MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-263I09
Chromosome	2 (Build37)	18 (Build37)
Map Location	79,180,450 - 79,180,708	88,219,452 - 88,220,370
singlet/doublet	singlet	singlet
Overlap gene	Cerkl
Upstream gene	LOC383717, LOC100040476, LOC100040494, 4930401B11Rik, Ube2e3, LOC100040526, Itga4
Downstream gene	Neurod1, Ssfa2, Ppp1r1c, Pde1a, LOC668005, Prdx6-rs1, Dnajc10
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC383717 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins pseudo : _no_value

name	LOC100040476 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100040494 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040494
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 53 ESTs, 1 Protein pseudo : _no_value

name	4930401B11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73823 MGI:1921073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins

name	Ube2e3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22193 MGI:107412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040526 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040526
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Itga4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16401 MGI:96603
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cerkl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228094 MGI:3037816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Neurod1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18012 MGI:1339708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ssfa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70599 MGI:1917849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppp1r1c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75276 MGI:1923185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pde1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18573 MGI:1201792
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC668005 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668005
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Prdx6-rs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320769 MGI:1336888
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnajc10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66861 MGI:1914111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube2e3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981935 GeneID:22193 MGI:107412
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast) transcript_id : NM_009454.2

name	Itga4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326553 GeneID:16401 MGI:96603
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin alpha 4 transcript_id : NM_010576.3

name	Cerkl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326540 GeneID:228094 MGI:3037816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ceramide kinase-like transcript_id : NM_001048176.1

name	Neurod1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387581 GeneID:18012 MGI:1339708
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurogenic differentiation 1 transcript_id : NM_010894.2

name	Ssfa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37620166 GeneID:70599 MGI:1917849
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm specific antigen 2 transcript_id : NM_080558.3

name	Ppp1r1c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352812 GeneID:75276 MGI:1923185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1, regulatory (inhibitor) subunit 1C transcript_id : NM_172420.3

name	Pde1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801836 GeneID:18573 MGI:1201792
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 1A, calmodulin-dependent transcript_id : NM_016744.3

name	Pde1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58036490 GeneID:18573 MGI:1201792
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 1A, calmodulin-dependent transcript_id : NM_001009978.1

name	Pde1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58036492 GeneID:18573 MGI:1201792
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 1A, calmodulin-dependent transcript_id : NM_001009979.1

name	Prdx6-rs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385325 GeneID:320769 MGI:1336888
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxiredoxin 6, related sequence 1 transcript_id : NM_177256.3

name	Dnajc10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119508442 GeneID:66861 MGI:1914111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily C, member 10 transcript_id : NM_024181.2

name	Ube2e3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678477 CCDS:CCDS16167.1 GeneID:22193 MGI:107412
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004840 - ubiquitin conjugating enzyme activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA]; GO:0001558 - regulation of cell growth [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 note : ubiquitin-conjugating enzyme 4 product : ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog protein_id : NP_033480.1

name	Itga4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326554 CCDS:CCDS16168.1 GeneID:16401 MGI:96603
definition	GO_component : GO:0008305 - integrin complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0001974 - blood vessel remodeling [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IMP]; GO:0016477 - cell migration [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 note : integrin alpha 4 (Cd49d); VLA-4 receptor, alpha 4 subunit product : integrin alpha 4 protein_id : NP_034706.3

name	Cerkl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326541 GeneID:228094 MGI:3037816
definition	codon_start : 1 note : retinitis pigmentosa 26 (autosomal recessive) product : ceramide kinase-like protein_id : NP_001041641.1

name	Neurod1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563268 CCDS:CCDS16169.1 GeneID:18012 MGI:1339708
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0045165 - cell fate commitment [Evidence IGI]; GO:0007275 - development [Evidence IEA]; GO:0001747 - eye development (sensu Mammalia) [Evidence IGI]; GO:0030902 - hindbrain development [Evidence IMP]; GO:0007399 - nervous system development [Evidence IEA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : neurogenic differentiation 1 protein_id : NP_035024.1

name	Ssfa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37620167 CCDS:CCDS16170.1 GeneID:70599 MGI:1917849
definition	codon_start : 1 exception : mismatches in translation product : sperm specific antigen 2 protein_id : NP_542125.2

