BAC Information

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BAC

Clone NameB6Ng01-263C13
Chromosome2 (Build37)
Map Location 131,036,243 - 131,037,420
singlet/doubletsinglet
Overlap gene2310035K24Rik
Upstream geneTmc2, Nol5a, Idh3b, Ebf4, LOC668899, Cpxm1, LOC100043446, 1700020A23Rik, 4933425O20Rik, A930025D01Rik, Vps16, Ptpra, Mrps26, Oxt, Avp, 1700012O15Rik, Ubox5, Fastkd5, Prosapip1, 2600009E05Rik, Itpa, Slc4a11, 4930402H24Rik, LOC100043766, C030014O09Rik, LOC627316, Atrn, LOC100043768, Gfra4, Adam33, Siglec1, LOC100043457, Hspa12b, 1700037H04Rik, Spef1, Cenpb, Cdc25b
Downstream geneD430028G21Rik, Pank2, Rnf24, LOC100043463, Smox, Adra1d, Lamr1-ps1, Prnp, Prnd, Rassf2, Slc23a2, LOC626513, LOC100043470
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263C13.bB6Ng01-263C13.g
ACCGA067396GA067397
length1,2321,166
definitionB6Ng01-263C13.b B6Ng01-263C13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaagctcacaacattcccagttttctctgcctcatgcttgtgg
atcagatgtaagctctcagctactgctccagtaccatgcctgcctgcctg
cctgctgccatgttccccaccatgatgggcatggactctaaccctctggg
actgtttattttataaattgccttgcttacagtgtcttgtcacagcaata
gaaaagtaaccaacacaccatctaactaaattggtgagctcaggttcaac
gagagactttgtctcaaaaataaggttaagagctaataagatggcttggc
aggtgaagtgtttgccatgcaagcctggttctgtcctcataagtcagatt
gtgtgtggagagaaatgagtccacaaattgttctctgacttccgcacatg
gacactggtattcggtctacacacacacacacacacaaacacacacacac
acacacagactcctggagcttgttgacaactctatctagctaagtcagtg
ggctccagtgagagtgtgtttcataagaaaggagagagaacatttgagga
aacacccacacagacacaggcacttacatgtgtacacatatatacacatt
cacacagttatcagacgtttacttctcattttgtttgagacttctcacaa
gggccttctgttgccttatataatatggtggaaatacaaagaaaagccaa
tagtcagaatggccaaatctatcctgttataagaaaccaacctcatgata
tccgtttatgagaggagagcacatgactctgcgcctctcagaggtcttgc
cgattaatactattacaaccaaaattaaacttcagcataaatttggaaag
gagacaagcattcagactttagcaagacccattcttttatgtaaactata
catttgatgttctttacagcccaaaagaacattttaaaacctgagggctt
gacaaatggctcagattaagagcctctcccagaggactcaagttcggttc
ccactacctacctgagtgggtcttctagctctgccttagctgcccagtgc
ccctgcctcctcaggcacactcactcgcactgatgagcacccttcccaca
tgccgaacgatgcacctacccgattaaaaaataattcttaaaataaaaca
tacccatgggcgatacccggtcaagccatgggtgcaagtatgttcagccc
attacacgtatcctctcgcaagaataactgta
gaattcttggtctgtttagctttagctgtggctaaacactgtttctcctc
agccttgagaccgggggctgccactctcgctttgcccagagcggccaggc
tctctctctgtgtatctgtggctgacttgaattcctgattctcttgcctc
cgcctcccgagggttgggatttcaggtacgtgccaccacgtctttctttt
tgaaatgatttcggttatctcggtagatccctttgggtaaggtttgcccc
gctcactctgtcccagccgatgtgaatcggttgcagatgcggcattttag
aggtattttcttgagtgtttcctaaaacaaagacatgttcctgcattcaa
aaccaagtgtcactgatgaagactcccctctcacactccatactaaaagt
tgtctcaatggagcccggtatggaggctgggttattttgttccgggagca
gacttggcattcagctgtggtctctgatttttttttttttagttctcagt
ttttcctgcactcgcatgacccgtatgcatttggagattccctgacagtt
ttgcagaagtaggtttagcgacataggagatatgtccagctatggatggc
ccttgttctgtgatgcagagcaggcactagattattcagaggctaggcag
atctagatggtgatcgctgtctagccacacaatctctggacacactccca
ggccacacccctcattagggtgcctccttagcaggggattcactttcacc
atctaggtctctggctttcctggagcacccaccctggagctatggtccac
gctttcctcatccacactctgagggccccgaatttggaagatacaggcct
ttgccgagtgctctattcctgtgtctttggtgctgagaaatcacccgatg
atccacggtcacatggtgcagaaagggacaggctcttccgcaaggaacag
attttgggcagtggccaggtaatcacacagcccagctccaggcttcattg
acaaggagtagtaatatggacacctgcataggacagccaaccagaggaca
aaatctgatgtttcccccagtgtcctcattgtttatagtatccactatga
gagagcttaagaggatgttattatcatgctagttagctttacctgccact
ggaaattgcttctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_131036243_131037420
seq2: B6Ng01-263C13.g_65_1230

seq1  GAATTCTTGGTCTGTTTAGCTTTAGCTGTGGCTAAACACTGTTTCTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGTCTGTTTAGCTTTAGCTGTGGCTAAACACTGTTTCTCCTC  50

seq1  AGCCTTGAGACCGGGGGCTGCCACTCTCGCTTTGCCCAGAGCGGCCAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGAGACCGGGGGCTGCCACTCTCGCTTTGCCCAGAGCGGCCAGGC  100

