BAC Information

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BAC

Clone NameB6Ng01-265I13
Chromosome2 (Build37)
Map Location 25,453,196 - 25,454,335
singlet/doubletsinglet
Overlap geneB230208H17Rik
Upstream geneCacna1b, Ehmt1, Arrdc1, Zmynd19, Wdr85, Mrpl41, Pnpla7, Nelf, Entpd8, Noxa1, Nrarp, A830007P12Rik, A730008L03Rik, 4933433C11Rik, BC061039, Tubb2c, Slc34a3, Gm757, 2310002J15Rik, Rnf208, LOC100039232, Ndor1, C730025P13Rik, C430004E15Rik, Ssna1, Anapc2, 4930571C24Rik, BC004853, Grin1, Man1b1, Dpp7, Uap1l1, 2010317E24Rik, Entpd2, Npdc1, Fut7, Abca2, Clic3, BC029214, Ptgds, EG665070, Lcn12, C8g, Fbxw5, Traf2, Edf1, Mamdc4, Phpt1, Gm996, LOC100039887
Downstream gene4921530D09Rik, Tmem141, Fcna, Lcn8, Lcn5, LOC620709, Lcn10, Lcn13, Bmyc, LOC383678, Lcn3, Lcn11, LOC620858, Glt6d1, Lcn9, Sohlh1, Kcnt1, Camsap1, LOC100040100, LOC665199, Ubadc1, Btbd14a, C330006A16Rik, Lhx3, Qscn6l1, C030048H21Rik, 4932418E24Rik, Gpsm1, D2Bwg1335e, Card9, Snapc4, Sdccag3, Pmpca, Inpp5e, AU024582, Notch1, Egfl7, Agpat2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265I13.g
ACCGA069158
length1,133
definitionB6Ng01-265I13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccaaggttgtgaagagctcagttggacatttagatgaaaaggag
aagggacagtgatgtcatcttgttgtccctagagtccagtgtcagactgc
tacaggacctgtggttgtctgccagataaaaacacttcagttaccatgaa
caggcagtgtcaggctggacggacacttctccgagtgtgccagtgtctta
gtgatgcagggactgtttaaggaactcagatttggtctccaagctttgac
tgtagaaaccctttatcatgccatcccccacgattccatgagagccaggc
tgtcatgagcaacccctttactcaaggcagacctggatagggactcttcc
ttcccggcctgtcttatcagctgctaagtgctgcatttcctatcctgctc
tgccagcctagccagttcacacagttttgtatctctcaaacatgagtgag
gggtgtctggacctaccaggaggctcttttagattgcaaggctgaatgga
gtgcagtcccacgtggcattaaggcggggaggaggagtctgaggaaggat
actccccacttatgcaaatcctgggcccaaccatttcattcctaattttt
tgtttgtcttttaataaggaaagtgtaaaaaacgaggagatggcttgaag
acggaaaatgacccccaggaggtgagccacattgtcaggtgggtctgtgc
cagtgtcatgagcaaggcgcctgtgggcactctctggcctcctggacaat
cccgtatgctgtagatgcagtagtcactgactgtccttaactactgttga
gactcggtgctgcctgggttaagtttcagggtcactgcctgtttagggtg
cctgccccacgtggtgcctgctctgcttcccacagacatcacagtgaact
gccatgtgaatgggcctattaggaaccatatttacatctctgtcatgtga
ctttgttctttaaagtgctgacatatgtggaggtgtggccatggcaccac
agtgagacaggtggtcttgcttgctccctagaagctagaacacagtgaca
atgtttgtgtatcctttccttcagtgttttagagaatcctgcctgccttc
tccctctttgaggcctggaagttagtgaataca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_25453196_25454335
seq2: B6Ng01-265I13.g_68_1200 (reverse)

seq1  TGTA-TCACTTAAACTTCCA-GCCTCAAAGAGGGAGAAGGCAGGGCAGGG  48
      |||| |||||  |||||||| ||||||||||||||||||||| |||||| 
seq2  TGTATTCACT--AACTTCCAGGCCTCAAAGAGGGAGAAGGCA-GGCAGGA  47

seq1  ATCTCTAAAACAACTGGAAGGAAGGATTACACAAACATGTCCACTGTGTT  98
       |||||||||| ||| ||||||| |  |||||||||||   |||||||||
seq2  TTCTCTAAAAC-ACT-GAAGGAAAGGATACACAAACATTGTCACTGTGTT  95

seq1  CTAGCTTCTAGGGAGCAAGCAAAGACCACCTGGTCTCACCTGTGGTGCCA  148
      |||||||||||||||||||| |||||||||| |||||| |||||||||||
seq2  CTAGCTTCTAGGGAGCAAGC-AAGACCACCT-GTCTCA-CTGTGGTGCCA  142

