BAC Information

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BAC

Clone NameB6Ng01-263M18
Chromosome2 (Build37)
Map Location 153,666,441 - 153,815,078
singlet/doubletdoublet
Overlap geneSpag4l, Bpil1, Bpil3, Rya3, LOC100043870, Gm1006, EG545477
Upstream geneTpx2, Mylk2, Fkhl18, Dusp15, Ttll9, Pdrg1, Xkr7, BC020535, Hck, Tm9sf4, Tspyl3, Plagl2, Pofut1, Kif3b, 2500004C02Rik, Asxl1, 8430427H17Rik, Commd7, 7530422B04Rik, Dnmt3b, LOC668932, Mapre1, EG329541, LOC100043869
Downstream genePsp, LOC100043652, 1700058C13Rik, Plunc, 2310021H06Rik, U46068, BC018465, 5430413K10Rik, OTTMUSG00000015915, Cdk5rap1, Snta1, Cbfa2t2, Apba2bp, 1700003F12Rik, E2f1, Pxmp4, Zfp341, Chmp4b, LOC668936, LOC435692, Raly, Eif2s2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263M18.bB6Ng01-263M18.g
ACCGA067872GA067873
length749530
definitionB6Ng01-263M18.b B6Ng01-263M18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(153,666,441 - 153,667,188)(153,814,543 - 153,815,078)
sequence
gaattcacagaagttagttctttctctatcacgtcagtttggggactgag
ttcaggtcatccatgtcaggataatatctgacttctctctctcctgctct
accccagatctcacctagacaggtcccagccattttatgcccttgtcatt
tctcacataagctgctgggaatctgactgagtgagggccactagggttct
tcccatgtcagcctacacgtggcccaggaccctctaggcctgagctccag
gtatttcctaggactggagtctggcgagtctagagatttggcgttgccgg
tatgatacctggcatgaggcaggcactcagcgttcagctgagtgggtggg
gtggaggggcagggcagtggggttcagagtcctggttctgaacagggtct
ggtctcatgacaggaacatttggcctgaatctctggaagagactgcaaga
ggctgcgatggtggatgaactggagcagggggcaagtttggagaagaagc
ctgctacaaccggtgccaccctgaagcactccttcctagagatggagtga
gttcctggagccaacctggggctccctggccccagcctggcatggcatga
gaagcttagggtccgaaggcaacgtgtggccccattcagccatctcagtg
cccaaaccaagcagtcaggaatgttgtgttttataacaagaaaggaaagg
ccaggaatatgtttggtggaggtacggtatgggtgtgcgggaagggggt
acttggatcccagtgaatactgcccggcagctcttcacggaaaaggacat
ttgaccaggttccatctgttgcaattgcaaggggatctcgatgtccacat
ccactgtggagccactgagaaatgagagtatcctagttgcgtgggagagg
gctgttagaagctgaatgcatgtctgggaataatactctaaaaggtttca
ctgggacttgcaaacaggtctgggcatttatggctgagaggtaactgata
cacatactttaaaaaaaaaggattcctgatggcctatattttaattatat
atatatatatatatatcaaatacatatatatatatattcaatgaaataat
ctattgaagtaaatgcttatgcatagctcaagactcattttaaaaatgag
tctagtgaaaggctacttctttctctgtctgcctagagctctgccaaact
catgcacatctctcatattaatatctcctcctggacttatatgcacactt
acaaccacccatgtcgaatgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_153666441_153667188
seq2: B6Ng01-263M18.b_44_792

seq1  GAATTCACAGAAGTTAGTTCTTTCTCTATCACGTCAGTTTGGGGACTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAAGTTAGTTCTTTCTCTATCACGTCAGTTTGGGGACTGAG  50

seq1  TTCAGGTCATCCATGTCAGGATAATATCTGACTTCTCTCTCTCCTGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTCATCCATGTCAGGATAATATCTGACTTCTCTCTCTCCTGCTCT  100

seq1  ACCCCAGATCTCACCTAGACAGGTCCCAGCCATTTTATGCCCTTGTCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGATCTCACCTAGACAGGTCCCAGCCATTTTATGCCCTTGTCATT  150

seq1  TCTCACATAAGCTGCTGGGAATCTGACTGAGTGAGGGCCACTAGGGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACATAAGCTGCTGGGAATCTGACTGAGTGAGGGCCACTAGGGTTCT  200

seq1  TCCCATGTCAGCCTACACGTGGCCCAGGACCCTCTAGGCCTGAGCTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGTCAGCCTACACGTGGCCCAGGACCCTCTAGGCCTGAGCTCCAG  250

seq1  GTATTTCCTAGGACTGGAGTCTGGCGAGTCTAGAGATTTGGCGTTGCCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCCTAGGACTGGAGTCTGGCGAGTCTAGAGATTTGGCGTTGCCGG  300