seq1  TCTCTCTCTGTGTATCTGTGGCTGACTTGAATTCCTGATTCTCTTGCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTGTGTATCTGTGGCTGACTTGAATTCCTGATTCTCTTGCCTC  150

seq1  CGCCTCCCGAGGGTTGGGATTTCAGGTACGTGCCACCACGTCTTTCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTCCCGAGGGTTGGGATTTCAGGTACGTGCCACCACGTCTTTCTTTT  200

seq1  TGAAATGATTTCGGTTATCTCGGTAGATCCCTTTGGGTAAGGTTTGCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGATTTCGGTTATCTCGGTAGATCCCTTTGGGTAAGGTTTGCCCC  250

seq1  GCTCACTCTGTCCCAGCCGATGTGAATCGGTTGCAGATGCGGCATTTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTCTGTCCCAGCCGATGTGAATCGGTTGCAGATGCGGCATTTTAG  300

seq1  AGGTATTTTCTTGAGTGTTTCCTAAAACAAAGACATGTTCCTGCATTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTTTCTTGAGTGTTTCCTAAAACAAAGACATGTTCCTGCATTCAA  350

seq1  AACCAAGTGTCACTGATGAAGACTCCCCTCTCACACTCCATACTAAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGTGTCACTGATGAAGACTCCCCTCTCACACTCCATACTAAAAGT  400

seq1  TGTCTCAATGGAGCCCGGTATGGAGGCTGGGTTATTTTGTTCCGGGAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAATGGAGCCCGGTATGGAGGCTGGGTTATTTTGTTCCGGGAGCA  450

seq1  GACTTGGCATTCAGCTGTGGTCTCTGATTTTTTTTTTTTTAGTTCTCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGCATTCAGCTGTGGTCTCTGATTTTTTTTTTTTTAGTTCTCAGT  500

seq1  TTTTCCTGCACTCGCATGACCCGTATGCATTTGGAGATTCCCTGACAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGCACTCGCATGACCCGTATGCATTTGGAGATTCCCTGACAGTT  550

seq1  TTGCAGAAGTAGGTTTAGCGACATAGGAGATATGTCCAGCTATGGATGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAAGTAGGTTTAGCGACATAGGAGATATGTCCAGCTATGGATGGC  600

seq1  CCTTGTTCTGTGATGCAGAGCAGGCACTAGATTATTCAGAGGCTAGGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTCTGTGATGCAGAGCAGGCACTAGATTATTCAGAGGCTAGGCAG  650

seq1  ATCTAGATGGTGATCGCTGTCTAGCCACACAATCTCTGGACACACTCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGATGGTGATCGCTGTCTAGCCACACAATCTCTGGACACACTCCCA  700

seq1  GGCCACACCCCTCATTAGGGTGCCTCCTTAGCAGGGGATTCACTTTCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACACCCCTCATTAGGGTGCCTCCTTAGCAGGGGATTCACTTTCACC  750

seq1  ATCTAGGTCTCTGGCTTTCCTGGAGCACCCACCCTGGAGCTATGGTCCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGTCTCTGGCTTTCCTGGAGCACCCACCCTGGAGCTATGGTCCAC  800

seq1  GCTTTCCTCATCCACACTCTGAGGGCCCCGAATTTGGAAGATACAGGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTCATCCACACTCTGAGGGCCCCGAATTTGGAAGATACAGGCCT  850

seq1  TTGCCGAGTGCTCTATTCCTGTGTCTTTGGTGCTGAGAAATCACCCGATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCGAGTGCTCTATTCCTGTGTCTTTGGTGCTGAGAAATCACCCGATG  900

seq1  ATCCACGGTCACATGGTGCAGAAAGGGACAGGCTCTTCCGCAAGGAACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACGGTCACATGGTGCAGAAAGGGACAGGCTCTTCCGCAAGGAACAG  950

seq1  ATTTT-GGCAGTGGCCAGGTAATCACACAGCCCAGCTCCAAGCTTCATTG  999
      ||||| |||||||||||||||||||||||||||||||||| |||||||||
seq2  ATTTTGGGCAGTGGCCAGGTAATCACACAGCCCAGCTCCAGGCTTCATTG  1000

seq1  AACACAGAGGTAGTAATAAGGGACACTGGAATAGGACAGGCAAACAGGAA  1049
       ||| ||  |||||||| | ||||||  | ||||||||| ||| || || 
seq2  -ACA-AGGAGTAGTAAT-ATGGACACCTGCATAGGACAGCCAACCA-GAG  1046

seq1  GACCAAAAATCTGAATGTTTCCCCCAGTTGTCCTCCATTGTTTATAAAGT  1099
      |||  |||||||| ||||||||||||| |||||| ||||||||||  |||
seq2  GAC--AAAATCTG-ATGTTTCCCCCAG-TGTCCT-CATTGTTTAT--AGT  1089

seq1  AT-CACTATGAAGAGGAGCTAAAGAAAGAATGTTATTATCATGGTAGTTA  1148
      || ||||||| ||| ||||| |||  || |||||||||||||| ||||||
seq2  ATCCACTATG-AGA-GAGCTTAAG--AGGATGTTATTATCATGCTAGTTA  1135

seq1  GTATTTACTG-CACTGGGAATATGTTCTGGG  1178
      |  ||  ||| |||||| |||   |||||||
seq2  GCTTTACCTGCCACTGGAAATTGCTTCTGGG  1166