BAC Information

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BAC

Clone NameB6Ng01-264B24
Chromosome2 (Build37)
Map Location 143,738,588 - 143,912,651
singlet/doubletdoublet
Overlap geneDstn, Rrbp1, 4930517K23Rik
Upstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534
Downstream geneLOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik, Polr3f, Rbbp9, Sec23b, Gm561, Dtd1, 1700010M22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264B24.bB6Ng01-264B24.g
ACCGA068111GA068112
length678817
definitionB6Ng01-264B24.b B6Ng01-264B24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(143,738,588 - 143,739,263)(143,911,840 - 143,912,651)
sequence
gaattcaaatgaaatcactcctgtgttcaaagatccagtgcccaaaaact
ttctaaatgagacaaatggcacccacccatctcctattcactgacattta
tgccttgctgagctgctgtgatagactgacttactgtaaacagaacaaca
gcaacttctcatggttctgtaagcttgggaagtccagtatcaagggacca
gtagattcagtgtctggtgaggaaccatcccctgccccaccccagggttt
ctctgtgtagccctggctatcctagaacttgctctgtagactaagacaag
gctggcctcgaactcagagccctgcctgcctctacttcccagtgctggca
ttaaaggcgtgggccactactgaccggcagaaccatttctttattcatac
actgcgatcttctcccactcttgtaagctctgacctgacaacctaggtta
gcttaaagaccgactttcaaatagtattacatcacattgggaattaggtt
tcaacatttggtcaatatagcattttattaaaatttgatccttctcagaa
tgagaagaataaaaatagctagagcaactgggggtaaatgtgggggttaa
agtttcggtgggagttcatttgacgttacggtgagtagatacatttattt
gtctgacaaatctctaaaccattttcag
gaattccaggatattccagtcagaagttaggaggctgaatctctgaggcc
aatctcggtgggaaccatattttatagaccttatgggggagggcaaggca
ctggctgtgcggggtagggcaggggtgtgcgggctgcgggtgggagcggg
gcgtggacccggtgagggaggaatgcagtgtgagtttgtgattcagatga
gcgctgagcttgtttttttttttttttttttttttttggtgcagatttga
ccctgagaccattcattgtgggactttgttcatcgacttgtgggcacttt
aaaaacatgaccatattgggcttgggaatttgctcctcagctacagtaga
aagtccaggggcttgggcggaagtgtggtacaatggggaggctccacagg
gactccctgcggtgcctggctgggccagggaagggatttccctgcgtctg
ctgagacctgcctttccggtccccaggcctgtgtttgcagcacagcctct
tccagaggctactgccttccaaggactgtgggcagccgtccttgtccaca
aggccaggggagccagcacggggaggtcccagggagacggatgccctggt
gggttcccctccccgagaacccaggaagcatctgcaccccttccagaagc
cgacctttgttctcccgggtcacagactggctttatctggcagggtttgc
ctagtccaagtttcatttaaggagcagggacaaacaactccaaaggaagc
tgcctcccagtttacttcagagtcagggaaaaaaagagaactgatgggga
gctgggtaggagacgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_143738588_143739263
seq2: B6Ng01-264B24.b_45_722

seq1  GAATTCAAATGAAATCACTCCTGTGTTCAAAGATCCAGTGCCCAAAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGAAATCACTCCTGTGTTCAAAGATCCAGTGCCCAAAAACT  50

seq1  TTCTAAATGAGACAAATGGCACCCACCCATCTCCTATTCACTGACATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATGAGACAAATGGCACCCACCCATCTCCTATTCACTGACATTTA  100

seq1  TGCCTTGCTGAGCTGCTGTGATAGACTGACTTACTGTAAACAGAACAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGCTGAGCTGCTGTGATAGACTGACTTACTGTAAACAGAACAACA  150

seq1  GCAACTTCTCATGGTTCTGTAAGCTTGGGAAGTCCAGTATCAAGGGACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTCTCATGGTTCTGTAAGCTTGGGAAGTCCAGTATCAAGGGACCA  200

seq1  GTAGATTCAGTGTCTGGTGAGGAACCATCCCCTGCCCCACCCCAGGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTCAGTGTCTGGTGAGGAACCATCCCCTGCCCCACCCCAGGGTTT  250

seq1  CTCTGTGTAGCCCTGGCTATCCTAGAACTTGCTCTGTAGACTAAGACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTAGCCCTGGCTATCCTAGAACTTGCTCTGTAGACTAAGACAAG  300

seq1  GCTGGCCTCGAACTCAGAGCCCTGCCTGCCTCTACTTCCCAGTGCTGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTCGAACTCAGAGCCCTGCCTGCCTCTACTTCCCAGTGCTGGCA  350

seq1  TTAAAGGCGTGGGCCACTACTGACCGGCAGAACCATTTCTTTATTCATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGCGTGGGCCACTACTGACCGGCAGAACCATTTCTTTATTCATAC  400

seq1  ACTGCGATCTTCTCCCACTCTTGTAAGCTCTGACCTGACAACCTAGGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCGATCTTCTCCCACTCTTGTAAGCTCTGACCTGACAACCTAGGTTA  450

seq1  GCTTAAAGACCGACTTTCAAATAGTATTACATCACATTGGGAATTAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAAGACCGACTTTCAAATAGTATTACATCACATTGGGAATTAGGTT  500

