BAC Information

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BAC

Clone NameB6Ng01-265M04
Chromosome2 (Build37)
Map Location 149,409,094 - 149,410,157
singlet/doubletsinglet
Overlap genenone
Upstream geneNxt1, Gzf1, Napb, Cstl1, Cst11, 8030411F24Rik, Cst12, Cst8, Cst13, Cst9, 9230104L09Rik, Cst3, OTTMUSG00000015744, Gm1330, EG668921, LOC433483, LOC383754, LOC100043593, LOC241715, Cst10
Downstream geneEG667048, C530025M09Rik, OTTMUSG00000015750, LOC279056, Zfp120, EG245174, 3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265M04.bB6Ng01-265M04.g
ACCGA069328GA069329
length1,1991,064
definitionB6Ng01-265M04.b B6Ng01-265M04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctgggagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatgtatatattggatatcagcc
cgctatctgatttaggataggtaaagatcctttcacaatctgttggtggc
ctttttgtcttattgatagtgtcttttgccttgcagaagctttgcaattt
tatcaggtcccatttgtctattctcgatcttacagcacaagccattgctg
ttctattcaggaatttttcccctgtacccatatcttcaaggcttttccct
actttcttctctataagtttcagtgcctctggttttatgtggagttcctt
aatccacttattattgaccttagtacaaggagttaggaaaggatcaattc
gcattcttctacatgataaccaccagttgtgccagcaccatatgttgaaa
atgctgtcttttttccactgggtgatttttgctcccttgtcaaagatcaa
gtgaccataggtgtgtgggttcatttctgggtcttcaattctattccatt
ggtctgtcgctataccagtaccatgcagtttttatcacaattgctctgta
gtacagctttaggtcaggcatggtgattccaccagaggttcttttatcct
tgaaaagagtttttgctatcctaggttttttgttattccagatgaatttg
tagattgccctttctaattcgttgaagaattgagttggaattttgatggg
gattgcattgaatctgtagatcgtttttgacaagatagccaattttacta
tattgatcctgccaatccatgagcatgggagatctttccattttctgaga
tctttcttctttaatttctttcttcagagacatgaagttcttatcataca
gatctttcacttccttagttagattcacgccaaggtattttatactattt
gtgactatgagaagggtgtgtttcctaatttcttctcagcctgtttatct
ttgtgtagaggaaggcattgactgtttggggtattttataatccagctta
ctcacaagcttgtttatcaggtttaggagtcctctggtgatttttaggtt
cactttacataatacctatcatatggatctgccaaaaaggtgaattttga
ctctcgtccaattgatccattgatccttatgtggtccgaaatatgctgg
gaattctgcctgcttcattccaatttgttctctagctccccatggtttgg
cagggtctactactcttcagggacatcttgaacattcatttctgcagtgt
ctgtttttgataattggtgatccctttactgagtactagcagttgaatgc
ttgaaaagaacttactagagtgcagtcatcatgatttttacctgttttca
agtagctcaataggccattgcagcttctttatatttctcagcatgtcagt
cattgaaaactgttggaacgtcttcataagctggaaggtatttatgccag
caaaaccttctagcttttggagcttattgtgagtatcaggagcggactga
atgacaaaggtcaaattcagtgctctattatttttggatcttataggttg
aactctgaaaggactgtgtaccataagaacattctgggagattcctctaa
cccttgtagaaccccagtggacttagacaagttagtggcttttcaaacca
catcccaaatctcaaccaaaaggtaccagggaaaagtgtccaaatctgga
accaatggatgtgtttttattccaatttggacatttggattggaagcttg
tcaaaatcatatagcctcattgtgtctatatgagtaaccaagatcaaaaa
ggccttctgtacctcttcggtgaatgtctaatttagatgatacccatgtt
agaggaaggattgtgcagtttggtgaggaagtattttaatagggtcattc
tagaggaaagagatacaaggagaaaacaaactcatttaagatcatgggaa
tgagtctaaggaaacttgcaaataaaaataaagatcaaaattcatccttt
ttccttctgaagtatatagagttagacggagttaattggcactctctgag
ataggacaatggctgcagaggacatatttagaaaggtcttttagggcttg
gggcttgcaagtatttggggttttccagttatacggacccaaggtagaag
aagggatataaactacaagagcatactgttcttcagattctctctctctc
ctctctctctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_149409094_149410157
seq2: B6Ng01-265M04.g_67_1130 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAATCTGAAGAACAGTAATGCTCTT  50
      |||||||||||||| |||||||||||||||||||||||||| |||||| |
seq2  AGAGAGAGAGAGAG-GAGAGAGAGAGAATCTGAAGAACAGT-ATGCTC-T  47

