BAC Information

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BAC

Clone NameB6Ng01-263G23
Chromosome2 (Build37)
Map Location 125,905,418 - 125,906,536
singlet/doubletsinglet
Overlap geneFgf7
Upstream geneSlc24a5, Myef2, LOC100043375, Slc12a1, Dut, A530010F05Rik, LOC100043698, Fbn1, Cep152, Shc4, Eid1, 3110001I20Rik, Cops2, Galk2
Downstream geneDtwd1, Atp8b4, Slc27a2, Hdc, Gabpb1, Usp8, LOC100043714, Usp50, Trpm7, 2010106G01Rik, Ap4e1, Blvra
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263G23.bB6Ng01-263G23.g
ACCGA067604GA067605
length1,2191,103
definitionB6Ng01-263G23.b B6Ng01-263G23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttctttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtatccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtagagttccttaa
tccacttagatttgaccttagtacaaggagatagaaatggatcaattcgc
attcttctacatgataaccgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagttcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatctctgggtcttcaattctattccattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtacagttttagttccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatctgcgattgccctttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatggtgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttctttagagacttgaagttcttatcatac
agatctttcactttcttagttagagtcatgccaaggtattttatattatt
tgtgactattgagaatggtgttgttccctaaatttctttctcagcctgtt
tatcctttgtgtacagaaaggcaattgacttgtggtggagttatttatat
ccagctacttcaccgaagctatttatcaagggttagggagttcctctgaa
gaattttagggtcacttatatattacctatcaatacatctgcaagaggtg
aatttggaccttcactttcgattgatcattgaatctcctgggttgcgaaa
taactctgggctgaggaca
gaattcccaagaatgcgcagtacctgaaatatgtctatcaaatgataagc
tcagtgatttattatagaatgactgatctttcaaaagaaagattgcacaa
aaccctaaaataattctattgggtaatattcacatatttaatatgatcca
ctgtgtagggcagtcttgggaaatagtgccatgcaaatcttaaagtagct
ctggttaagggaatgcatttaaagaggatttttgtaaccaaaaactgaag
agacgaggaaccacaggtgaccagaaaagcgaggagatagctaagctgag
tcgactgctctttaaaggtgcaacagcaaaaaacacatatatatgtttaa
aatgtaactggacaaagtaatgcaacatatggcaaaagtatgaacctgcg
gtacaggattttcacatcaaaagggacacttgtttaaaaacatctttgct
gtcttcataattgtgtccatgctcaaaaaaagtaggataaaactacaagt
tattaatagctgtattctttaattaaagctgtcagcctagttaaacaaag
actgttcacagtttattatttgtgtatgtaattcaccatttgaaacctaa
tagtttgaaacgcattagcaaagtctcagggcatttagaagcacattgac
tgtttctgaatgcatgtgcacgaagtttctatttataaaccacatttaca
gaggcttataaactagccagagatattcatagcacgaatacttgagactt
acaacacacagagaaattgtaaccaaaaactctaggagagataaaaatgg
accgaggaagactggcttcagacaggattctggccctgatatcactttac
attctagactattattgactacaacaaagaattgtgtaagtgaagtataa
ttacataaacttagtgcattagaaatttaggcataagtcattttggaaaa
aaatgaacaatttataaaaacatcacaatactgtccaggtcagaatgaca
ccatcagcaccgagcacaggtaccttttagctctcactgaatcatatcca
tctgttccctcaggatctctagttgacattttttcttttgaaaaaatttt
ttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_125905418_125906536
seq2: B6Ng01-263G23.g_70_1172

seq1  GAATTCCCAAGAATGCGCAGTACCTGAAATATGTCTATCAAATGATAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGAATGCGCAGTACCTGAAATATGTCTATCAAATGATAAGC  50

seq1  TCAGTGATTTATTATAGAATGACTGATCTTTCAAAAGAAAGATTGCACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGATTTATTATAGAATGACTGATCTTTCAAAAGAAAGATTGCACAA  100

seq1  AACCCTAAAATAATTCTATTGGGTAATATTCACATATTTAATATGATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTAAAATAATTCTATTGGGTAATATTCACATATTTAATATGATCCA  150

seq1  CTGTGTAGGGCAGTCTTGGGAAATAGTGCCATGCAAATCTTAAAGTAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAGGGCAGTCTTGGGAAATAGTGCCATGCAAATCTTAAAGTAGCT  200