name	Ppp1r1c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29150268 CCDS:CCDS16171.1 GeneID:75276 MGI:1923185
definition	GO_function : GO:0004864 - protein phosphatase inhibitor activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : protein phosphatase 1 regulatory (inhibitor) subunit 1C product : protein phosphatase 1, regulatory (inhibitor) subunit 1C protein_id : NP_766008.2

name	Pde1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49457849 CCDS:CCDS16172.1 GeneID:18573 MGI:1201792
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : phosphodiesterase 1A, calmodulin-dependent protein_id : NP_058024.2

name	Pde1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58036491 CCDS:CCDS16173.1 GeneID:18573 MGI:1201792
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform PDE1A7 is encoded by transcript variant 7 product : phosphodiesterase 1A, calmodulin-dependent isoform PDE1A7 protein_id : NP_001009978.1

name	Pde1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58036493 CCDS:CCDS16174.1 GeneID:18573 MGI:1201792
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform PDE1A9 is encoded by transcript variant 9 product : phosphodiesterase 1A, calmodulin-dependent isoform PDE1A9 protein_id : NP_001009979.1

name	Prdx6-rs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28916703 GeneID:320769 MGI:1336888
definition	codon_start : 1 note : anti-oxidant protein 2 related sequence 1; peroxiredoxin 5 related sequence 1; 1-cysPrx-P1 product : peroxiredoxin 5 related sequence 1 protein protein_id : NP_796230.1

name	Dnajc10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119508443 GeneID:66861 MGI:1914111
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : ER-resident protein ERdj5 product : DnaJ (Hsp40) homolog, subfamily C, member 10 protein_id : NP_077143.2

name	LOC100040476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040476
definition	number : 1 pseudo : _no_value

name	LOC100040476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040476
definition	number : 2 pseudo : _no_value

name	LOC100040526 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040526
definition	number : 1 pseudo : _no_value

name	LOC668005 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668005
definition	number : 1 pseudo : _no_value

name	LOC383717 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249859 GeneID:383717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins product : similar to RPL10L protein pseudo : _no_value transcript_id : XR_032600.1

name	LOC100040494 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249841 GeneID:100040494
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 53 ESTs, 1 Protein product : similar to germ cell specific zinc finger protein pseudo : _no_value transcript_id : XR_031923.1

name	4930401B11Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149249860 GeneID:73823 MGI:1921073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins product : RIKEN cDNA 4930401B11 gene transcript_id : XR_032609.1

