BAC Information

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BAC

Clone NameB6Ng01-264G13
Chromosome2 (Build37)
Map Location 91,492,387 - 91,626,775
singlet/doubletdoublet
Overlap geneArhgap1, D2Ertd391e, LOC100043179, D230010M03Rik, D030051N19Rik
Upstream geneNup160, Fnbp4, Rpl30-ps3, Agbl2, Mtch2, C1qtnf4, Ndufs3, Kbtbd4, Ptpmt1, Cugbp1, LOC279067, Rapsn, Psmc3, Slc39a13, Sfpi1, Mybpc3, Madd, Nr1h3, Acp2, Ddb2, Pacsin3, Zfp289, 1110051M20Rik, Lrp4, LOC619941, Ckap5, F2, Zfp408
Downstream geneChrm4, Mdk, Dgkz, Creb3l1, Phf21a, Gyltl1b, Pex16, 1700029I15Rik, Mapk8ip1, Cry2, Slc35c1, LOC100042775, LOC100043205, Chst1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264G13.bB6Ng01-264G13.g
ACCGA068322GA068323
length1,187797
definitionB6Ng01-264G13.b B6Ng01-264G13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,625,586 - 91,626,775)(91,492,387 - 91,493,183)
sequence
gaattcactctgtagaccaggctatcctcaaattcagacattcaggtact
gaaggcttgtcttaacacattcggctcttatgcctactcttggccactga
aaagtcttacaagagatgaggtccacccaccctctctctctcacacacac
acagaaagagacagagatagagaggccaaccctgtcacactaaaccgtat
gaacacacaccaaaaaaacaaaacaaaaaattcttactacctacaaaacc
caaaatatttaccttgtcaatgtttatcttgtcctgtacagaaagtttgc
caaccctaatgtgaaagaagaaaaatgatcacacctagaattcagactga
ctgagatagtttaatggtagagcatctgcttagcaaacaggactgtgtga
tcaactgacagcatttgcccatacctgtaaacctaaagcttgggagagta
actcaggagaacaacctggttaggtttttttctcaaaacactaaacaaac
cttaaagtaggtaaacagaaaaagtaagaaagaataacatcaaattatac
ctctcctctacctattcttaccaaagaatattaccaaagagcattgagtt
gcctacctggtataagagactaggtaggcagtctagtcttataactagca
aacagctgtctggatgttcgcagtcgtttcataagacaaagcctgtgtgg
tctgatgtcagagatgctaggcatttctcttgtgagcatgagagtacaga
aagtacgtaacacctggatttaggatcaataggaatattcctcaaatact
gatctttgaaattatgttcaataagataaaacaggaaatagaagaaattt
taggtcatcttaaactagtaataataaatactctataattatcatttgcc
attatcagttataattattggccctggcaattccacttccagaaatttat
ctttctgtaaatatatgtatgaacatacaatcatgtccagcagtaaataa
agaaaatggaaggcatccaggtcacatcacagggaacaaaataaactact
gctagaaatactggtgccaatgtcaactatcaacgttggaaccatgccca
tacagtatgagataggtgacaggcagaactgtgctggctggtatggaaca
ctggggtgacacaggattgttcaacaggtgtgttatc
gaattctctggggtagctgggagggaagatccaggactccttgagcctgg
gcaggaataggaatggagagaagacttttaggcaggaggaggttgctgga
ctctgtcctataacagccagtggttctcagccttcttaatgctgtgatcc
tttgatacagttcctcatgttgtgatgatgccccccagctataaaattgt
ttttgtcaatacttcataattgtaatttttccactgtaatgagttgtaac
gtaaatatcagtgtttcccactggtcttagacgacccccgtgaaagtgtc
agttgatcccaaaaggagttatgacccataggttgagacctatggttaga
agctcctgtttgaagcctccctataacctcttggttgaatggggaggcgt
aggtgggtcagaggtaaattcctcgaaactgaagattgtctggttggagg
atgcagggttgaagggggaaaggaagatgtgggctttgggcaaaggccaa
tattactcactaagaggaatgctttcccaaatatgacagggttgtccttt
gtgtccctagggaggaacctatattttggtggtcagcagaggtagtgggt
aaggctgagggacaagcaaagagaaagaacaagcaaaaaagggggggttt
ggtcaaaaaagggggctttgaaagcttgaaacagctcttctactgactca
gtatgttgccatggtaacaaggcagttgttgcttcggccctgggagctgg
ttcaccattcagagccctaagctgtaatgtgtgggggagtagaggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_91625586_91626775
seq2: B6Ng01-264G13.b_48_1234 (reverse)

seq1  GATA--ACAACTG-TGAACAATCCTGTGTCACCCAGTTGTTTTCTATACA  47
      ||||  ||| ||| ||||||||||||||||||||    || ||| |||| 
seq2  GATAACACACCTGTTGAACAATCCTGTGTCACCC--CAGTGTTCCATACC  48