seq1  TCAACATTTGGTCAATATAGCATTTTATTAAAATTTGATCCTTCTCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATTTGGTCAATATAGCATTTTATTAAAATTTGATCCTTCTCAGAA  550

seq1  TGAGAAGAATAAAAATAGCTAGAGCAACTGGGGGTAAATGTGGGGGTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGAATAAAAATAGCTAGAGCAACTGGGGGTAAATGTGGGGGTTAA  600

seq1  AG-TTCGGTGGGAGTTCATTTGAGGTTACGGTGAGCAGATACATTAATTT  649
      || |||||||||||||||||||| ||||||||||| ||||||||| ||||
seq2  AGTTTCGGTGGGAGTTCATTTGACGTTACGGTGAGTAGATACATTTATTT  650

seq1  GTCTGACAAATC-CTAAACCATCTTCAG  676
      |||||||||||| ||||||||| |||||
seq2  GTCTGACAAATCTCTAAACCATTTTCAG  678

seq1: chr2_143911840_143912651
seq2: B6Ng01-264B24.g_69_885 (reverse)

seq1  AGCGTCTCCTA-CCAGCTCCCCATCAGTTCTCTTTTTTT-CCTGACTCTG  48
      ||||||||||| ||||||||||||||||||||||||||| ||||||||||
seq2  AGCGTCTCCTACCCAGCTCCCCATCAGTTCTCTTTTTTTCCCTGACTCTG  50

seq1  AAGTAAACTGGGAGGCAGCTTCCTTTGGAGTTGTTTGT-CCTGCTCCTT-  96
      |||||||||||||||||||||||||||||||||||||| |||||||||| 
seq2  AAGTAAACTGGGAGGCAGCTTCCTTTGGAGTTGTTTGTCCCTGCTCCTTA  100

seq1  AATGAAACTTGGACTAGGCAAACCCTGCCAGAT-AAGCCAGTCTGTGACC  145
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATGAAACTTGGACTAGGCAAACCCTGCCAGATAAAGCCAGTCTGTGACC  150

seq1  CGGGAGAACAAAGGTCGGCTTCTGGAAGGGGTGCAGATGCTTCCTGGGTT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGAACAAAGGTCGGCTTCTGGAAGGGGTGCAGATGCTTCCTGGGTT  200

seq1  CTCGGGGAGGGGAACCCACCAGGGCATCCGTCTCCCTGGGACCTCCCCGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGGAGGGGAACCCACCAGGGCATCCGTCTCCCTGGGACCTCCCCGT  250

seq1  GCTGGCTCCCCTGGCCTTGTGGACAAGGACGGCTGCCCACAGTCCTTGGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTCCCCTGGCCTTGTGGACAAGGACGGCTGCCCACAGTCCTTGGA  300

seq1  AGGCAGTAGCCTCTGGAAGAGGCTGTGCTGCAAACACAGGCCTGGGGACC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTAGCCTCTGGAAGAGGCTGTGCTGCAAACACAGGCCTGGGGACC  350

seq1  GGAAAGGCAGGTCTCAGCAGACGCAGGGAAATCCCTTCCCTGGCCCAGCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGCAGGTCTCAGCAGACGCAGGGAAATCCCTTCCCTGGCCCAGCC  400

seq1  AGGCACCGCAGGGAGTCCCTGTGGAGCCTCCCCATTGTACCACACTTCCG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACCGCAGGGAGTCCCTGTGGAGCCTCCCCATTGTACCACACTTCCG  450

seq1  CCCAAGCCCCTGGACTTTCTACTGTAGCTGAGGAGCAAATTCCCAAGCCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGCCCCTGGACTTTCTACTGTAGCTGAGGAGCAAATTCCCAAGCCC  500

seq1  AATATGGTCATGTTTTTAAAGTGCCCACAAGTCGATGAACAAAGTCCCAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGTCATGTTTTTAAAGTGCCCACAAGTCGATGAACAAAGTCCCAC  550

seq1  AATGAATGGTCTCAGGGTCAAATCTGCACCAAAAAAAAAAAAAAAAAAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGGTCTCAGGGTCAAATCTGCACCAAAAAAAAAAAAAAAAAAAA  600

seq1  AAAAACAAGCTCAGCGCTCATCTGAATCACAAACTCACACTGCATTCCTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAGCTCAGCGCTCATCTGAATCACAAACTCACACTGCATTCCTC  650

seq1  CCTCACCGGGTCCACGCCCCGCTCCCACCCGCAGCCCGCACACCCCTGCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCGGGTCCACGCCCCGCTCCCACCCGCAGCCCGCACACCCCTGCC  700

seq1  CTACCCCGCACAGCCAGTGCCTTGCCCTCCCCCATAAGGTCTATAAAATA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCCGCACAGCCAGTGCCTTGCCCTCCCCCATAAGGTCTATAAAATA  750

seq1  TGGTTCCCACCGAGATTGGCCTCAGAGATTCAGCCTCCTAACTTCTGACT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCCACCGAGATTGGCCTCAGAGATTCAGCCTCCTAACTTCTGACT  800

seq1  GGAATATCCTGGAATTC  812
      |||||||||||||||||
seq2  GGAATATCCTGGAATTC  817