clone name	MSMg01-292E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519D01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-445O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516I11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-456P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098L03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-412M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538C04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-331F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495E17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-467C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514A24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-339O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307N10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-263I09.b	B6Ng01-263I09.g
ACC	GA067670	GA067671
length	1,120	923
definition	B6Ng01-263I09.b	B6Ng01-263I09.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(79,180,450 - 79,180,708)	(88,219,452 - 88,220,370)
sequence	gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacttcactccagtcagaatggcaaagatcaaaaactcaggtgacagc agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattgggcatagtacaactggaggatcccgcaatacctctcctgggc atatatccagaagatgtcccaaccggtaagaaggacacatgctctactat gttcatagcagccttgtttataatagccagaagctggaaagaacccagat gcacctcaactgaggaatggatacagaaaatgtggtacatttacacaatg gaatactactcagctattaaaaaaatgaatttatgaaatttctaggcaaa tggatggacctggagggtatcatcctgagtgaggtaacccaatcacaaag gaactctcacaatatgtactcactgataagtggatattagcccagaaact taggatactcaagatataagatacaacttgccaaacgcatgaaattcaag aagaacgaagaccatagtgtggacactttaccctttttaaaaatgggaac aaaacacccatggaaggagttacagagacaaaatttggagctgtgatgaa aggatggaccctctagtgattgccatatgcagggatccatcccataatca gcttccaaatgcggacaccattgcatacactagcaagattttgctgaaag gacccagatatacctctctcttgtgagactatgccggggcctagcaaaca cacaagtggatgatcacagtcagctattggatgggtcacacggcccccaa tgaaggagctagagaattacccaaggagctaaagggaactgcaccctata ggtggacacaatatgactaccagtattctgggagctcttgtcttagctgc atatgtatcaaagttggcctagttgcatcactgcaaagagaaggcccatt ggacttgcaaactttatatg	gaattcacactattatgttactgttgtactttgagtaaggattaaacctt aggctcacatgtttgaaggcttagtcaccagttactgggcattgttaaga aaagagtacttgtggtcttattggaacaggtgtggccttgttagaggaaa catattactgtgggttagcactgcggttttgaaagcccacactagaccta gtgactctgcctgctgccttaggattagcatgaaaatgtctcagctactg ctcccgcaccatgtctgtctgttctgtgccatgataaccattgagtaacc ctcaaaatttatcagcacactcagctcaatatgttttgtttgtttgtttt gtatgagagttgcttggctatgatgtgtcttcataacagtaaagcaataa gataatgatgtttgggaaagtgtaaatgaatataaaatcatcaataattt aaggttaatccttacaaaagctttcctgaaaagagatagagagatgattc agactttaagaacactggcttctgtttcagaatattctttcagaatattc aattctaagcacccacattgtgactcacaactcttactccagttccaaga gacctcacactctattttgtcctccatggatgcaaggcatacacaatgtg ctccacatgtatagatgcagccaaaaacacctgtatatataacacttaaa taataaaattaaaaataaaaattttgttaaaattatacatctgcttttga ccaaatgatattattgtctctgtttattcttatttgaaactgtggttgaa tgtacataatgtcatggttctaaagaaaagtatgctacccaagagaatgt cattaattttgtgatttttttcttttgtctttcaatagatgtgtatgtgt aagtggggtggtggggggtgtgg
quality values	Open. Hide. 58 34 35 41 58 52 62 31 20 62 62 62 62 47 47 62 47 30 31 62 47 62 62 62 62 62 62 62 54 47 35 62 34 28 46 44 59 50 59 59 62 59 59 62 62 62 62 62 59 59 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 54 32 62 62 59 62 62 59 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 62 62 59 62 62 59 62 59 62 62 54 59 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 49 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 56 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 54 62 62 62 62 62 49 49 62 62 62 62 62 62 49 47 62 62 62 62 62 62 54 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 54 62 62 62 62 47 42 62 62 62 62 62 62 62 62 62 46 58 58 58 54 58 58 58 43 58 54 58 58 54 58 58 52 58 58 58 52 58 54 58 58 54 58 58 58 54 58 58 58 58 54 58 42 58 58 58 58 58 54 58 58 58 58 54 58 58 58 58 58 54 58 58 54 58 58 58 43 52 45 58 58 54 58 58 45 47 46 58 58 43 54 54 54 52 39 58 42 28 50 51 51 58 52 58 51 45 40 49 52 53 58 53 45 33 50 51 40 58 51 58 58 58 54 42 31 51 51 48 50 51 52 53 58 58 58 40 47 58 50 50 51 50 58 49 34 58 40 34 46 54 58 24 39 23 51 50 52 39 41 51 53 50 58 40 49 40 52 53 52 58 51 36 42 38 43 50 58 49 49 23 24 58 58 58 50 42 58 38 41 50 35 39 39 58 58 42 53 50 44 43 42 37 39 43 51 58 43 18 58 51 32 52 39 31 50 32 53 58 29 31 42 26 54 54 37 32 54 52 54 37 53 28 42 51 51 39 42 33 32 40 52 54 52 37 53 27 24 45 53 33 19 18 42 49 49 41 42 32 40 53 34 32 46 41 35 41 33 42 42 39 40 37 37 24 54 33 14 31 32 47 24 45 25 54 36 32 42 37 26 35 32 32 29 45 53 45 32 45 30 53 40 32 34 31 32 25 32 21 33 30 32 31 45 51 31 29 29 36 35 36 31 35 21 28 26 32 27 34 31 37 27 51 51 33 27 29 43 31 45 51 32 31 39 39 31 45 30 31 33 37 24 26 31 17 21 30 33 30 33 32 34 32 20 21 37 30 30 43 23 42 24 33 28 30 31 37 42 33 46 46 29 16 21 31 31 13 37 33 46 37 28 24 30 19 32 31 31 18 31 34 37 25 16 21 25 24 22 24 36 23 36 33 33 25 21 32 38 31 23 20 32 12 12 17 24 47 26 26 31 27 18 9 5 7 11 21 38 28 28 23 13 16 27 32 26 25 23 11 31 19 33 34 32 24 33 15 32 33 10 22 23 26 27 25 11 11 25 15 28 18 32 32 14 43 19 19 48 24 25 21 26 31 32 11 16 6 24 25 21 16 20 9 24 19 21 9 19 12 9 29 17 9 15 29 15 20 12 30 11 25 23 8 9 22 24 9 24 15 5 6 17 19 38 18 20 12 27 27 19 12 21 16 16 14 24 25 9 8 28 16 24 24 20 19 8 5 8 18 14 20 24 29 47 27 14 13 12 10 13 11 10 23 19 7 18 10 11 3 4 23 23 7 7 13 19 11 13 21 7 7 14 7 6 6 6 13 5 19 10 10 14 10 13 7 6 6 9 18 16 16 6 25 6 14 25 30 9 6 6 10 8 7	Open. Hide. 62 47 62 47 62 44 34 62 59 62 44 43 45 24 28 24 40 50 38 62 59 62 62 62 62 62 59 62 59 62 54 62 62 59 62 59 62 62 59 62 54 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 59 62 59 62 59 62 49 42 54 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 59 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 45 62 62 62 62 62 62 62 44 62 54 42 62 62 62 54 62 62 58 58 54 53 58 54 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 52 58 58 54 54 54 58 58 58 58 58 54 39 54 58 46 54 54 54 58 54 54 58 58 58 58 58 51 58 52 58 54 58 58 58 54 58 54 58 58 58 58 58 51 58 58 58 54 51 49 58 58 58 58 58 54 51 58 58 58 45 37 51 58 58 54 42 31 58 48 58 39 49 33 58 54 58 52 52 46 51 58 53 49 51 49 58 58 58 58 52 51 58 50 43 44 39 51 58 58 41 41 51 53 41 46 37 58 50 49 51 52 51 50 51 47 58 51 58 51 58 58 53 42 41 40 43 50 50 51 53 52 52 53 52 50 51 50 50 53 34 53 49 31 58 58 58 50 39 31 32 54 51 54 39 45 52 53 53 53 40 40 54 49 54 40 54 50 24 54 51 37 32 50 40 52 54 54 37 39 38 40 36 25 25 44 45 37 54 54 54 29 39 35 54 51 42 45 52 23 54 54 32 33 35 40 45 42 52 31 53 52 45 52 45 52 53 51 47 45 31 12 16 19 51 32 32 52 53 31 45 42 40 32 45 31 47 34 53 34 51 32 44 33 49 31 40 42 34 38 35 31 42 45 51 51 30 42 51 42 32 31 51 31 51 21 15 38 30 35 44 30 51 27 28 37 29 31 31 51 30 51 31 36 29 31 42 31 24 28 32 31 31 48 33 28 43 48 48 42 28 31 32 31 36 38 34 32 30 46 41 22 32 32 46 31 32 24 31 43 26 31 31 32 41 35 36 34 47 46 31 29 31 31 27 9 48 46 47 46 46 39 31 24 46 46 30 26 25 30 33 48 32 32 27 23 31 32 24 35 19 31 21 15 21 33 32 21 13 17 21 31 36 25 31 31 43 20 8 4 6 9 7 12 36 44 36 41 16 13 9 11 7 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_79180450_79180708
seq2: B6Ng01-263I09.b_914_1165 (reverse)

