BAC Information

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BAC

Clone NameB6Ng01-263K17
Chromosome2 (Build37)
Map Location 155,050,787 - 155,246,141
singlet/doubletdoublet
Overlap geneItch, Dynlrb1, Map1lc3a, Cdc91l1, Trp53inp2, Ncoa6
Upstream geneBC018465, 5430413K10Rik, OTTMUSG00000015915, Cdk5rap1, Snta1, Cbfa2t2, Apba2bp, 1700003F12Rik, E2f1, Pxmp4, Zfp341, Chmp4b, LOC668936, LOC435692, Raly, Eif2s2, a, Ahcy, LOC100043877, LOC668931
Downstream geneLOC668938, Ggtl3, Acss2, Gss, Myh7b, Trpc4ap, Edem2, Procr, Mmp24, Itgb4bp, 5530400B04Rik, 2410003P15Rik, Gdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263K17.bB6Ng01-263K17.g
ACCGA067776GA067777
length1,1551,125
definitionB6Ng01-263K17.b B6Ng01-263K17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,244,978 - 155,246,141)(155,050,787 - 155,051,912)
sequence
gaattccactagttatacctaaaggagatttatttatttattttgtaagg
tgcctcttgtatgaagaaaaagcaatggagcttaatgtgtgagaggtaaa
acgattccagtaaaacttattcatctccatgtttattatttattcttatt
aatcatgacctcgtgcacatgactgtgcttggagcttttcagtgaagtat
agagttcagtaaaactgccatccaataagcatatcccccaccaaaagaca
cccattgcctacccagaaaaaccctcgcatcttcagtgcaacatagtagg
catgctcccatggttcccggtgaaattaagttgctcatcagttctcactc
tcttataattgattttgctgaaatacaggctctaatattacttctaagac
gtttttagaaaatgtaagaacatggctgctgcaaacacaattactgattt
agttaagtggaagcatgtaaatggggacttgctgctaatggaaggacaag
tgcatatttgtctacagagagtttttgagggcactaaaaatgtggcccta
ataaatttgaagtgagctttaggtattgttgctttcgtagagcagtggat
acctcaccgaggtggtctgaccacatcaagacctgtggtacacacacaag
tggatctgagattctctttattgcaaacttgctttctgaaattaggcctt
cctaaaaggatataaacttgagtaagattatatcagagcatggtttctgg
tactgtagccatcagtcacagcagatgttaatgagagaaaggcataaatt
gatacaggcctcactttgaagttcctgtgaactcttgtcttttccaaaga
gacaagcccgacactggagggagggagactttctgcaagattgttaccca
tttccctcaaaggaaaaaattattacccatctatccttaattgggaccct
actcttgttttattgtatttcatatcatttgttggagtatgagagattta
gcatactcctttggtgcctgtgttacagtatataaatatgggagtccatg
tactacaggaggaaagttgaggccttcacttgctatgaattggctcagat
catatgtagggagcagaatggccatttttcctgccatgttccaagtgata
atttt
gaattcagggaaaacttggtccccgccaacatatgaccatacctctcttc
attcagtttgtaattgttctattgccttgcaaatactaaactttacaaac
agtatcagcactgtggttccttcacgtttttagaaattaacctagaatta
aaataagttcagatgaattcatctaagatcattcttgatttttttaaatc
ctacacataaattgaagctttatggtgttgaagtaatccaacaccttagt
tacatttcatttttgctaaactattcaagttgcaaccatttcctaacaca
aatggaggtcagtggtgcagactctgcagtcacaacagcgtccagcagcc
acacagctgcgctgtcttcacactccactcctgacacaggagcagccgtg
tctaccctcttacatggtcctgatctacaatatttttctctcccctaaaa
attgtagatttcccttttctttccatgactcctttatcttaggctgctcc
tttagtaactgatgaatgcactttgaccttctctgtaggtcatttacctt
ggcttagcattagactgtgaggatggttgctgcccagactttatgggcag
caagatgaaacctcagccaggtgagtccctattgtagccaaatcccaaaa
ttagccttatttctctaatggggaccttgaaatgtgttggtggcatagca
taaagccaagaacaccaagtgtgacaaacccctgtcccataggaaagaaa
gtgtttctgtgtccctagctgctcatcctgttctcatcctgggacagttt
gaactcgtgcagctgtgctcccttaacactgccatccctcagcagagacg
tgacagacgggttgcctcatgaagaagtgatcagtgaagggagagctcgg
ctcctccccagccctctttttacccttataccacaagaaatacatgtcat
ctctagaagccctagttctttccaaagtaggaaatttctgccttttgttg
ggtagggttaaaaaaaaatgtatatgctaatgcttttgtcttaacgaagc
gatgtcttgccactatccattcactacataggcctgaactttggtaatta
atgctataatattaggcttctacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_155244978_155246141
seq2: B6Ng01-263K17.b_44_1198 (reverse)

