BAC Information

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BAC

Clone NameB6Ng01-265P17
Chromosome2 (Build37)
Map Location 100,666,533 - 100,667,639
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668702, LOC100042907, LOC241572, LOC668705
Downstream geneB230118H07Rik, Rag2, Rag1, LOC100042930, Traf6, 2600010E01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265P17.bB6Ng01-265P17.g
ACCGA069491GA069492
length5511,099
definitionB6Ng01-265P17.b B6Ng01-265P17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagtaatcagacactactgcatgtgccagcaagatttctttgaatggacc
ctgatataccattctcgtgtgaggttatgccagtgcctggaaaagacaga
agtggatgctcacactcatctattggatggaacacagcgcccccagtgga
ggagctagagaaaatacccaaggagctaaaggggtttgcagccctatagg
aagaataacaatatgaactaaccagtatcccccagagcttgtgtctccag
ctgcatatgtagcagaagatggcctagttggtcatcactggggagagaga
ccccttggtcttgcaaactttatatgccccaatacaggggaacgccaggg
ccaagaagtgggagtggttgggtaggggagcagggcagggggagggtata
gggaactttcaggatagcatttgaaacgtaaataaagaaaatatctaata
aaaaaaatcagctggaatgctttggtgttttcatgtctataaagggatat
aatttccccacccatccagatggttagatacaatataatttagattatat
c

gaattccttgtgagttagtgagcttggggacaactcagtgcttggaacta
agggataaagcaggactctaactagtgtgaatgtaaatttagagaaggca
ctactgtcactgcttatgctacaacaggcctagtatatggtgctggggtt
tcttatctaaccatgaacataggaaaatagaaaggtcaaaataaagataa
ataaatctagaatataaaatctgagcaataaaccaatacacacatggctg
ataaaatatgccacatataaatataagccaaaaagtatataaaggaaaac
tgagctaatactgtaactgaatgatacactttgccaagacttggttttta
aataagtattttctgtcagagttacatccaagaatatgcataaatttctc
agatttgaccttgataattatatctacaaacaatcttagcagatgtcaca
tttaataggaaaatgctttccacagagactgcatgtttgctaacaaccct
gtaacattaattttagctcccacagttatatacaaaaatcaaagggaaaa
cattaaaaggcctaatgattagatgggaaaaatgtagtttccagcagtca
acgatgacaaggatgtccatgcagaaaaaagtaaaagcaaatactttcca
gaaaacttttagaaatagcaaattaatttttgtaagattgccaaacattg
ggtcagtgagttggctcagctgttaaagttgtgtgtgctcctgcagtaga
tcagaccagggatcctcacggccacttcagccagttcacacaagtctgta
actccagttccaaggactctgatgcccttctcacctaaagatatccacat
gcatgttcatacaacacacagacacaccaacacatcacacttatggatat
aaatttgaaaatcaaagcatactttagagaacaaaaatagttctaagcgt
aaggatttttatacaagtaacaacttagtttccatgcttagtcaccataa
taaccactaaaatgattgttatattaatgtcataaataacactactacat
gagaaaagtaatttgaagaaagcaacctccatcacaaaacgtagcagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_100666533_100667639
seq2: B6Ng01-265P17.g_68_1166

seq1  GAATTCCTTGTGAGTTAGTGAGCTTGGGGACAACTCAGTGCTTGGAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTGAGTTAGTGAGCTTGGGGACAACTCAGTGCTTGGAACTA  50

seq1  AGGGATAAAGCAGGACTCTAACTAGTGTGAATGTAAATTTAGAGAAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATAAAGCAGGACTCTAACTAGTGTGAATGTAAATTTAGAGAAGGCA  100

seq1  CTACTGTCACTGCTTATGCTACAACAGGCCTAGTATATGGTGCTGGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTCACTGCTTATGCTACAACAGGCCTAGTATATGGTGCTGGGGTT  150

seq1  TCTTATCTAACCATGAACATAGGAAAATAGAAAGGTCAAAATAAAGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCTAACCATGAACATAGGAAAATAGAAAGGTCAAAATAAAGATAA  200

seq1  ATAAATCTAGAATATAAAATCTGAGCAATAAACCAATACACACATGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTAGAATATAAAATCTGAGCAATAAACCAATACACACATGGCTG  250