seq1  CATATAAAGTTTGCAAGTCCAATGGGCC-TCTCTTTGCAGTGATGGCCGA  49
      |||||||||||||||||||||||||||| ||||||||||||||||  | |
seq2  CATATAAAGTTTGCAAGTCCAATGGGCCTTCTCTTTGCAGTGATG--CAA  48

seq1  CTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCT-CCGGGGT  98
      |||||||| | ||||||||||||||||||| || |||||||| || |  |
seq2  CTAGGCCAAC-TTTGATACATATGCAGCTA-AGACAAGAGCTCCCAGAAT  96

seq1  ACTGATTAGTTCATATTGTTGTTCCACATATAGGGTTGCAGATCCCTTTA  148
      ||||  ||| |||||||||   ||||| ||||||| ||||| ||||||||
seq2  ACTG-GTAG-TCATATTGT--GTCCACCTATAGGG-TGCAGTTCCCTTTA  141

seq1  GCTCCTTGGGTACTTTCTCTAGCTCCCCCATTGGGGGCCGTGTGACCCAT  198
      ||||||||||||  ||||||||||||  ||||||||||||||||||||||
seq2  GCTCCTTGGGTA-ATTCTCTAGCTCCTTCATTGGGGGCCGTGTGACCCAT  190

seq1  CCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCAC  248
      ||||||||||||||||| ||||||||| ||||||||||||||||||||| 
seq2  CCAATAGCTGACTGTGATCATCCACTTGTGTGTTTGCTAGGCCCCGGCAT  240

