BAC Information

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BAC

Clone NameB6Ng01-264M07
Chromosome2 (Build37)
Map Location 76,472,381 - 76,614,998
singlet/doubletdoublet
Overlap genePrkra, Dfnb59, Fkbp7, Plekha3, Ttn
Upstream geneLOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1, Osbpl6
Downstream gene2610301F02Rik, Sestd1, LOC623706, LOC667906, Zfp533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264M07.bB6Ng01-264M07.g
ACCGA068588GA068589
length9331,145
definitionB6Ng01-264M07.b B6Ng01-264M07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,472,381 - 76,473,313)(76,613,856 - 76,614,998)
sequence
gaattctttgcttgttttagttatgttgattttattcatacttttttggc
tgtatcgtaagttctagtcaaattcatttgcttcagattttagatgttaa
gttacagttaaaaaagactttctatccctaagattcttttcaaaagaccg
tttgtgtttgccaagacagttctattcatgctcaatccttgatctgggat
ttacttaggcacgaggtttggtatggggatatgccatctatttacacaag
gacacacagacaaatgcactatctcccatcctcgcccatggctgtcagct
gtctacactgtacctggaccatcccatcctcacctgtctgtcagctgtcc
acactgtacctgatcttctaaaatccccttgctgccatcacgaggtggcc
atgcacttgcaccaactcctgagccgtgttccgctctcccaccagtaacc
tgctttatcacaggtccacactctgcattattctcagagggcgagcaccc
tagcccaccttaaattcttgctttctaggtgctgtgctcaagcatttgtt
ttctcctttttccagacaagctttgtaaggtcctgctgagctccaaactg
aattctggcagttaagagtaagacagcttacagttttatgtttactatac
tgagtctctgtatgaaaagaagaaacagggccatgttaatttaatttcca
ttatattcttctgtagggtttcgacgtatttctacatgaatccttgcaaa
tgtctattcaagtttaccccagatattgaaaatagctcttggctttataa
ataagaaaattgttgattttttttctagtatatcttttttttgtttcttc
agacaatttttccatgaagtacgtgtttttatttgtaaattttaaatttt
ggttgtgtgtgtatgtggtgtatgtttgtgtgg
gaattcatggaagttgaagaaggaactgatgttaacattgtggccaaaat
caaaggtgtgccgttcccaactctcacctggttcaaggctccgccaaaga
aacccgacagcaaagagcctgttgtttatgacacccatgtcaacaaacag
gtggtggatgacacttgcactttagtcattcctcagtctcgccggagtga
cactggcttatattctatcacagccgtaaacaacctggggacagcatcaa
aggagatgagactcaatgtccttggtaaagattgtactgtttggttaaaa
catggttttgttaatcataaataaaatttggctttaaaatcattcaacta
acaaaatattcttttttaaaaaaaattttttttgtaggtcgtcctggccc
ccctgtgggacccataaagtttgaatctatttcagcggatcagatgacat
tatcttggcttccacctaaagatgacggtgggtctaagattacaaactat
gtcattgagaaaagagaagccaacagaaagacatgggtacgtgtctccag
tgaacctaaagaatgcatgtacacaattcccaaattgctagaaggccatg
aatacgtcttccgaatcatggcccagaataagtacggcattggagagcca
cttgacagtgaacctgagacagcacggaacctcttctgtgagtaggatgc
cattttctcaagtgatgtcatcctctttatgtttgtttttgtttttaata
actgcttgccaattaataaaattaatacatcctcacagctgtccctggag
ctccagataaaccaacagtgagcagcgtcactcgcaactccatgactgtc
aactgggaagagccggaatatgatggaggctctcctgtgacaggtactgg
ttagaaatgaaagacaccacttcaaagagatggaagagagttaaccgaga
tcccatcaaagccatgactctaggtgttttcttacaaagtgactgggcct
taatgaaggatcagactatcagtttccgggtatatgcaatcaatgccgct
gtgtggggttcagcagtcttccctcagattcaagtgactgctagagatcc
aggttggtaagactttaaacaattctaaaaaacaaaaccaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76472381_76473313
seq2: B6Ng01-264M07.b_47_979

seq1  GAATTCTTTGCTTGTTTTAGTTATGTTGATTTTATTCATACTTTTTTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCTTGTTTTAGTTATGTTGATTTTATTCATACTTTTTTGGC  50

seq1  TGTATCGTAAGTTCTAGTCAAATTCATTTGCTTCAGATTTTAGATGTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCGTAAGTTCTAGTCAAATTCATTTGCTTCAGATTTTAGATGTTAA  100

seq1  GTTACAGTTAAAAAAGACTTTCTATCCCTAAGATTCTTTTCAAAAGACCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGTTAAAAAAGACTTTCTATCCCTAAGATTCTTTTCAAAAGACCG  150