seq1  AAAATTTACACTTAGAACATGCCAAGGAAAAAATGGCAATCTGCTCCCTA  50
      ||||||  ||||| ||||||| | ||||||||  | || |||||||||||
seq2  AAAATTATCACTTGGAACATGGC-AGGAAAAATGGCCATTCTGCTCCCTA  49

seq1  CATATGATCTGAGCCATATCATAGCAAGGTTTGAGGGCTC-ACTTTTCT-  98
      ||||||||||||||||  ||||||||||  |  ||| ||| ||||| || 
seq2  CATATGATCTGAGCCAATTCATAGCAAG--TGAAGGCCTCAACTTTCCTC  97

seq1  CTGTAGTACAATGGACTCCCAATATTTATATACTGTAACACAGGCACCAA  148
      ||||||||| |||||||||| |||||||||||||||||||||||||||||
seq2  CTGTAGTAC-ATGGACTCCC-ATATTTATATACTGTAACACAGGCACCAA  145

seq1  AGGAGTATGCTAAATTCTCTCATACTCAAACAAATTGATATGAAATACAA  198
      |||||||||||||| |||||||||||| |||||| |||||||||||||||
seq2  AGGAGTATGCTAAA-TCTCTCATACTCCAACAAA-TGATATGAAATACAA  193

seq1  TAAAACAAAGAGTAGGGTCCCAATTAAGGATAGATGGGTAATAATTTTTT  248
      |||||| ||||||||||||||||||||||||||||||||||||| |||||
seq2  TAAAAC-AAGAGTAGGGTCCCAATTAAGGATAGATGGGTAATAA-TTTTT  241

seq1  TCCTTTGAGGGAAATGGGTAACAATCTTTGCAGAAAAGTCTCCCTCCCTC  298
      |||||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  TCCTTTGAGGGAAATGGGTAACAATC-TTGCAG-AAAGTCTCCCTCCCTC  289

seq1  CAGTGTCGGGCTTGTCTCTTTGGAAAAGACAAGAGTTCACAGGAACTTCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCGGGCTTGTCTCTTTGGAAAAGACAAGAGTTCACAGGAACTTCA  339

seq1  AAGTGAGGCCTGTATCAATTTATGCCTTTCTCTCATTAACATCTGCTGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGGCCTGTATCAATTTATGCCTTTCTCTCATTAACATCTGCTGTG  389

seq1  ACTGATGGCTACAGTACCAGAAACCATGCTCTGATATAATCTTACTCAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGGCTACAGTACCAGAAACCATGCTCTGATATAATCTTACTCAAG  439

seq1  TTTATATCCTTTTAGGAAGGCCTAATTTCAGAAAGCAAGTTTGCAATAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATCCTTTTAGGAAGGCCTAATTTCAGAAAGCAAGTTTGCAATAAA  489

seq1  GAGAATCTCAGATCCACTTGTGTGTGTACCACAGGTCTTGATGTGGTCAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCTCAGATCCACTTGTGTGTGTACCACAGGTCTTGATGTGGTCAG  539