seq1  TATGATACCTGGCATGAGGCAGGCACTCAGCGTTCAGCTGAGTGGGTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATACCTGGCATGAGGCAGGCACTCAGCGTTCAGCTGAGTGGGTGGG  350

seq1  GTGGAGGGGCAGGGCAGTGGGGTTCAGAGTCCTGGTTCTGAACAGGGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGGGCAGGGCAGTGGGGTTCAGAGTCCTGGTTCTGAACAGGGTCT  400

seq1  GGTCTCATGACAGGAACATTTGGCCTGAATCTCTGGAAGAGACTGCAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCATGACAGGAACATTTGGCCTGAATCTCTGGAAGAGACTGCAAGA  450

seq1  GGCTGCGATGGTGGATGAACTGGAGCAGGGGGCAAGTTTGGAGAAGAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCGATGGTGGATGAACTGGAGCAGGGGGCAAGTTTGGAGAAGAAGC  500

seq1  CTGCTACAACCGGTGCCACCCTGAAGCACTCCTTCCTAGAGATGGAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTACAACCGGTGCCACCCTGAAGCACTCCTTCCTAGAGATGGAGTGA  550

seq1  GTTCCTGGAGCCAACCTGGGGCTCCCTGGCCCCAGCCTGGCATGGCATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGGAGCCAACCTGGGGCTCCCTGGCCCCAGCCTGGCATGGCATGA  600

seq1  GAAGCTTAGGGTCCGAAGGCAACGTGTGGCCCCATTCAGCCATCTCAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTAGGGTCCGAAGGCAACGTGTGGCCCCATTCAGCCATCTCAGTG  650

seq1  CCCAAACCAAGCAGTCAGGAATGTTGTGTTTTATAACAAGAAAGGAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACCAAGCAGTCAGGAATGTTGTGTTTTATAACAAGAAAGGAAAGG  700

seq1  CCAGGAATATGTTTGGTGGAGGTACGGTAT-GGTGTGCGGGAAGGGGGT  748
      |||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCAGGAATATGTTTGGTGGAGGTACGGTATGGGTGTGCGGGAAGGGGGT  749

seq1: chr2_153814543_153815078
seq2: B6Ng01-263M18.g_68_603 (reverse)

seq1  CACACACACACATTCGACATGGGTGGTTGTAAGTGTGCATATAAGTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACATTCGACATGGGTGGTTGTAAGTGTGCATATAAGTCCAG  50

seq1  GAGGAGATATTAATATGAGAGATGTGCATGAGTTTGGCAGAGCTCTAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGATATTAATATGAGAGATGTGCATGAGTTTGGCAGAGCTCTAGGC  100

seq1  AGACAGAGAAAGAAGTAGCCTTTCACTAGACTCATTTTTAAAATGAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGAAAGAAGTAGCCTTTCACTAGACTCATTTTTAAAATGAGTCT  150

seq1  TGAGCTATGCATAAGCATTTACTTCAATAGATTATTTCATTGAATATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTATGCATAAGCATTTACTTCAATAGATTATTTCATTGAATATATA  200

seq1  TATATATGTATTTGATATATATATATATATATATAATTAAAATATAGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGTATTTGATATATATATATATATATATAATTAAAATATAGGCC  250

seq1  ATCAGGAATCCTTTTTTTTTAAAGTATGTGTATCAGTTACCTCTCAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGAATCCTTTTTTTTTAAAGTATGTGTATCAGTTACCTCTCAGCCA  300

seq1  TAAATGCCCAGACCTGTTTGCAAGTCCCAGTGAAACCTTTTAGAGTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCCCAGACCTGTTTGCAAGTCCCAGTGAAACCTTTTAGAGTATTA  350

seq1  TTCCCAGACATGCATTCAGCTTCTAACAGCCCTCTCCCACGCAACTAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGACATGCATTCAGCTTCTAACAGCCCTCTCCCACGCAACTAGGA  400

seq1  TACTCTCATTTCTCAGTGGCTCCACAGTGGATGTGGACATCGAGATCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCATTTCTCAGTGGCTCCACAGTGGATGTGGACATCGAGATCCCC  450

seq1  TTGCAATTGCAACAGATGGAACCTGGTCAAATGTCCTTTTCCGTGAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAATTGCAACAGATGGAACCTGGTCAAATGTCCTTTTCCGTGAAGAG  500

seq1  CTGCCGGGCAGTATTCACTGGGATCCAAGTGAATTC  536
      ||||||||||||||||||||||||||||||||||||
seq2  CTGCCGGGCAGTATTCACTGGGATCCAAGTGAATTC  536