seq1  TTTGTGTTTGCCAAGACAGTTCTATTCATGCTCAATCCTTGATCTGGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTTTGCCAAGACAGTTCTATTCATGCTCAATCCTTGATCTGGGAT  200

seq1  TTACTTAGGCACGAGGTTTGGTATGGGGATATGCCATCTATTTACACAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAGGCACGAGGTTTGGTATGGGGATATGCCATCTATTTACACAAG  250

seq1  GACACACAGACAAATGCACTATCTCCCATCCTCGCCCATGGCTGTCAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACAGACAAATGCACTATCTCCCATCCTCGCCCATGGCTGTCAGCT  300

seq1  GTCTACACTGTACCTGGACCATCCCATCCTCACCTGTCTGTCAGCTGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACACTGTACCTGGACCATCCCATCCTCACCTGTCTGTCAGCTGTCC  350

seq1  ACACTGTACCTGATCTTCTAAAATCCCCTTGCTGCCATCACGAGGTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTACCTGATCTTCTAAAATCCCCTTGCTGCCATCACGAGGTGGCC  400

seq1  ATGCACTTGCACCAACTCCTGAGCCGTGTTCCGCTCTCCCACCAGTAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTTGCACCAACTCCTGAGCCGTGTTCCGCTCTCCCACCAGTAACC  450

seq1  TGCTTTATCACAGGTCCACACTCTGCATTATTCTCAGAGGGCGAGCACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTATCACAGGTCCACACTCTGCATTATTCTCAGAGGGCGAGCACCC  500

seq1  TAGCCCACCTTAAATTCTTGCTTTCTAGGTGCTGTGCTCAAGCATTTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCACCTTAAATTCTTGCTTTCTAGGTGCTGTGCTCAAGCATTTGTT  550

seq1  TTCTCCTTTTTCCAGACAAGCTTTGTAAGGTCCTGCTGAGCTCCAAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTTTTCCAGACAAGCTTTGTAAGGTCCTGCTGAGCTCCAAACTG  600

seq1  AATTCTGGCAGTTAAGAGTAAGACAGCTTACAGTTTTATGTTTACTATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGCAGTTAAGAGTAAGACAGCTTACAGTTTTATGTTTACTATAC  650

seq1  TGAGTCTCTGTATGAAAAGAAGAAACAGGGCCATGTTAATTTAATTTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTCTGTATGAAAAGAAGAAACAGGGCCATGTTAATTTAATTTCCA  700

seq1  TTATATTCTTCTGTAGGGTTTCGACGTATTTCTACATGAATCCTTGCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTCTTCTGTAGGGTTTCGACGTATTTCTACATGAATCCTTGCAAA  750

seq1  TGTCTATTCAAGTTTACCCCAGATATTGAAAATAGCTCTTGGCTTTATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATTCAAGTTTACCCCAGATATTGAAAATAGCTCTTGGCTTTATAA  800

seq1  ATAAGAAAATTGTTGA-TTTTTTTCTAGTATATCTTTTTTTTGTTTCTTC  849
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATAAGAAAATTGTTGATTTTTTTTCTAGTATATCTTTTTTTTGTTTCTTC  850

seq1  AGACAATTTTTCCATGAAGTACGTGTTTTTATTTGTAAATTTTAAATTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATTTTTCCATGAAGTACGTGTTTTTATTTGTAAATTTTAAATTTT  900

seq1  GGTTGTGTGTGTATGTGGTGTATGTTGTGTGTGG  933
      |||||||||||||||||||||||||| |||||||
seq2  GGTTGTGTGTGTATGTGGTGTATGTT-TGTGTGG  933

seq1: chr2_76613856_76614998
seq2: B6Ng01-264M07.g_67_1211 (reverse)

seq1  TTTTTTGTTTTTGTTTTTTAAGAATTGTTTAAAGTCTTACCAA-CTGGAT  49
      ||||||| ||||||||||| ||||||||||||||||||||||| ||||||
seq2  TTTTTTGGTTTTGTTTTTT-AGAATTGTTTAAAGTCTTACCAACCTGGAT  49

seq1  CTCTAGCAGTCAC-TGGATCTGAGGGAAGACTTGCTGGACCCACAC-CAG  97
      ||||||||||||| || |||||||||||||| ||||| |||| ||| |||
seq2  CTCTAGCAGTCACTTGAATCTGAGGGAAGAC-TGCTGAACCC-CACACAG  97

seq1  CGGCATTGATTGCATATACCCGG-AACTGATAGTCTGATCCTTCAATAAG  146
      ||||||||||||||||||||||| ||||||||||||||||||||| ||||
seq2  CGGCATTGATTGCATATACCCGGAAACTGATAGTCTGATCCTTCATTAAG  147