seq1  TGGCCACACCTCCAACATATGTCAGCACTTTAAAGAACAAAGTCACATGA  198
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGGCCACACCTCC-ACATATGTCAGCACTTTAAAGAACAAAGTCACATGA  191

seq1  CAGAGATGTAAAATATGGTTCCTAATAGG-CCATTCACATGGCAGTTCAC  247
      ||||||||| ||||||||||||||||||| ||||||||||||||||||||
seq2  CAGAGATGT-AAATATGGTTCCTAATAGGCCCATTCACATGGCAGTTCAC  240

seq1  TGTGATGTCTGTGGGAAGCAGAGCAGGCACCACGTGGGGCAGGCACCCTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTCTGTGGGAAGCAGAGCAGGCACCACGTGGGGCAGGCACCCTA  290

seq1  AACAGGCAGTGACCCTGAAACTTAACCCAGGCAGCACCGAGTCTCAACAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCAGTGACCCTGAAACTTAACCCAGGCAGCACCGAGTCTCAACAG  340

seq1  TAGTTAAGGACAGTCAGTGACTACTGCATCTACAGCATACGGGATTGTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAGGACAGTCAGTGACTACTGCATCTACAGCATACGGGATTGTCC  390

seq1  AGGAGGCCAGAGAGTGCCCACAGGCGCCTTGCTCATGACACTGGCACAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCCAGAGAGTGCCCACAGGCGCCTTGCTCATGACACTGGCACAGA  440

seq1  CCCACCTGACAATGTGGCTCACCTCCTGGGGGTCATTTTCCGTCTTCAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTGACAATGTGGCTCACCTCCTGGGGGTCATTTTCCGTCTTCAAG  490

seq1  CCATCTCCTCGTTTTTTACACTTTCCTTATTAAAAGACAAACAAAAAATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCCTCGTTTTTTACACTTTCCTTATTAAAAGACAAACAAAAAATT  540

seq1  AGGAATGAAATGGTTGGGCCCAGGATTTGCATAAGTGGGGAGTATCCTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGAAATGGTTGGGCCCAGGATTTGCATAAGTGGGGAGTATCCTTC  590

seq1  CTCAGACTCCTCCTCCCCGCCTTAATGCCACGTGGGACTGCACTCCATTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTCCTCCTCCCCGCCTTAATGCCACGTGGGACTGCACTCCATTC  640

seq1  AGCCTTGCAATCTAAAAGAGCCTCCTGGTAGGTCCAGACACCCCTCACTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGCAATCTAAAAGAGCCTCCTGGTAGGTCCAGACACCCCTCACTC  690

seq1  ATGTTTGAGAGATACAAAACTGTGTGAACTGGCTAGGCTGGCAGAGCAGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGAGAGATACAAAACTGTGTGAACTGGCTAGGCTGGCAGAGCAGG  740

seq1  ATAGGAAATGCAGCACTTAGCAGCTGATAAGACAGGCCGGGAAGGAAGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAATGCAGCACTTAGCAGCTGATAAGACAGGCCGGGAAGGAAGAG  790

seq1  TCCCTATCCAGGTCTGCCTTGAGTAAAGGGGTTGCTCATGACAGCCTGGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATCCAGGTCTGCCTTGAGTAAAGGGGTTGCTCATGACAGCCTGGC  840

seq1  TCTCATGGAATCGTGGGGGATGGCATGATAAAGGGTTTCTACAGTCAAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGGAATCGTGGGGGATGGCATGATAAAGGGTTTCTACAGTCAAAG  890

seq1  CTTGGAGACCAAATCTGAGTTCCTTAAACAGTCCCTGCATCACTAAGACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGACCAAATCTGAGTTCCTTAAACAGTCCCTGCATCACTAAGACA  940

seq1  CTGGCACACTCGGAGAAGTGTCCGTCCAGCCTGACACTGCCTGTTCATGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACACTCGGAGAAGTGTCCGTCCAGCCTGACACTGCCTGTTCATGG  990

seq1  TAACTGAAGTGTTTTTATCTGGCAGACAACCACAGGTCCTGTAGCAGTCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAAGTGTTTTTATCTGGCAGACAACCACAGGTCCTGTAGCAGTCT  1040

seq1  GACACTGGACTCTAGGGACAACAAGATGACATCACTGTCCCTTCTCCTTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGGACTCTAGGGACAACAAGATGACATCACTGTCCCTTCTCCTTT  1090

seq1  TCATCTAAATGTCCAACTGAGCTCTTCACAACCTTGGGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAAATGTCCAACTGAGCTCTTCACAACCTTGGGAATTC  1133