seq1  TGTAGTTTATATCCCTTC-TCTACCTTGGGTCCGTATAACTGGAAAACCC  99
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGTAGTTTATATCCCTTCTTCTACCTTGGGTCCGTATAACTGGAAAACCC  97

seq1  CAAATACTTGCAAGCCCCAAGCCCTAAAAGACC-TTCTAAATATGTCCTC  148
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAAATACTTGCAAGCCCCAAGCCCTAAAAGACCTTTCTAAATATGTCCTC  147

seq1  TGCAGCCATTGTCCTATCTCAGAGAGTGCCAATTAACTCCGTCTAACTCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCATTGTCCTATCTCAGAGAGTGCCAATTAACTCCGTCTAACTCT  197

seq1  ATATACTTCAGAAGG-AAAAGGATGAATTTTGATCTTTATTTTTATTTGC  247
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATATACTTCAGAAGGAAAAAGGATGAATTTTGATCTTTATTTTTATTTGC  247

seq1  AAGTTTCCTTAGACTCATTCCCATGATCTTAAATGAGTTTGTTTTCTCCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCCTTAGACTCATTCCCATGATCTTAAATGAGTTTGTTTTCTCCT  297

seq1  TGTATCTCTTTCCTCTAGAATGACCCTATTAAAATACTTCCTCACCAAAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTCTTTCCTCTAGAATGACCCTATTAAAATACTTCCTCACCAAAC  347

seq1  TGCACAATCCTTCCTCTAACATGGGTATCATCTAAATTAGACATTCACCG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAATCCTTCCTCTAACATGGGTATCATCTAAATTAGACATTCACCG  397

seq1  AAGAGGTACAGAAGGCCTTTTTGATCTTGGTTACTCATATAGACACAATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTACAGAAGGCCTTTTTGATCTTGGTTACTCATATAGACACAATG  447

seq1  AGGCTATATGATTTTGACAAGCTTCCAATCCAAATGTCCAAATTGGAATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATATGATTTTGACAAGCTTCCAATCCAAATGTCCAAATTGGAATA  497

seq1  AAAACACATCCATTGGTTCCAGATTTGGACACTTTTCCCTGGTACCTTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACATCCATTGGTTCCAGATTTGGACACTTTTCCCTGGTACCTTTT  547

seq1  GGTTGAGATTTGGGATGTGGTTTGAAAAGCCACTAACTTGTCTAAGTCCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAGATTTGGGATGTGGTTTGAAAAGCCACTAACTTGTCTAAGTCCA  597

seq1  CTGGGGTTCTACAAGGGTTAGAGGAATCTCCCAGAATGTTCTTATGGTAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTTCTACAAGGGTTAGAGGAATCTCCCAGAATGTTCTTATGGTAC  647

seq1  ACAGTCCTTTCAGAGTTCAACCTATAAGATCCAAAAATAATAGAGCACTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCTTTCAGAGTTCAACCTATAAGATCCAAAAATAATAGAGCACTG  697

seq1  AATTTGACCTTTGTCATTCAGTCCGCTCCTGATACTCACAATAAGCTCCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGACCTTTGTCATTCAGTCCGCTCCTGATACTCACAATAAGCTCCA  747

seq1  AAAGCTAGAAGGTTTTGCTGGCATAAATACCTTCCAGCTTATGAAGACGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAGAAGGTTTTGCTGGCATAAATACCTTCCAGCTTATGAAGACGT  797

seq1  TCCAACAGTTTTCAATGACTGACATGCTGAGAAATATAAAGAAGCTGCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAGTTTTCAATGACTGACATGCTGAGAAATATAAAGAAGCTGCAA  847

seq1  TGGCCTATTGAGCTACTTGAAAACAGGTAAAAATCATGATGACTGCACTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTATTGAGCTACTTGAAAACAGGTAAAAATCATGATGACTGCACTC  897

seq1  TAGTAAGTTCTTTTCAAGCATTCAACTGCTAGTACTCAGTAAAGGGATCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGTTCTTTTCAAGCATTCAACTGCTAGTACTCAGTAAAGGGATCA  947

seq1  CCAATTATCAAAAACAGACACTGCAGAAATGAATGTTCAAGATGTCCCTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTATCAAAAACAGACACTGCAGAAATGAATGTTCAAGATGTCCCTG  997

seq1  AAGAGTAGTAGACCCTGCCAAACCATGGGGAGCTAGAGAACAAATTGGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAGTAGACCCTGCCAAACCATGGGGAGCTAGAGAACAAATTGGAA  1047

seq1  TGAAGCAGGCAGAATTC  1064
      |||||||||||||||||
seq2  TGAAGCAGGCAGAATTC  1064