seq1  G-CCAGTCACTTTGTAAG-AAACACCTAGAGTCATGGCTTTGATGGGATC  194
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCCCAGTCACTTTGTAAGAAAACACCTAGAGTCATGGCTTTGATGGGATC  197

seq1  TCGGTTAACTCTCTTCCATCTCTTTGAAGTGGTGTCTTTCATTTCTAACC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTAACTCTCTTCCATCTCTTTGAAGTGGTGTCTTTCATTTCTAACC  247

seq1  AGTACCCTGTCACAGGAGAGCCTCCATCATATTCCGGCTCTTCCCAGTTG  294
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTA-CCTGTCACAGGAGAGCCTCCATCATATTCCGGCTCTTCCCAGTTG  296

seq1  ACAGTCATGGAGTTGCGAGTGACGCTGCTCACTGTTGGTTTATCTGGAGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCATGGAGTTGCGAGTGACGCTGCTCACTGTTGGTTTATCTGGAGC  346

seq1  TCCAGGGACAGCTGTGAGGATGTATTAATTTTATTAATTGGCAAGCAGTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGACAGCTGTGAGGATGTATTAATTTTATTAATTGGCAAGCAGTT  396

seq1  ATTAAAAACAAAAACAAACATAAAGAGGATGACATCACTTGAGAAAATGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAACAAAAACAAACATAAAGAGGATGACATCACTTGAGAAAATGG  446

seq1  CATCCTACTCACAGAAGAGGTTCCGTGCTGTCTCAGGTTCACTGTCAAGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTACTCACAGAAGAGGTTCCGTGCTGTCTCAGGTTCACTGTCAAGT  496

seq1  GGCTCTCCAATGCCGTACTTATTCTGGGCCATGATTCGGAAGACGTATTC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCCAATGCCGTACTTATTCTGGGCCATGATTCGGAAGACGTATTC  546

seq1  ATGGCCTTCTAGCAATTTGGGAATTGTGTACATGCATTCTTTAGGTTCAC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTTCTAGCAATTTGGGAATTGTGTACATGCATTCTTTAGGTTCAC  596

seq1  TGGAGACACGTACCCATGTCTTTCTGTTGGCTTCTCTTTTCTCAATGACA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACACGTACCCATGTCTTTCTGTTGGCTTCTCTTTTCTCAATGACA  646

seq1  TAGTTTGTAATCTTAGACCCACCGTCATCTTTAGGTGGAAGCCAAGATAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGTAATCTTAGACCCACCGTCATCTTTAGGTGGAAGCCAAGATAA  696

seq1  TGTCATCTGATCCGCTGAAATAGATTCAAACTTTATGGGTCCCACAGGGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCTGATCCGCTGAAATAGATTCAAACTTTATGGGTCCCACAGGGG  746

seq1  GGCCAGGACGACCTACAAAAAAAATTTTTTTTAAAAAAGAATATTTTGTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGACGACCTACAAAAAAAATTTTTTTTAAAAAAGAATATTTTGTT  796

seq1  AGTTGAATGATTTTAAAGCCAAATTTTATTTATGATTAACAAAACCATGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAATGATTTTAAAGCCAAATTTTATTTATGATTAACAAAACCATGT  846

seq1  TTTAACCAAACAGTACAATCTTTACCAAGGACATTGAGTCTCATCTCCTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCAAACAGTACAATCTTTACCAAGGACATTGAGTCTCATCTCCTT  896

seq1  TGATGCTGTCCCCAGGTTGTTTACGGCTGTGATAGAATATAAGCCAGTGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTGTCCCCAGGTTGTTTACGGCTGTGATAGAATATAAGCCAGTGT  946

seq1  CACTCCGGCGAGACTGAGGAATGACTAAAGTGCAAGTGTCATCCACCACC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCGGCGAGACTGAGGAATGACTAAAGTGCAAGTGTCATCCACCACC  996

seq1  TGTTTGTTGACATGGGTGTCATAAACAACAGGCTCTTTGCTGTCGGGTTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTGACATGGGTGTCATAAACAACAGGCTCTTTGCTGTCGGGTTT  1046

seq1  CTTTGGCGGAGCCTTGAACCAGGTGAGAGTTGGGAACGGCACACCTTTGA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCGGAGCCTTGAACCAGGTGAGAGTTGGGAACGGCACACCTTTGA  1096

seq1  TTTTGGCCACAATGTTAACATCAGTTCCTTCTTCAACTTCCATGAATTC  1143
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCCACAATGTTAACATCAGTTCCTTCTTCAACTTCCATGAATTC  1145