCCAGAAGAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGGGTCCAGCCTGAGACTGTGTGAGATCTAGTTACGCCAGAAGAT  448

seq1  GAGCTGGCTCAATTGTTTTTGTGAGCACTTAGTCTCGGACGGATTTTGCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGCTCAATTGTTTTTGTGAGCACTTAGTCTCGGACGGATTTTGCA  498

seq1  ACCTGGGGTCCTTGTGCATGCTGAGCACATGCCCTACCCATGAGTCAGTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGGTCCTTGTGCATGCTGAGCACATGCCCTACCCATGAGTCAGTT  548

seq1  GCCACCAGGAGCTCTCGACAAGCTCATTATCAAGTCTGGTGAGATTAATG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAGGAGCTCTCGACAAGCTCATTATCAAGTCTGGTGAGATTAATG  598

seq1  ACTCTATTAGAGATAAGAGGAGGGACGAGCCAGTTGCCTGGCTTATGAGC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATTAGAGATAAGAGGAGGGACGAGCCAGTTGCCTGGCTTATGAGC  648

seq1  TGAGATCTGAATGCAACCACCTGACTTCAGAACCTGTACTTCTTCACCAC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCTGAATGCAACCACCTGACTTCAGAACCTGTACTTCTTCACCAC  698

seq1  ACTGTCCTTCCGGCCCAGGAGGTGGAGTACCACAGTTCTTTAGCCCACCC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCTTCCGGCCCAGGAGGTGGAGTACCACAGTTCTTTAGCCCACCC  748

seq1  ATGTGGGATTGTCCCTCCACGGTAGCCTCAGAAGGGCCAGAGCTCTGGGA  792
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATGTGGGATTGTCCCTCCACGGTAGCCTCAGAAGGGCCAGAGCTTTGGGA  798

seq1  TAAAACGTGAGGGAAGGAAATCTGCTTTTTCTTTGGAGAAAGTGTTTCAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACGTGAGGGAAGGAAATCTGCTTTTTCTTTGGAGAAAGTGTTTCAC  848

seq1  TGCATGGCTCTGATTGTCCTGGAACTCACGATATAGACCAGGCTGGCCTC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGCTCTGATTGTCCTGGAACTCACGATATAGACCAGGCTGGCCTC  898

seq1  GAACTCCCAGAGATCTGCCTGCCTCTGCCTCCTGATGCTGGGACTAAAGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCCAGAGATCTGCCTGCCTCTGCCTCCTGATGCTGGGACTAAAGG  948

seq1  GGTGCGGTACCACACCCAGAAGGTAGGGATGCCTTGTTTATTGACAATGG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCGGTACCACACCCAGAAGGTAGGGATGCCTTGTTTATTGACAATGG  998

seq1  CCTGTGTGTCTCTGAATCTTGATAGATCCTTCTTCCCCTGGCTTTGCTGG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGTCTCTGAATCTTGATAGATCCTTCTTCCCCTGGCTTTGCTGG  1048

seq1  AATGCTAGAACTGCCACGGGCATCTACTGACAAAGGAGAGAATTC  1087
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAGAACTGCCACGGGCATCTACTGACAAAGGAGAGAATTC  1093