seq1  GACAAACACAGTTCTTTCCTTGGTCACTTAATTCTCATACTGTATGGGGC  97
        | | |||||||| | |||  ||||| ||  ||||||||||||| ||||
seq2  AGCCAGCACAGTTC-TGCCT--GTCACCTA--TCTCATACTGTAT-GGGC  92

seq1  ATGTTTCCACGTTTGATAGTTTGACATTGGCA-CAGTA-TTCTAGCAGTA  145
      ||| |||||   ||||||| |||||||||||| ||||| |||||||||||
seq2  ATGGTTCCAACGTTGATAG-TTGACATTGGCACCAGTATTTCTAGCAGTA  141

seq1  GTT--ATTTGTTCCCTGTGATGTGACCTGGATGGCTTCCA-TTTCTTTAT  192
      |||   ||||||||||||||||||||||||||| |||||| |||||||||
seq2  GTTTATTTTGTTCCCTGTGATGTGACCTGGATGCCTTCCATTTTCTTTAT  191

seq1  TGTACTGCTGGGACATGATTTGTATGTTCATACATATATTTACAG-AAGA  241
      | ||||||| |||||||| |||||||||||||||||||||||||| ||||
seq2  T-TACTGCT-GGACATGA-TTGTATGTTCATACATATATTTACAGAAAGA  238

seq1  TAAATTTCTGGAAGTGGAATTGCCAGGGCCAATAATTATAACTGATAATG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTCTGGAAGTGGAATTGCCAGGGCCAATAATTATAACTGATAATG  288

seq1  GCAAATGATAATTATAGAGTATTTATTATTACTAGTTTAAGATGACCTAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGATAATTATAGAGTATTTATTATTACTAGTTTAAGATGACCTAA  338

seq1  AATTTCTTCTATTTCCTGTTTTATCTTATTGAACATAATTTCAAAGATCA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTCTATTTCCTGTTTTATCTTATTGAACATAATTTCAAAGATCA  388

seq1  GTATTTGAGGAATATTCCTATTGATCCTAAATCCAGGTGTTACGTACTTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGAGGAATATTCCTATTGATCCTAAATCCAGGTGTTACGTACTTT  438

seq1  CTGTACTCTCATGCTCACAAGAGAAATGCCTAGCATCTCTGACATCAGAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTCTCATGCTCACAAGAGAAATGCCTAGCATCTCTGACATCAGAC  488

seq1  CACACAGGCTTTGTCTTATGAAACGACTGCGAACATCCAGACAGCTGTTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGGCTTTGTCTTATGAAACGACTGCGAACATCCAGACAGCTGTTT  538

seq1  GCTAGTTATAAGACTAGACTGCCTACCTAGTCTCTTATACCAGGTAGGCA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTTATAAGACTAGACTGCCTACCTAGTCTCTTATACCAGGTAGGCA  588

seq1  ACTCAATGCTCTTTGGTAATATTCTTTGGTAAGAATAGGTAGAGGAGAGG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATGCTCTTTGGTAATATTCTTTGGTAAGAATAGGTAGAGGAGAGG  638

seq1  TATAATTTGATGTTATTCTTTCTTACTTTTTCTGTTTACCTACTTTAAGG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTTGATGTTATTCTTTCTTACTTTTTCTGTTTACCTACTTTAAGG  688

seq1  TTTGTTTAGTGTTTTGAGAAAAAAACCTAACCAGGTTGTTCTCCTGAGTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTAGTGTTTTGAGAAAAAAACCTAACCAGGTTGTTCTCCTGAGTT  738

seq1  ACTCTCCCAAGCTTTAGGTTTACAGGTATGGGCAAATGCTGTCAGTTGAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCCAAGCTTTAGGTTTACAGGTATGGGCAAATGCTGTCAGTTGAT  788

seq1  CACACAGTCCTGTTTGCTAAGCAGATGCTCTACCATTAAACTATCTCAGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGTCCTGTTTGCTAAGCAGATGCTCTACCATTAAACTATCTCAGT  838

seq1  CAGTCTGAATTCTAGGTGTGATCATTTTTCTTCTTTCACATTAGGGTTGG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGAATTCTAGGTGTGATCATTTTTCTTCTTTCACATTAGGGTTGG  888

seq1  CAAACTTTCTGTACAGGACAAGATAAACATTGACAAGGTAAATATTTTGG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTCTGTACAGGACAAGATAAACATTGACAAGGTAAATATTTTGG  938

seq1  GTTTTGTAGGTAGTAAGAATTTTTTGTTTTGTTTTTTTGGTGTGTGTTCA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTAGGTAGTAAGAATTTTTTGTTTTGTTTTTTTGGTGTGTGTTCA  988