seq1  ACCACCTCGGTGAGGTATCCACTGCTCTACGAAAGCAACAATACCTAAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTCGGTGAGGTATCCACTGCTCTACGAAAGCAACAATACCTAAAG  589

seq1  CTCACTTCAAATTTATTAGGGCCACATTTTTAGTGCCCTCAAAAACTCTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTCAAATTTATTAGGGCCACATTTTTAGTGCCCTCAAAAACTCTC  639

seq1  TGTAGACAAATATGCACTTGTCCTTCCATTAGCAGCAAGTCCCCATTTAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACAAATATGCACTTGTCCTTCCATTAGCAGCAAGTCCCCATTTAC  689

seq1  ATGCTTCCACTTAACTAAATCAGTAATTGTGTTTGCAGCAGCCATGTTCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCCACTTAACTAAATCAGTAATTGTGTTTGCAGCAGCCATGTTCT  739

seq1  TACATTTTCTAAAAACGTCTTAGAAGTAATATTAGAGCCTGTATTTCAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTCTAAAAACGTCTTAGAAGTAATATTAGAGCCTGTATTTCAGC  789

seq1  AAAATCAATTATAAGAGAGTGAGAACTGATGAGCAACTTAATTTCACCGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAATTATAAGAGAGTGAGAACTGATGAGCAACTTAATTTCACCGG  839

seq1  GAACCATGGGAGCATGCCTACTATGTTGCACTGAAGATGCGAGGGTTTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCATGGGAGCATGCCTACTATGTTGCACTGAAGATGCGAGGGTTTTT  889

seq1  CTGGGTAGGCAATGGGTGTCTTTTGGTGGGGGATATGCTTATTGGATGGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTAGGCAATGGGTGTCTTTTGGTGGGGGATATGCTTATTGGATGGC  939

seq1  AGTTTTACTGAACTCTATACTTCACTGAAAAGCTCCAAGCACAGTCATGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACTGAACTCTATACTTCACTGAAAAGCTCCAAGCACAGTCATGT  989

seq1  GCACGAGGTCATGATTAATAAGAATAAATAATAAACATGGAGATGAATAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGAGGTCATGATTAATAAGAATAAATAATAAACATGGAGATGAATAA  1039

seq1  GTTTTACTGGAATCGTTTTACCTCTCACACATTAAGCTCCATTGCTTTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACTGGAATCGTTTTACCTCTCACACATTAAGCTCCATTGCTTTTT  1089

seq1  CTTCATACAAGAGGCACCTTACAAAATAAATAAATAAATCTCCTTTAGGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATACAAGAGGCACCTTACAAAATAAATAAATAAATCTCCTTTAGGT  1139

seq1  ATAACTAGTGGAATTC  1164
      ||||||||||||||||
seq2  ATAACTAGTGGAATTC  1155

seq1: chr2_155050787_155051912
seq2: B6Ng01-263K17.g_69_1193

seq1  GAATTCAGGGAAAACTTGGTCCCCGCCAACATATGACCATACCTCTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGAAAACTTGGTCCCCGCCAACATATGACCATACCTCTCTTC  50

seq1  ATTCAGTTTGTAATTGTTCTATTGCCTTGCAAATACTAAACTTTACAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTTTGTAATTGTTCTATTGCCTTGCAAATACTAAACTTTACAAAC  100

seq1  AGTATCAGCACTGTGGTTCCTTCACGTTTTTAGAAATTAACCTAGAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCAGCACTGTGGTTCCTTCACGTTTTTAGAAATTAACCTAGAATTA  150

seq1  AAATAAGTTCAGATGAATTCATCTAAGATCATTCTTGATTTTTTTAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGTTCAGATGAATTCATCTAAGATCATTCTTGATTTTTTTAAATC  200

seq1  CTACACATAAATTGAAGCTTTATGGTGTTGAAGTAATCCAACACCTTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACATAAATTGAAGCTTTATGGTGTTGAAGTAATCCAACACCTTAGT  250

seq1  TACATTTCATTTTTGCTAAACTATTCAAGTTGCAACCATTTCCTAACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCATTTTTGCTAAACTATTCAAGTTGCAACCATTTCCTAACACA  300