seq1  ATAAAATATGCCACATATAAATATAAGCCAAAAAGTATATAAAGGAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATATGCCACATATAAATATAAGCCAAAAAGTATATAAAGGAAAAC  300

seq1  TGAGCTAATACTGTAACTGAATGATACACTTTGCCAAGACTTGGTTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTAATACTGTAACTGAATGATACACTTTGCCAAGACTTGGTTTTTA  350

seq1  AATAAGTATTTTCTGTCAGAGTTACATCCAAGAATATGCATAAATTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTATTTTCTGTCAGAGTTACATCCAAGAATATGCATAAATTTCTC  400

seq1  AGATTTGACCTTGATAATTATATCTACAAACAATCTTAGCAGATGTCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGACCTTGATAATTATATCTACAAACAATCTTAGCAGATGTCACA  450

seq1  TTTAATAGGAAAATGCTTTCCACAGAGACTGCATGTTTGCTAACAACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAGGAAAATGCTTTCCACAGAGACTGCATGTTTGCTAACAACCCT  500

seq1  GTAACATTAATTTTAGCTCCCACAGTTATATACAAAAATCAAAGGGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACATTAATTTTAGCTCCCACAGTTATATACAAAAATCAAAGGGAAAA  550

seq1  CATTAAAAGGCCTAATGATTAGATGGGAAAAATGTAGTTTCCAGCAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAGGCCTAATGATTAGATGGGAAAAATGTAGTTTCCAGCAGTCA  600

seq1  ACGATGACAAGGATGTCCATGCAGAAAAAAGTAAAAGCAAATACTTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATGACAAGGATGTCCATGCAGAAAAAAGTAAAAGCAAATACTTTCCA  650

seq1  GAAAACTTTTAGAAATAGCAAATTAATTTTTGTAAGATTGCCAAACATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTTTTAGAAATAGCAAATTAATTTTTGTAAGATTGCCAAACATTG  700

seq1  GGTCAGTGAGTTGGCTCAGCTGTTAAAGTTGTGTGTGCTCCTGCAGTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTGAGTTGGCTCAGCTGTTAAAGTTGTGTGTGCTCCTGCAGTAGA  750

seq1  TCAGACCAGGGATCCTCACGGCCACTTCAGCCAGTTCACACAAGTCTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACCAGGGATCCTCACGGCCACTTCAGCCAGTTCACACAAGTCTGTA  800

seq1  ACTCCAGTTCCAAGGACTCTGATGCCCTTCTCACCTAAAGATATCCACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGTTCCAAGGACTCTGATGCCCTTCTCACCTAAAGATATCCACAT  850

seq1  GCATGTTCATACAACACACAGACACACCAACACATCACACTTATGGATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTCATACAACACACAGACACACCAACACATCACACTTATGGATAT  900

seq1  AAATTTGAAAATCAAAGCATACTTTAGAGAAC-AAAATAGTTCTAAGCGT  949
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAATTTGAAAATCAAAGCATACTTTAGAGAACAAAAATAGTTCTAAGCGT  950

seq1  AAGGA-TTTTATACAAGTAACAACTTAGTTTCCATGCTTAGTCAACCAAT  998
      ||||| ||||||||||||||||||||||||||||||||||||||  | ||
seq2  AAGGATTTTTATACAAGTAACAACTTAGTTTCCATGCTTAGTCA--CCAT  998

seq1  AATAACCACTAAAATGATTTGTTATAATTTAAATGTCATAAATAACACTA  1048
      ||||||||||||||||| ||||||||   | |||||||||||||||||| 
seq2  AATAACCACTAAAATGA-TTGTTATA---TTAATGTCATAAATAACACT-  1043

seq1  ACTACATGAGAAAAAGTTAAATTTAAAGAAAGCAAACTTCATCACAAAAC  1098
      |||||||||| ||||||  ||||| |||||||||| || |||||||||||
seq2  ACTACATGAG-AAAAGT--AATTTGAAGAAAGCAACCTCCATCACAAAAC  1090

seq1  GTAGCAGTG  1107
      |||||||||
seq2  GTAGCAGTG  1099


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