seq1  AGTCTCA-AAGA  259
      ||||||| ||||
seq2  AGTCTCACAAGA  252

seq1: chr18_88219452_88220370
seq2: B6Ng01-263I09.g_69_991 (reverse)

seq1  CCACACCCCACA----CCCACTTACACATACACATCTATTGAAAGACAAA  46
      ||||||||| ||    ||||||||||||||||||||||||||||||||||
seq2  CCACACCCCCCACCACCCCACTTACACATACACATCTATTGAAAGACAAA  50

seq1  AGAAAAAAATCACAAAATTAATGACATTCTCTTGGGTAGCATACTTTTCT  96
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAATCACAAAATTAATGACATTCTCTTGGGTAGCATACTTTTCT  100

seq1  TTAGAACCATGACATTATGTACATTCAACCACAGTTTCAAATAAGAATAA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACCATGACATTATGTACATTCAACCACAGTTTCAAATAAGAATAA  150

seq1  ACAGAGACAATAATATCATTTGGTCAAAAGCAGATGTATAATTTTAACAA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACAATAATATCATTTGGTCAAAAGCAGATGTATAATTTTAACAA  200

seq1  AATTTTTATTTTTAATTTTATTATTTAAGTGTTATATATACAGGTGTTTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTATTTTTAATTTTATTATTTAAGTGTTATATATACAGGTGTTTT  250

seq1  TGGCTGCATCTATACATGTGGAGCACATTGTGTATGCCTTGCATCCATGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCATCTATACATGTGGAGCACATTGTGTATGCCTTGCATCCATGG  300

seq1  AGGACAAAATAGAGTGTGAGGTCTCTTGGAACTGGAGTAAGAGTTGTGAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAAAATAGAGTGTGAGGTCTCTTGGAACTGGAGTAAGAGTTGTGAG  350

seq1  TCACAATGTGGGTGCTTAGAATTGAATATTCTGAAAGAATATTCTGAAAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATGTGGGTGCTTAGAATTGAATATTCTGAAAGAATATTCTGAAAC  400

seq1  AGAAGCCAGTGTTCTTAAAGTCTGAATCATCTCTCTATCTCTTTTCAGGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCAGTGTTCTTAAAGTCTGAATCATCTCTCTATCTCTTTTCAGGA  450

seq1  AAGCTTTTGTAAGGATTAACCTTAAATTATTGATGATTTTATATTCATTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTTGTAAGGATTAACCTTAAATTATTGATGATTTTATATTCATTT  500

seq1  ACACTTTCCCAAACATCATTATCTTATTGCTTTACTGTTATGAAGACACA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTCCCAAACATCATTATCTTATTGCTTTACTGTTATGAAGACACA  550

seq1  TCATAGCCAAGCAACTCTCATACAAAACAAACAAACAAAACATATTGAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCCAAGCAACTCTCATACAAAACAAACAAACAAAACATATTGAGC  600

seq1  TGAGTGTGCTGATAAATTTTGAGGGTTACTCAATGGTTATCATGGCACAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTGCTGATAAATTTTGAGGGTTACTCAATGGTTATCATGGCACAG  650

seq1  AACAGACAGACATGGTGCGGGAGCAGTAGCTGAGACATTTTCATGCTAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACAGACATGGTGCGGGAGCAGTAGCTGAGACATTTTCATGCTAAT  700

seq1  CCTAAGGCAGCAGGCAGAGTCACTAGGTCTAGTGTGGGCTTTCAAAACCG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGGCAGCAGGCAGAGTCACTAGGTCTAGTGTGGGCTTTCAAAACCG  750

seq1  CAGTGCTAACCCACAGTAATATGTTTCCTCTAACAAGGCCACACCTGTTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTAACCCACAGTAATATGTTTCCTCTAACAAGGCCACACCTGTTC  800

seq1  CAATAAGACCACAAGTACTCTTTTCTTAACAATGCCCAGTAACTGGTGAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGACCACAAGTACTCTTTTCTTAACAATGCCCAGTAACTGGTGAC  850

seq1  TAAGCCTTCAAACATGTGAGCCTAAGGTTTAATCCTTACTCAAAGTACAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTTCAAACATGTGAGCCTAAGGTTTAATCCTTACTCAAAGTACAA  900

seq1  CAGTAACATAATAGTGTGAATTC  919
      |||||||||||||||||||||||
seq2  CAGTAACATAATAGTGTGAATTC  923

BAC Information

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BAC

BAC End Information

Alignment Information