seq1  AATGGAGGTCAGTGGTGCAGACTCTGCAGTCACAACAGCGTCCAGCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGGTCAGTGGTGCAGACTCTGCAGTCACAACAGCGTCCAGCAGCC  350

seq1  ACACAGCTGCGCTGTCTTCACACTCCACTCCTGACACAGGAGCAGCCGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTGCGCTGTCTTCACACTCCACTCCTGACACAGGAGCAGCCGTG  400

seq1  TCTACCCTCTTACATGGTCCTGATCTACAATATTTTTCTCTCCCCTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCCTCTTACATGGTCCTGATCTACAATATTTTTCTCTCCCCTAAAA  450

seq1  ATTGTAGATTTCCCTTTTCTTTCCATGACTCCTTTATCTTAGGCTGCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGATTTCCCTTTTCTTTCCATGACTCCTTTATCTTAGGCTGCTCC  500

seq1  TTTAGTAACTGATGAATGCACTTTGACCTTCTCTGTAGGTCATTTACCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAACTGATGAATGCACTTTGACCTTCTCTGTAGGTCATTTACCTT  550

seq1  GGCTTAGCATTAGACTGTGAGGATGGTTGCTGCCCAGACTTTATGGGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGCATTAGACTGTGAGGATGGTTGCTGCCCAGACTTTATGGGCAG  600

seq1  CAAGATGAAACCTCAGCCAGGTGAGTCCCTATTGTAGCCAAATCCCAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGAAACCTCAGCCAGGTGAGTCCCTATTGTAGCCAAATCCCAAAA  650

seq1  TTAGCCTTATTTCTCTAATGGGGACCTTGAAATGTGTTGGTGGCATAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTTATTTCTCTAATGGGGACCTTGAAATGTGTTGGTGGCATAGCA  700

seq1  TAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCAAGAACACCAAGTGTGACAAACCCCTGTCCCATAGGAAAGAAA  750

seq1  GTGTTTCTGTGTCCCTAGCTGCTCATCCTGTTCTCATCCTGGGACAGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCTGTGTCCCTAGCTGCTCATCCTGTTCTCATCCTGGGACAGTTT  800

seq1  GAACTCGTGCAGCTGTGCT-CCTTAACACTGCCAT-CCTCAGCAGAGACG  848
      ||||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  GAACTCGTGCAGCTGTGCTCCCTTAACACTGCCATCCCTCAGCAGAGACG  850

seq1  TGACAGACGGGTTGCCTCATGAAGAAGTGATCAGTGAAGGGAGAGCTCGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGACGGGTTGCCTCATGAAGAAGTGATCAGTGAAGGGAGAGCTCGG  900

seq1  CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCCAGCCCTCTTTTTACCCTTATACCACAAGAAATACATGTCAT  950

seq1  CTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATCTCTGCCTTTTTGTT  998
      ||||||||||||||||||||||||||||||||||| ||||||||||  | 
seq2  CTCTAGAAGCCCTAGTTCTTTCCAAAGTAGGAAATTTCTGCCTTTTGTTG  1000

seq1  GGTAGGGTTAAAAAAAAATGTATATGCTAATTGCTTTGTCTT-ACAGAGC  1047
      |||||||||||||||||||||||||||||||   |||||||| ||  |||
seq2  GGTAGGGTTAAAAAAAAATGTATATGCTAATGCTTTTGTCTTAACGAAGC  1050

seq1  GAATGTCTGCCAACTATCCATTCACTACATAGGCCTGAACTTTGGTAATA  1097
      | ||||||  | ||||||||||||||||||||||||||||||||||||| 
seq2  G-ATGTCTTGCCACTATCCATTCACTACATAGGCCTGAACTTTGGTAATT  1099

seq1  AATGGCTATAAATATTAAGCCTTCTACAA  1126
      ||| ||||| |||||| || |||||||||
seq2  AAT-GCTAT-AATATT-AGGCTTCTACAA  1125