seq1  TACGGTTTAGTGTGACAGGGTTGGCCTCTCTATCTCTGTCTCTTTCTGTG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGTTTAGTGTGACAGGGTTGGCCTCTCTATCTCTGTCTCTTTCTGTG  1038

seq1  TGTGTGTGAGAGAGAGAGGGTGGGTGGACCTCATCTCTTGTAAGACTTTT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGAGAGAGAGAGGGTGGGTGGACCTCATCTCTTGTAAGACTTTT  1088

seq1  CAGTGGCCAAGAGTAGGCATAAGAGCCGAATGTGTTAAGACAAGCCTTCA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCCAAGAGTAGGCATAAGAGCCGAATGTGTTAAGACAAGCCTTCA  1138

seq1  GTACCTGAATGTCTGAATTTGAGGATAGCCTGGTCTACAGAGTGAATTC  1190
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTGAATGTCTGAATTTGAGGATAGCCTGGTCTACAGAGTGAATTC  1187

seq1: chr2_91492387_91493183
seq2: B6Ng01-264G13.g_67_863

seq1  GAATTCTCTGGGGTAGCTGGGAGGGAAGATCCAGGACTCCTTGAGCCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGGGTAGCTGGGAGGGAAGATCCAGGACTCCTTGAGCCTGG  50

seq1  GCAGGAATAGGAATGGAGAGAAGACTTTTAGGCAGGAGGAGGTTGCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAATAGGAATGGAGAGAAGACTTTTAGGCAGGAGGAGGTTGCTGGA  100

seq1  CTCTGTCCTATAACAGCCAGTGGTTCTCAGCCTTCTTAATGCTGTGATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCCTATAACAGCCAGTGGTTCTCAGCCTTCTTAATGCTGTGATCC  150

seq1  TTTGATACAGTTCCTCATGTTGTGATGATGCCCCCCAGCTATAAAATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATACAGTTCCTCATGTTGTGATGATGCCCCCCAGCTATAAAATTGT  200

seq1  TTTTGTCAATACTTCATAATTGTAATTTTTCCACTGTAATGAGTTGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCAATACTTCATAATTGTAATTTTTCCACTGTAATGAGTTGTAAC  250

seq1  GTAAATATCAGTGTTTCCCACTGGTCTTAGACGACCCCCGTGAAAGTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATATCAGTGTTTCCCACTGGTCTTAGACGACCCCCGTGAAAGTGTC  300

seq1  AGTTGATCCCAAAAGGAGTTATGACCCATAGGTTGAGACCTATGGTTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATCCCAAAAGGAGTTATGACCCATAGGTTGAGACCTATGGTTAGA  350

seq1  AGCTCCTGTTTGAAGCCTCCCTATAACCTCTTGGTTGAATGGGGAGGCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTGTTTGAAGCCTCCCTATAACCTCTTGGTTGAATGGGGAGGCGT  400

seq1  AGGTGGGTCAGAGGTAAATTCCTCGAAACTGAAGATTGTCTGGTTGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGTCAGAGGTAAATTCCTCGAAACTGAAGATTGTCTGGTTGGAGG  450

seq1  ATGCAGGGTTGAAGGGGGAAAGGAAGATGTGGGCTTTGGGCAAAGGCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGGTTGAAGGGGGAAAGGAAGATGTGGGCTTTGGGCAAAGGCCAA  500

seq1  TATTACTCACTAAGAGGAATGCTTTCCCAAATATGACAGGGTTGTCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTCACTAAGAGGAATGCTTTCCCAAATATGACAGGGTTGTCCTTT  550

seq1  GTGTCCCTAGGGAGGAACCTATATTTTGGTGGTCAGCAGAGGTAGTGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCCTAGGGAGGAACCTATATTTTGGTGGTCAGCAGAGGTAGTGGGT  600

seq1  AAGGCTGAGGGACAAGCAAAGAGAAAGAACAAGCAAAAAAGGGGGGGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGAGGGACAAGCAAAGAGAAAGAACAAGCAAAAAAGGGGGGGTTT  650

seq1  GGTCAAAAAAGGGGGCTTTGAAAGCTTGAAACAGCTCTTCTACTGACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAAAAAGGGGGCTTTGAAAGCTTGAAACAGCTCTTCTACTGACTCA  700

seq1  GTATGTTGCCATGGTAACAAGGCAGTTGTTGCTTCGGCCCTGGGAGCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTGCCATGGTAACAAGGCAGTTGTTGCTTCGGCCCTGGGAGCTGG  750

seq1  TTCACCATTCAGAGCCCTAAGCTGTAATGTGTGGGGGAGTAGAGGTT  797
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCATTCAGAGCCCTAAGCTGTAATGTGTGGGGGAGTAGAGGTT  797