seq1  CTGGTTAAGGGAATGCATTTAAAGAGGATTTTTGTAACCAAAAACTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTAAGGGAATGCATTTAAAGAGGATTTTTGTAACCAAAAACTGAAG  250

seq1  AGACGAGGAACCACAGGTGACCAGAAAAGCGAGGAGATAGCTAAGCTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGAGGAACCACAGGTGACCAGAAAAGCGAGGAGATAGCTAAGCTGAG  300

seq1  TCGACTGCTCTTTAAAGGTGCAACAGCAAAAAACACATATATATGTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACTGCTCTTTAAAGGTGCAACAGCAAAAAACACATATATATGTTTAA  350

seq1  AATGTAACTGGACAAAGTAATGCAACATATGGCAAAAGTATGAACCTGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAACTGGACAAAGTAATGCAACATATGGCAAAAGTATGAACCTGCG  400

seq1  GTACAGGATTTTCACATCAAAAGGGACACTTGTTTAAAAACATCTTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGATTTTCACATCAAAAGGGACACTTGTTTAAAAACATCTTTGCT  450

seq1  GTCTTCATAATTGTGTCCATGCTCAAAAAAAGTAGGATAAAACTACAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCATAATTGTGTCCATGCTCAAAAAAAGTAGGATAAAACTACAAGT  500

seq1  TATTAATAGCTGTATTCTTTAATTAAAGCTGTCAGCCTAGTTAAACAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATAGCTGTATTCTTTAATTAAAGCTGTCAGCCTAGTTAAACAAAG  550

seq1  ACTGTTCACAGTTTATTATTTGTGTATGTAATTCACCATTTGAAACCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCACAGTTTATTATTTGTGTATGTAATTCACCATTTGAAACCTAA  600

seq1  TAGTTTGAAACGCATTAGCAAAGTCTCAGGGCATTTAGAAGCACATTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGAAACGCATTAGCAAAGTCTCAGGGCATTTAGAAGCACATTGAC  650

seq1  TGTTTCTGAATGCATGTGCACGAAGTTTCTATTTATAAACCACATTTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGAATGCATGTGCACGAAGTTTCTATTTATAAACCACATTTACA  700

seq1  GAGGCTTATAAACTAGCCAGAGATATTCATAGCACGAATACTTGAGACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTATAAACTAGCCAGAGATATTCATAGCACGAATACTTGAGACTT  750

seq1  ACAACACACAGAGAAATTGTAACCAAAAACTCTAGGAGAGATAAAAATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACACAGAGAAATTGTAACCAAAAACTCTAGGAGAGATAAAAATGG  800

seq1  ACCGAGGAAGACTGGCTTCAGACAGGATTCTGGCCCTGATATCACTTTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAGGAAGACTGGCTTCAGACAGGATTCTGGCCCTGATATCACTTTAC  850

seq1  ATTCTAGACTATTATTGACTACAACAAAGAATTGTGTAAGTGAAGTATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGACTATTATTGACTACAACAAAGAATTGTGTAAGTGAAGTATAA  900

seq1  TTACATAAACTTAGTGCATTAGAAATTTAGGCATAAGTCATTTTGGAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATAAACTTAGTGCATTAGAAATTTAGGCATAAGTCATTTTGGAAAA  950

seq1  AAATGAACAATTTATAAAAACAATCACAATACTGTCCAAGGGTCAGAATG  1000
      ||||||||||||||||||||| ||||||||||||||||  ||||||||||
seq2  AAATGAACAATTTATAAAAAC-ATCACAATACTGTCCA--GGTCAGAATG  997

seq1  ACACCAATCAGCACCCGAGCACAGGTACCTTTTAGCTTCTCAACTGAAAT  1050
      ||||| ||||||| |||||||||||||||||||||| |||| ||||||  
seq2  ACACC-ATCAGCA-CCGAGCACAGGTACCTTTTAGC-TCTC-ACTGAA--  1041

seq1  TCATATCCCATCTGGTTCCCTCCAGGGGATCTCTAGTTTGACATTTTTCT  1100
      |||||| |||||| ||||||||    |||||||||| ||||||||||| |
seq2  TCATAT-CCATCT-GTTCCCTC---AGGATCTCTAG-TTGACATTTTT-T  1084

seq1  TTTTTAAAAAAATTTTTTT  1119
       |||| |||||||||||||
seq2  CTTTTGAAAAAATTTTTTT  1103